[0070aa] | 1 | /*
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| 2 | * Project: MoleCuilder
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| 3 | * Description: creates and alters molecular systems
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| 4 | * Copyright (C) 2015 Frederik Heber. All rights reserved.
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| 5 | *
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| 6 | *
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| 7 | * This file is part of MoleCuilder.
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| 8 | *
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| 9 | * MoleCuilder is free software: you can redistribute it and/or modify
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| 10 | * it under the terms of the GNU General Public License as published by
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| 11 | * the Free Software Foundation, either version 2 of the License, or
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| 12 | * (at your option) any later version.
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| 13 | *
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| 14 | * MoleCuilder is distributed in the hope that it will be useful,
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| 15 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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| 16 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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| 17 | * GNU General Public License for more details.
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| 18 | *
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| 19 | * You should have received a copy of the GNU General Public License
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| 20 | * along with MoleCuilder. If not, see <http://www.gnu.org/licenses/>.
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| 21 | */
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| 22 |
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| 23 | /*
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| 24 | * QtObservedAtom.cpp
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| 25 | *
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| 26 | * Created on: Oct 28, 2015
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| 27 | * Author: heber
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| 28 | */
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| 29 |
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| 30 |
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| 31 | // include config.h
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| 32 | #ifdef HAVE_CONFIG_H
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| 33 | #include <config.h>
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| 34 | #endif
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| 35 |
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| 36 | #include "QtObservedAtom.hpp"
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| 37 |
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[65c323] | 38 | #include "UIElements/Qt4/InstanceBoard/QtObservedInstanceBoard.hpp"
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| 39 |
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[0070aa] | 40 | #include "CodePatterns/MemDebug.hpp"
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| 41 |
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[65c323] | 42 | #include <boost/assign.hpp>
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| 43 |
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| 44 | #include "Atom/atom.hpp"
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| 45 | #include "Bond/bond.hpp"
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| 46 | #include "Descriptors/AtomIdDescriptor.hpp"
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| 47 | #include "Element/element.hpp"
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| 48 | #include "World.hpp"
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| 49 |
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[494478] | 50 | #include "UIElements/Qt4/InstanceBoard/ObservedValue_wCallback.hpp"
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[65c323] | 51 |
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| 52 | using namespace boost::assign;
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| 53 |
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| 54 | static const Observable::channels_t getAtomBondsChannels()
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| 55 | {
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| 56 | Observable::channels_t channels;
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| 57 | channels += AtomObservable::BondsAdded, AtomObservable::BondsRemoved;
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| 58 | return channels;
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| 59 | }
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| 60 |
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| 61 | static const Observable::channels_t getAllObservedChannels()
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| 62 | {
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| 63 | Observable::channels_t channels;
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| 64 | channels +=
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| 65 | AtomObservable::IndexChanged,
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| 66 | AtomObservable::BondsAdded,
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[fe493f] | 67 | AtomObservable::BondsRemoved,
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| 68 | AtomObservable::MoleculeChanged,
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| 69 | AtomObservable::NameChanged,
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| 70 | AtomObservable::ElementChanged,
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[9e9100] | 71 | AtomObservable::PositionChanged,
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| 72 | AtomObservable::SelectionChanged;
