| 1 | /* | 
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| 2 | * Project: MoleCuilder | 
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| 3 | * Description: creates and alters molecular systems | 
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| 4 | * Copyright (C)  2010-2012 University of Bonn. All rights reserved. | 
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| 5 | * | 
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| 6 | * | 
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| 7 | *   This file is part of MoleCuilder. | 
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| 8 | * | 
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| 9 | *    MoleCuilder is free software: you can redistribute it and/or modify | 
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| 10 | *    it under the terms of the GNU General Public License as published by | 
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| 11 | *    the Free Software Foundation, either version 2 of the License, or | 
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| 12 | *    (at your option) any later version. | 
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| 13 | * | 
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| 14 | *    MoleCuilder is distributed in the hope that it will be useful, | 
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| 15 | *    but WITHOUT ANY WARRANTY; without even the implied warranty of | 
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| 16 | *    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | 
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| 17 | *    GNU General Public License for more details. | 
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| 18 | * | 
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| 19 | *    You should have received a copy of the GNU General Public License | 
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| 20 | *    along with MoleCuilder.  If not, see <http://www.gnu.org/licenses/>. | 
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| 21 | */ | 
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| 22 |  | 
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| 23 | /* | 
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| 24 | * TextWindow.cpp | 
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| 25 | * | 
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| 26 | *  Created on: Jan 7, 2010 | 
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| 27 | *      Author: crueger | 
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| 28 | */ | 
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| 29 |  | 
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| 30 | // include config.h | 
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| 31 | #ifdef HAVE_CONFIG_H | 
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| 32 | #include <config.h> | 
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| 33 | #endif | 
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| 34 |  | 
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| 35 | //#include "CodePatterns/MemDebug.hpp" | 
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| 36 |  | 
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| 37 | #include <boost/bind.hpp> | 
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| 38 | #include <boost/shared_ptr.hpp> | 
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| 39 |  | 
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| 40 | #include "Menu/TextMenu/TextMenu.hpp" | 
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| 41 | #include "Menu/TextMenu/TxMenu.hpp" | 
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| 42 | #include "Menu/TextMenu/ActionMenuItem.hpp" | 
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| 43 | #include "Menu/TextMenu/SeparatorMenuItem.hpp" | 
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| 44 | #include "Menu/TextMenu/DisplayMenuItem.hpp" | 
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| 45 | #include "Menu/TextMenu/SubMenuItem.hpp" | 
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| 46 | #include "TextUI/TextStatusIndicator.hpp" | 
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| 47 | #include "TextUI/TextWindow.hpp" | 
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| 48 | #include "Actions/MethodAction.hpp" | 
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| 49 | #include "Actions/ErrorAction.hpp" | 
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| 50 | #include "Actions/ActionQueue.hpp" | 
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| 51 | #include "Actions/ActionTrait.hpp" | 
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| 52 | #include "Element/element.hpp" | 
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| 53 | #include "Element/periodentafel.hpp" | 
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| 54 | #include "molecule.hpp" | 
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| 55 | #include "Parser/ChangeTracker.hpp" | 
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| 56 | #include "Views/StreamStringView.hpp" | 
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| 57 | #include "Views/MethodStringView.hpp" | 
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| 58 | #include "World.hpp" | 
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| 59 |  | 
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| 60 | #include "Helpers/defs.hpp" | 
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| 61 | #include "CodePatterns/Log.hpp" | 
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| 62 | #include "CodePatterns/Verbose.hpp" | 
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| 63 |  | 
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| 64 | #include <iostream> | 
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| 65 | #include <map> | 
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| 66 |  | 
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| 67 | using namespace MoleCuilder; | 
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| 68 |  | 
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| 69 | // TODO: see what code can be moved to a base class for Graphic and Text Windows | 
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| 70 | TextWindow::TextWindow() | 
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| 71 | { | 
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| 72 | // build the main menu | 
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| 73 | main_menu = new TextMenu<TxMenu>(std::cout, ""); | 
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| 74 | // reserve s for save and q for quite | 
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| 75 | main_menu->reserveShortcut('s', "output"); | 
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| 76 | main_menu->reserveShortcut('q', "quit"); | 
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| 77 |  | 
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| 78 | moleculeView = new StreamStringView(boost::bind(&TextWindow::Enumerate,this,_1)); | 
