source: src/UIElements/Views/Qt4/QtFragmentList.cpp@ df3f2f

Action_Thermostats Add_AtomRandomPerturbation Add_FitFragmentPartialChargesAction Add_RotateAroundBondAction Add_SelectAtomByNameAction Added_ParseSaveFragmentResults AddingActions_SaveParseParticleParameters Adding_Graph_to_ChangeBondActions Adding_MD_integration_tests Adding_ParticleName_to_Atom Adding_StructOpt_integration_tests AtomFragments Automaking_mpqc_open AutomationFragmentation_failures Candidate_v1.5.4 Candidate_v1.6.0 Candidate_v1.6.1 ChangeBugEmailaddress ChangingTestPorts ChemicalSpaceEvaluator CombiningParticlePotentialParsing Combining_Subpackages Debian_Package_split Debian_package_split_molecuildergui_only Disabling_MemDebug Docu_Python_wait EmpiricalPotential_contain_HomologyGraph EmpiricalPotential_contain_HomologyGraph_documentation Enable_parallel_make_install Enhance_userguide Enhanced_StructuralOptimization Enhanced_StructuralOptimization_continued Example_ManyWaysToTranslateAtom Exclude_Hydrogens_annealWithBondGraph FitPartialCharges_GlobalError Fix_BoundInBox_CenterInBox_MoleculeActions Fix_ChargeSampling_PBC Fix_ChronosMutex Fix_FitPartialCharges Fix_FitPotential_needs_atomicnumbers Fix_ForceAnnealing Fix_IndependentFragmentGrids Fix_ParseParticles Fix_ParseParticles_split_forward_backward_Actions Fix_PopActions Fix_QtFragmentList_sorted_selection Fix_Restrictedkeyset_FragmentMolecule Fix_StatusMsg Fix_StepWorldTime_single_argument Fix_Verbose_Codepatterns Fix_fitting_potentials Fixes ForceAnnealing_goodresults ForceAnnealing_oldresults ForceAnnealing_tocheck ForceAnnealing_with_BondGraph ForceAnnealing_with_BondGraph_continued ForceAnnealing_with_BondGraph_continued_betteresults ForceAnnealing_with_BondGraph_contraction-expansion FragmentAction_writes_AtomFragments FragmentMolecule_checks_bonddegrees GeometryObjects Gui_Fixes Gui_displays_atomic_force_velocity ImplicitCharges IndependentFragmentGrids IndependentFragmentGrids_IndividualZeroInstances IndependentFragmentGrids_IntegrationTest IndependentFragmentGrids_Sole_NN_Calculation JobMarket_RobustOnKillsSegFaults JobMarket_StableWorkerPool JobMarket_unresolvable_hostname_fix MoreRobust_FragmentAutomation ODR_violation_mpqc_open PartialCharges_OrthogonalSummation PdbParser_setsAtomName PythonUI_with_named_parameters QtGui_reactivate_TimeChanged_changes Recreated_GuiChecks Rewrite_FitPartialCharges RotateToPrincipalAxisSystem_UndoRedo SaturateAtoms_findBestMatching SaturateAtoms_singleDegree StoppableMakroAction Subpackage_CodePatterns Subpackage_JobMarket Subpackage_LinearAlgebra Subpackage_levmar Subpackage_mpqc_open Subpackage_vmg Switchable_LogView ThirdParty_MPQC_rebuilt_buildsystem TrajectoryDependenant_MaxOrder TremoloParser_IncreasedPrecision TremoloParser_MultipleTimesteps TremoloParser_setsAtomName Ubuntu_1604_changes stable
Last change on this file since df3f2f was f01769, checked in by Frederik Heber <heber@…>, 9 years ago

Replaced World::getAtom() wherever possible by const version.

  • some AtomSet member functions now have const atom ptr instead of atom ptr.
  • molecule can return const and non-const AtomSet.
  • added FromIdToConstAtom to allow iterate through atoms in molecule (which are stored by id, not by ptr) in const fashion.
  • in molecule::isInMolecule() is now const, ::CopyMolecule..() is non-const (because copying involves father atom who is stored non-const).