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[65c323] | 73 | return channels;
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| 74 | }
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| 75 |
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| 76 | // static entities
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| 77 | const Observable::channels_t
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| 78 | QtObservedAtom::AtomIndexChannels(1, AtomObservable::IndexChanged);
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| 79 | const Observable::channels_t
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[fe493f] | 80 | QtObservedAtom::AtomBondsChannels(getAtomBondsChannels());
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[65c323] | 81 | const Observable::channels_t
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| 82 | QtObservedAtom::AtomElementChannels(1, AtomObservable::ElementChanged);
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| 83 | const Observable::channels_t
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[fe493f] | 84 | QtObservedAtom::AtomMoleculeIndexChannels(1, AtomObservable::MoleculeChanged);
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| 85 | const Observable::channels_t
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| 86 | QtObservedAtom::AtomNameChannels(1, AtomObservable::NameChanged);
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| 87 | const Observable::channels_t
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| 88 | QtObservedAtom::AtomPositionChannels(1, AtomObservable::PositionChanged);
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[9e9100] | 89 | const Observable::channels_t
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| 90 | QtObservedAtom::AtomSelectedChannels(1, AtomObservable::SelectionChanged);
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[65c323] | 91 |
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[98c35c] | 92 | QtObservedAtom::QtObservedAtom(
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[62a0ee] | 93 | const atomId_t _id,
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| 94 | const atom * const _atom,
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[65c323] | 95 | QtObservedInstanceBoard &_board,
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[98c35c] | 96 | QWidget * _parent) :
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[0070aa] | 97 | QWidget(_parent),
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[98c35c] | 98 | Observer("QtObservedAtom"),
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[65c323] | 99 | subjectKilledCount(0),
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| 100 | AllsignedOnChannels(getAllObservedChannels().size()),
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| 101 | signedOffChannels(0),
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| 102 | owner(NULL),
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[1c0961] | 103 | oldId(_id),
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[65c323] | 104 | board(_board),
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[04c3a3] | 105 | BoardIsGone(false),
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[62a0ee] | 106 | ObservedValues(QtObservedAtom::MAX_ObservedTypes)
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[65c323] | 107 | {
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[62a0ee] | 108 | boost::function<void (const atomId_t)> atomSubjectKilled(
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| 109 | boost::bind(&QtObservedAtom::countValuesSubjectKilled,
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| 110 | boost::ref(*this),
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| 111 | _1));
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| 112 | initObservedValues( ObservedValues, _id, _atom, atomSubjectKilled);
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| 113 |
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| 114 | // activating Observer is done by ObservedValueContainer when it's inserted
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[65c323] | 115 | }
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[0070aa] | 116 |
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| 117 | QtObservedAtom::~QtObservedAtom()
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[65c323] | 118 | {
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[04c3a3] | 119 | boost::any_cast<ObservedValue_wCallback<atomId_t> *>(ObservedValues[AtomIndex])->noteCallBackIsGone();
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| 120 | boost::any_cast<ObservedValue_wCallback<ListOfBonds_t, atomId_t> *>(ObservedValues[AtomBonds])->noteCallBackIsGone();
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| 121 | boost::any_cast<ObservedValue_wCallback<atomicNumber_t, atomId_t> *>(ObservedValues[AtomElement])->noteCallBackIsGone();
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| 122 | boost::any_cast<ObservedValue_wCallback<moleculeId_t, atomId_t> *>(ObservedValues[AtomMoleculeIndex])->noteCallBackIsGone();
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| 123 | boost::any_cast<ObservedValue_wCallback<std::string, atomId_t> *>(ObservedValues[AtomName])->noteCallBackIsGone();
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| 124 | boost::any_cast<ObservedValue_wCallback<Vector, atomId_t> *>(ObservedValues[AtomPosition])->noteCallBackIsGone();
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[9e9100] | 125 | boost::any_cast<ObservedValue_wCallback<bool, atomId_t> *>(ObservedValues[AtomSelected])->noteCallBackIsGone();
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[04c3a3] | 126 |
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[65c323] | 127 | deactivateObserver();
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| 128 | }
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| 129 |
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| 130 | const atom * const QtObservedAtom::getAtomConst(const atomId_t _id)
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| 131 | {
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| 132 | const atom * const _atom = const_cast<const World &>(World::getInstance()).