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| 79 | new DisplayMenuItem(main_menu->getMenuInstance(),moleculeView,"Molecule List"); | 
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| 80 |  | 
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| 81 | new SeparatorMenuItem(main_menu->getMenuInstance()); | 
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| 82 |  | 
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| 83 | main_menu->init(); | 
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| 84 |  | 
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| 85 | new SeparatorMenuItem(main_menu->getMenuInstance()); | 
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| 86 |  | 
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| 87 | // save has reserved key 's' | 
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| 88 | //  const Action &saveConfigAction = ActionQueue::getInstance().getActionByName("output"); | 
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| 89 | new ActionMenuItem('s',"save current setup to config files",main_menu->getMenuInstance(),"output"); | 
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| 90 |  | 
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| 91 | // create a specific quit action for this UI and store in registry | 
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| 92 | ActionTrait quitTrait(OptionTrait("quit", &typeid(void), "quits the program")); | 
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| 93 | quitAction = new MethodAction(quitTrait,boost::bind(&TxMenu::doQuit,main_menu->getMenuInstance())); | 
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| 94 | MoleCuilder::ActionQueue::getInstance().registerAction(quitAction); | 
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| 95 | new ActionMenuItem('q',"quit",main_menu->getMenuInstance(),"quit"); | 
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| 96 |  | 
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| 97 | // Add status indicators etc... | 
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| 98 | statusIndicator = new TextStatusIndicator(); | 
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| 99 | } | 
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| 100 |  | 
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| 101 | void TextWindow::Enumerate(std::ostream *out) | 
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| 102 | { | 
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| 103 | periodentafel *periode = World::getInstance().getPeriode(); | 
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| 104 | std::vector<molecule *> allmolecules = World::getInstance().getAllMolecules(); | 
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| 105 | std::map<atomicNumber_t,unsigned int> counts; | 
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| 106 | double size=0; | 
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| 107 | Vector Origin; | 
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| 108 |  | 
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| 109 | // header | 
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| 110 | (*out) << "Index\tName\t\tAtoms\tFormula\tCenter\tSize" << endl; | 
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| 111 | (*out) << "-----------------------------------------------" << endl; | 
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| 112 | if (allmolecules.size() == 0) | 
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| 113 | (*out) << "\tNone" << endl; | 
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| 114 | else { | 
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| 115 | Origin.Zero(); | 
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| 116 | for (std::vector<molecule *>::const_iterator ListRunner = allmolecules.begin(); | 
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| 117 | ListRunner != allmolecules.end(); ListRunner++) { | 
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| 118 | // count atoms per element and determine size of bounding sphere | 
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| 119 | size=0.; | 
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| 120 | const molecule *MolRunner = *ListRunner; | 
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| 121 | for (molecule::const_iterator iter = MolRunner->begin(); iter != MolRunner->end(); ++iter) { | 
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| 122 | counts[(*iter)->getType()->getAtomicNumber()]++; | 
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| 123 | if ((*iter)->DistanceSquared(Origin) > size) | 
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| 124 | size = (*iter)->DistanceSquared(Origin); | 
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| 125 | } | 
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| 126 | // output Index, Name, number of atoms, chemical formula | 
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| 127 | (*out) << (MolRunner->ActiveFlag ? "*" : " ") << MolRunner->IndexNr << "\t" << MolRunner->name << "\t\t" << MolRunner->getAtomCount() << "\t"; | 
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| 128 |  | 
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| 129 | std::map<atomicNumber_t,unsigned int>::reverse_iterator iter; | 
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| 130 | for(iter=counts.rbegin(); iter!=counts.rend();++iter){ | 
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| 131 | atomicNumber_t Z =(*iter).first; | 
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| 132 | (*out) << periode->FindElement(Z)->getSymbol() << (*iter).second; | 
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| 133 | } | 
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| 134 | // Center and size | 
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| 135 | Vector Center = MolRunner->DetermineCenterOfAll(); | 
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| 136 | (*out) << "\t" << Center << "\t" << sqrt(size) << endl; | 
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| 137 | } | 
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| 138 | } | 
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| 139 | } | 
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| 140 |  | 
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| 141 | TextWindow::~TextWindow() | 
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| 142 | { | 
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| 143 | delete moleculeView; | 
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| 144 | delete statusIndicator; | 
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| 145 | delete main_menu; | 
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| 146 | } | 
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| 147 |  | 
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| 148 | void TextWindow::display() { | 
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| 149 | main_menu->display(); | 
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| 150 | } | 
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| 151 |  | 
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