  • Property mode set to 100644
File size: 6.8 KB
Line 
1/*
2 * Project: MoleCuilder
3 * Description: creates and alters molecular systems
4 * Copyright (C) 2013 Frederik Heber. All rights reserved.
5 *
6 *
7 * This file is part of MoleCuilder.
8 *
9 * MoleCuilder is free software: you can redistribute it and/or modify
10 * it under the terms of the GNU General Public License as published by
11 * the Free Software Foundation, either version 2 of the License, or
12 * (at your option) any later version.
13 *
14 * MoleCuilder is distributed in the hope that it will be useful,
15 * but WITHOUT ANY WARRANTY; without even the implied warranty of
16 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
17 * GNU General Public License for more details.
18 *
19 * You should have received a copy of the GNU General Public License
20 * along with MoleCuilder. If not, see <http://www.gnu.org/licenses/>.
21 */
22
23/*
24 * QtFragmentList.cpp
25 *
26 * Created on: Sep 03, 2013
27 * Author: heber
28 */
29
30// include config.h
31#ifdef HAVE_CONFIG_H
32#include <config.h>
33#endif
34
35#include "Views/Qt4/QtFragmentList.hpp"
36
37#include <iterator>
38#include <iostream>
39
40#include <QAbstractItemView>
41
42#include "CodePatterns/MemDebug.hpp"
43
44#include "CodePatterns/Log.hpp"
45
46#include "Descriptors/AtomIdDescriptor.hpp"
47#include "Formula.hpp"
48#include "Fragmentation/KeySetsContainer.hpp"
49#include "Fragmentation/Summation/IndexSetContainer.hpp"
50#include "Fragmentation/Summation/Containers/FragmentationResultContainer.hpp"
51#include "Fragmentation/Summation/Containers/MPQCData.hpp"
52#include "World.hpp"
53
54using namespace std;
55
56const int QtFragmentList::COLUMNCOUNT = COLUMNTYPES_MAX;
57const char *QtFragmentList::COLUMNNAMES[QtFragmentList::COLUMNCOUNT]={"Number","KeySet","Formula","Energy value","Energy contribution"};
58
59QtFragmentList::QtFragmentList(QWidget * _parent) :
60 QTreeWidget (_parent),
61 Observer("QtFragmentList")
62{
63 setColumnCount(COLUMNCOUNT);
64 QStringList header;
65 for(int i=0; i<COLUMNCOUNT;++i)
66 header << COLUMNNAMES[i];
67 setHeaderLabels(header);
68
69 setSelectionMode( MultiSelection );
70
71 dirty = true;
72 clearing = false;
73
74 refill();
75
76 FragmentationResultContainer &fragments =
77 FragmentationResultContainer::getInstance();
78 fragments.signOn(this);
79
80 connect(this,SIGNAL(itemSelectionChanged()),this,SLOT(rowSelected()));
81 connect(this,SIGNAL(changed()),this,SLOT(update()));
82}
83
84QtFragmentList::~QtFragmentList()
85{
86 FragmentationResultContainer &fragments =
87 FragmentationResultContainer::getInstance();
88 fragments.signOff(this);
89}
90
91void QtFragmentList::update(Observable *publisher) {
92
93 dirty = true;
94
95 // force an update from Qt...
96 clearing = true;
97 clear();
98 clearing = false;
99 emit changed(); // doesn't work!?!