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| 133 | getAtom(AtomById(_id));
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| 134 | return _atom;
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| 135 | }
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| 136 |
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| 137 | atom * const QtObservedAtom::getAtom(const atomId_t _id)
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| 138 | {
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| 139 | atom * const _atom = World::getInstance().getAtom(AtomById(_id));
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| 140 | return _atom;
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| 141 | }
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| 142 |
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| 143 | atomId_t QtObservedAtom::updateIndex()
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| 144 | {
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| 145 | return const_cast<const World &>(World::getInstance()).lastChangedAtomId();
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| 146 | }
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| 147 |
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[fe493f] | 148 | QtObservedAtom::ListOfBonds_t QtObservedAtom::updateBonds(
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[65c323] | 149 | const boost::function<const atomId_t ()> &_getAtomIndex)
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| 150 | {
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[fe493f] | 151 | ListOfBonds_t ListOfBonds;
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[65c323] | 152 | const atom * const _atom = getAtomConst(_getAtomIndex());
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| 153 | if (_atom != NULL) {
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[fe493f] | 154 | // make sure bonds is up-to-date
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| 155 | const BondList ListBonds = _atom->getListOfBonds();
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| 156 | for (BondList::const_iterator iter = ListBonds.begin();
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| 157 | iter != ListBonds.end();
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| 158 | ++iter)
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| 159 | ListOfBonds.insert( ListOfBonds.end(), std::make_pair(
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| 160 | (*iter)->leftatom->getId(),
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| 161 | (*iter)->rightatom->getId()) );
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[65c323] | 162 | }
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[fe493f] | 163 | return ListOfBonds;
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[65c323] | 164 | }
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| 165 |
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| 166 | atomicNumber_t QtObservedAtom::updateElement(
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| 167 | const boost::function<const atomId_t ()> &_getAtomIndex)
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| 168 | {
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| 169 | const atom * const _atom = getAtomConst(_getAtomIndex());
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| 170 | if (_atom != NULL) {
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| 171 | return _atom->getElementNo();
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| 172 | } else {
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| 173 | return (atomicNumber_t)-1;
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| 174 | }
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| 175 | }
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| 176 |
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[fe493f] | 177 | moleculeId_t QtObservedAtom::updateMoleculeIndex(
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| 178 | const boost::function<const atomId_t ()> &_getAtomIndex)
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| 179 | {
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| 180 | const atom * const _atom = getAtomConst(_getAtomIndex());
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| 181 | if ((_atom != NULL) && (_atom->getMolecule() != NULL)) {
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| 182 | return _atom->getMolecule()->getId();
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| 183 | } else {
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| 184 | return (moleculeId_t)0;
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| 185 | }
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| 186 | }
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| 187 |
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| 188 | std::string QtObservedAtom::updateName(
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[65c323] | 189 | const boost::function<const atomId_t ()> &_getAtomIndex)
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| 190 | {
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| 191 | const atom * const _atom = getAtomConst(_getAtomIndex());
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| 192 | if (_atom != NULL) {
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[fe493f] | 193 | return _atom->getName();
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| 194 | } else {
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| 195 | return std::string("");
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| 196 | }
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| 197 | }
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| 198 |
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| 199 | Vector QtObservedAtom::updatePosition(
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| 200 | const boost::function<const atomId_t ()> &_getAtomIndex)
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| 201 | {
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| 202 | const atom * const _atom = getAtomConst(_getAtomIndex());
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| 203 | if (_atom != NULL) {
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| 204 | return _atom->getPosition();
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| 205 | } else {
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| 206 | return zeroVec;
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[65c323] | 207 | }
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| 208 | }
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[98c35c] | 209 |
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[9e9100] | 210 | bool QtObservedAtom::updateSelected(
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| 211 | const boost::function<const atomId_t ()> &_getAtomIndex)
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| 212 | {
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| 213 | const atom * const _atom = getAtomConst(_getAtomIndex());
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| 214 | if (_atom != NULL) {
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| 215 | return _atom->getSelected();
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| 216 | } else {
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| 217 | return false;
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| 218 | }
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| 219 | }
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| 220 |
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[98c35c] | 221 | void QtObservedAtom::update(Observable *publisher)
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[65c323] | 222 | {
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| 223 | ASSERT(0, "QtObservedAtom::update() - we are not signed on for global updates.");
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| 224 | }
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[98c35c] | 225 |
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| 226 | void QtObservedAtom::subjectKilled(Observable *publisher)
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[65c323] | 227 | {
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| 228 | ++signedOffChannels;
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| 229 |
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[62a0ee] | 230 | checkForRemoval();
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| 231 | }
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| 232 |
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| 233 | void QtObservedAtom::countValuesSubjectKilled(const atomId_t _id)
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| 234 | {
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| 235 | ASSERT( _id == getAtomIndex(),
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| 236 | "QtObservedAtom::countValuesSubjectKilled() - atom "+toString(getAtomIndex())
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| 237 | +" received countValuesSubjectKilled for atom id "+toString(_id)+".");
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| 238 |
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| 239 | ++subjectKilledCount;
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| 240 |
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| 241 | checkForRemoval();
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| 242 | }
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| 243 |
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| 244 | #ifdef HAVE_INLINE
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| 245 | inline
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| 246 | #endif
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| 247 | void QtObservedAtom::checkForRemoval()
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| 248 | {
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| 249 | if ((signedOffChannels == AllsignedOnChannels) && (subjectKilledCount == MAX_ObservedTypes)) {
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[65c323] | 250 | // remove owner: no more signOff needed
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| 251 | owner = NULL;
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| 252 |
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[fe493f] | 253 | emit atomRemoved();
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[4e6ffe] | 254 |
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| 255 | if (!BoardIsGone) {
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| 256 | board.markObservedAtomAsDisconnected(getAtomIndex());
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| 257 | board.markObservedAtomForErase(getAtomIndex());
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| 258 | }
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[65c323] | 259 | }
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| 260 | }
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[98c35c] | 261 |
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| 262 | void QtObservedAtom::recieveNotification(Observable *publisher, Notification_ptr notification)
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[65c323] | 263 | {
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| 264 | // ObservedValues have been updated before, hence convert updates to Qt's signals
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| 265 | switch (notification->getChannelNo()) {
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| 266 | case AtomObservable::IndexChanged:
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[1c0961] | 267 | {
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| 268 | const atomId_t newId = getAtomIndex();
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| 269 | emit indexChanged(oldId, newId);
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| 270 | oldId = newId;
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[65c323] | 271 | break;
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[1c0961] | 272 | }
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[fe493f] | 273 | case AtomObservable::BondsAdded:
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| 274 | case AtomObservable::BondsRemoved:
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| 275 | emit bondsChanged();
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[65c323] | 276 | break;
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| 277 | case AtomObservable::ElementChanged:
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| 278 | emit elementChanged();
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| 279 | break;
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[fe493f] | 280 | case AtomObservable::MoleculeChanged:
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| 281 | emit moleculeindexChanged();
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| 282 | break;
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| 283 | case AtomObservable::NameChanged:
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| 284 | emit nameChanged();
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| 285 | break;
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| 286 | case AtomObservable::PositionChanged:
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| 287 | emit positionChanged();
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[65c323] | 288 | break;
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[9e9100] | 289 | case AtomObservable::SelectionChanged:
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| 290 | emit selectedChanged();
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| 291 | break;
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[65c323] | 292 | default:
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| 293 | ASSERT(0, "QtObservedAtom::recieveNotification() - we are not signed on to channel "
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| 294 | +toString(notification->getChannelNo())+" of the atom.");
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| 295 | break;
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| 296 | }
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| 297 | }
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| 298 |
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| 299 | void QtObservedAtom::activateObserver()
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| 300 | {
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| 301 | atom * atomref = getAtom(getAtomIndex());
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| 302 | if (atomref != NULL) {
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| 303 | Observable::channels_t channels = getAllObservedChannels();
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| 304 | owner = static_cast<const Observable *>(atomref);
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| 305 | for (Observable::channels_t::const_iterator iter = channels.begin();
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| 306 | iter != channels.end(); ++iter)
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| 307 | owner->signOn(this, *iter);
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[04c3a3] | 308 | if (!BoardIsGone)
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| 309 | board.markObservedAtomAsConnected(getAtomIndex());
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[65c323] | 310 | } else
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[04c3a3] | 311 | signedOffChannels = AllsignedOnChannels;
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[65c323] | 312 | }
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| 313 |
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| 314 | void QtObservedAtom::deactivateObserver()
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| 315 | {
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| 316 | // sign Off
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| 317 | if (owner != NULL) {
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| 318 | Observable::channels_t channels = getAllObservedChannels();
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| 319 | for (Observable::channels_t::const_iterator iter = channels.begin();
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| 320 | iter != channels.end(); ++iter)
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| 321 | owner->signOff(this, *iter);
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| 322 | owner = NULL;
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| 323 | signedOffChannels = AllsignedOnChannels;
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[04c3a3] | 324 | if (!BoardIsGone)
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| 325 | board.markObservedAtomAsDisconnected(getAtomIndex());
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[65c323] | 326 | }
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| 327 | }
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| 328 |
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| 329 | void QtObservedAtom::initObservedValues(
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| 330 | ObservedValues_t &_ObservedValues,
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| 331 | const atomId_t _id,
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| 332 | const atom * const _atomref,
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| 333 | const boost::function<void(const atomId_t)> &_subjectKilled)
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| 334 | {
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| 335 | /* This is an old note from when the code was still part of cstor's initializer body.