100}
101
102void QtFragmentList::refill()
103{
104 clearing = true;
105 FragmentationResultContainer &fragments =
106 FragmentationResultContainer::getInstance();
107
108 // clear everything
109 FragmentSelection.clear();
110 indexsets.clear();
111 clear();
112
113 size_t count = 0;
114 const IndexSetContainer keysets(fragments.getKeySets());
115 const FragmentationResultContainer::shortrangedata_t &shortrange = fragments.getShortRangeResults();
116 const FragmentationShortRangeResults::summedshortrange_t &summedshortrange = fragments.getShortRangeSummedResults();
117 IndexSetContainer::Container_t::const_iterator keyiter = keysets.getContainer().begin();
118 FragmentationResultContainer::shortrangedata_t::const_iterator resultiter = shortrange.begin();
119 for (;(keyiter != keysets.getContainer().end()) && (resultiter != shortrange.end());
120 ++keyiter,++resultiter,++count) {
121
122 QTreeWidgetItem *treeItem = new QTreeWidgetItem(this);
123 treeItem->setText(NUMBER, QString::number(count));
124 {
125 std::stringstream output;
126 output << **keyiter;
127 treeItem->setText(KEYSET, QString(output.str().c_str()));
128 }
129 {
130 std::stringstream output;
131 Formula formula;
132 for (IndexSet::const_iterator indexiter = (*keyiter)->begin();
133 indexiter != (*keyiter)->end();
134 ++indexiter) {
135 const atom * const _atom = const_cast<const World &>(World::getInstance()).
136 getAtom(AtomById(*indexiter));
137 if (_atom != NULL)
138 formula.addElements(_atom->getElementNo(), 1);
139 else
140 ELOG(2, "QtFragmentList::refill() - Could not find id " << *indexiter << " for formula.");
141 }
142 output << formula.toString();
143 treeItem->setText(FORMULA, QString(output.str().c_str()));
144 }
145 if (summedshortrange.empty()) {
146 {
147 std::stringstream output;
148 output << resultiter->second.energies.total;
149 treeItem->setText(ENERGYVALUE, QString(output.str().c_str()));
150 }
151 {
152 std::stringstream output;
153 output << "";
154 treeItem->setText(ENERGYCONTRIBUTION, QString(output.str().c_str()));
155 }
156 } else {
157 FragmentationShortRangeResults::summedshortrange_t::const_iterator sumresiter =
158 summedshortrange.find(*keyiter);
159 ASSERT( sumresiter != summedshortrange.end(),
160 "QtFragmentList::refill() - "+toString(*keyiter)+" not present in summed results.");
161 {
162 std::stringstream output;
163 output << sumresiter->second.first.energies.total;
164 treeItem->setText(ENERGYVALUE, QString(output.str().c_str()));
165 }
166 {
167 std::stringstream output;
168 output << sumresiter->second.second.energies.total;
169 treeItem->setText(ENERGYCONTRIBUTION, QString(output.str().c_str()));
170 }
171 }
172 FragmentSelection.push_back(treeItem->isSelected());
173 indexsets.push_back( **keyiter );
174 }
175 dirty = false;
176 clearing = false;
177}
178
179void QtFragmentList::paintEvent(QPaintEvent * event)
180{
181 if (dirty)
182 refill();
183 QTreeWidget::paintEvent(event);
184}
185
186void QtFragmentList::subjectKilled(Observable *publisher)
187{
188 // as a new instance should always already be present ... just sign on
189 FragmentationResultContainer &fragments =
190 FragmentationResultContainer::getInstance();
191 fragments.signOn(this);
192}
193
194
195void QtFragmentList::rowSelected()
196{
197 //std::cout << "rowSelected\n";
198 // unselect
199 for (int i=0;i<topLevelItemCount();++i) {
200 QTreeWidgetItem *item = topLevelItem(i);
201 bool newSelection = item->isSelected();
202 if (newSelection != FragmentSelection[i]){
203 // get the keyset and select the specific atoms
204 if (!newSelection)
205 for (IndexSet::const_iterator iter = indexsets[i].begin();
206 iter != indexsets[i].end();
207 ++iter)
208 World::getInstance().unselectAtom(*iter);
209 }
210 }
211 // select all
212 for (int i=0;i<topLevelItemCount();++i) {
213 QTreeWidgetItem *item = topLevelItem(i);
214 bool newSelection = item->isSelected();
215 if (newSelection != FragmentSelection[i]){
216 FragmentSelection[i] = newSelection;
217 // get the keyset and select the specific atoms
218 if (newSelection)
219 for (IndexSet::const_iterator iter = indexsets[i].begin();
220 iter != indexsets[i].end();
221 ++iter)
222 World::getInstance().selectAtom(*iter);
223 }
224 }
225}
226
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