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| 336 | * TODO: Probably does not apply anymore but has not yet been tested.
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| 337 | *
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| 338 | * We must not use boost::cref(this) as "this" has not been properly constructed and seemingly
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| 339 | * boost::cref tries to do some magic to grasp the inheritance hierarchy which fails because
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| 340 | * the class has not been fully constructed yet. "This" itself seems to be working fine.
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| 341 | */
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| 342 |
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| 343 | ASSERT( _ObservedValues.size() == MAX_ObservedTypes,
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| 344 | "QtObservedAtom::initObservedValues() - given ObservedValues has not correct size.");
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| 345 |
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| 346 | // fill ObservedValues: index first
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| 347 | const boost::function<atomId_t ()> AtomIndexUpdater(
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| 348 | boost::bind(&QtObservedAtom::updateIndex));
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| 349 |
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| 350 | ObservedValue_wCallback<atomId_t> * const IndexObservable =
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| 351 | new ObservedValue_wCallback<atomId_t>(
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| 352 | _atomref,
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| 353 | boost::bind(&QtObservedAtom::updateIndex),
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| 354 | "AtomIndex_"+toString(_id),
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| 355 | _id,
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| 356 | AtomIndexChannels,
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| 357 | _subjectKilled);
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| 358 | _ObservedValues[AtomIndex] = IndexObservable;
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| 359 |
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| 360 | const boost::function<const atomId_t ()> AtomIndexGetter =
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| 361 | boost::bind(&ObservedValue_wCallback<atomId_t>::get,
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| 362 | IndexObservable);
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| 363 |
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| 364 | // fill ObservedValues: then all the other that need index
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| 365 | const boost::function<ListOfBonds_t ()> AtomBondsUpdater(
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| 366 | boost::bind(&QtObservedAtom::updateBonds, AtomIndexGetter));
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[fe493f] | 367 | const boost::function<atomicNumber_t ()> AtomElementUpdater(
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| 368 | boost::bind(&QtObservedAtom::updateElement, AtomIndexGetter));
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| 369 | const boost::function<moleculeId_t ()> AtomMoleculeIndexUpdater(
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| 370 | boost::bind(&QtObservedAtom::updateMoleculeIndex, AtomIndexGetter));
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| 371 | const boost::function<std::string ()> AtomNameUpdater(
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| 372 | boost::bind(&QtObservedAtom::updateName, AtomIndexGetter));
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| 373 | const boost::function<Vector ()> AtomPositionUpdater(
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| 374 | boost::bind(&QtObservedAtom::updatePosition, AtomIndexGetter));
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[9e9100] | 375 | const boost::function<bool ()> AtomSelectedUpdater(
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| 376 | boost::bind(&QtObservedAtom::updateSelected, AtomIndexGetter));
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[65c323] | 377 |
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[fe493f] | 378 | _ObservedValues[AtomBonds] = new ObservedValue_wCallback<ListOfBonds_t, atomId_t>(
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[65c323] | 379 | _atomref,
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[fe493f] | 380 | AtomBondsUpdater,
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| 381 | "AtomBonds_"+toString(_id),
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| 382 | AtomBondsUpdater(),
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| 383 | AtomBondsChannels,
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[65c323] | 384 | _subjectKilled,
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| 385 | AtomIndexGetter);
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| 386 | _ObservedValues[AtomElement] = new ObservedValue_wCallback<atomicNumber_t, atomId_t>(
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| 387 | _atomref,
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| 388 | AtomElementUpdater,
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| 389 | "AtomElement"+toString(_id),
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| 390 | AtomElementUpdater(),
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| 391 | AtomElementChannels,
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| 392 | _subjectKilled,
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| 393 | AtomIndexGetter);
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[fe493f] | 394 | _ObservedValues[AtomMoleculeIndex] = new ObservedValue_wCallback<moleculeId_t, atomId_t>(
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[65c323] | 395 | _atomref,
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[fe493f] | 396 | AtomMoleculeIndexUpdater,
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| 397 | "AtomMoleculeIndex"+toString(_id),
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| 398 | AtomMoleculeIndexUpdater(),
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| 399 | AtomMoleculeIndexChannels,
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| 400 | _subjectKilled,
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| 401 | AtomIndexGetter);
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| 402 | _ObservedValues[AtomName] = new ObservedValue_wCallback<std::string, atomId_t>(
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| 403 | _atomref,
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| 404 | AtomNameUpdater,
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| 405 | "AtomName"+toString(_id),
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| 406 | AtomNameUpdater(),
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| 407 | AtomNameChannels,
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| 408 | _subjectKilled,
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| 409 | AtomIndexGetter);
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| 410 | _ObservedValues[AtomPosition] = new ObservedValue_wCallback<Vector, atomId_t>(
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| 411 | _atomref,
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| 412 | AtomPositionUpdater,
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| 413 | "AtomPosition_"+toString(_id),
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| 414 | AtomPositionUpdater(),
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| 415 | AtomPositionChannels,
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[65c323] | 416 | _subjectKilled,
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| 417 | AtomIndexGetter);
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[9e9100] | 418 | _ObservedValues[AtomSelected] = new ObservedValue_wCallback<bool, atomId_t>(
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| 419 | _atomref,
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| 420 | AtomSelectedUpdater,
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| 421 | "AtomSelected_"+toString(_id),
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| 422 | AtomSelectedUpdater(),
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| 423 | AtomSelectedChannels,
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| 424 | _subjectKilled,
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| 425 | AtomIndexGetter);
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[65c323] | 426 | }
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| 427 |
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| 428 | void QtObservedAtom::destroyObservedValues(
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| 429 | std::vector<boost::any> &_ObservedValues)
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| 430 | {
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| 431 | delete boost::any_cast<ObservedValue_wCallback<atomId_t> *>(_ObservedValues[AtomIndex]);
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| 432 | delete boost::any_cast<ObservedValue_wCallback<ListOfBonds_t, atomId_t> *>(_ObservedValues[AtomBonds]);
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[fe493f] | 433 | delete boost::any_cast<ObservedValue_wCallback<atomicNumber_t, atomId_t> *>(_ObservedValues[AtomElement]);
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| 434 | delete boost::any_cast<ObservedValue_wCallback<moleculeId_t, atomId_t> *>(_ObservedValues[AtomMoleculeIndex]);
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| 435 | delete boost::any_cast<ObservedValue_wCallback<std::string, atomId_t> *>(_ObservedValues[AtomName]);
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| 436 | delete boost::any_cast<ObservedValue_wCallback<Vector, atomId_t> *>(_ObservedValues[AtomPosition]);
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[9e9100] | 437 | delete boost::any_cast<ObservedValue_wCallback<bool, atomId_t> *>(_ObservedValues[AtomSelected]);
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[65c323] | 438 | _ObservedValues.clear();
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| 439 | }
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| 440 |
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[3b9aa1] | 441 | const atomId_t& QtObservedAtom::getAtomIndex() const
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[65c323] | 442 | {
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| 443 | return boost::any_cast<ObservedValue_wCallback<atomId_t> *>(ObservedValues[AtomIndex])->get();
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| 444 | }
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| 445 |
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[3b9aa1] | 446 | const QtObservedAtom::ListOfBonds_t& QtObservedAtom::getAtomBonds() const
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[65c323] | 447 | {
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[fe493f] | 448 | return boost::any_cast<ObservedValue_wCallback<ListOfBonds_t, atomId_t> *>(ObservedValues[AtomBonds])->get();
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[65c323] | 449 | }
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| 450 |
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[3b9aa1] | 451 | const atomicNumber_t& QtObservedAtom::getAtomElement() const
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[65c323] | 452 | {
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| 453 | return boost::any_cast<ObservedValue_wCallback<atomicNumber_t, atomId_t> *>(ObservedValues[AtomElement])->get();
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| 454 | }
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| 455 |
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[3b9aa1] | 456 | const moleculeId_t& QtObservedAtom::getAtomMoleculeIndex() const
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[65c323] | 457 | {
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[fe493f] | 458 | return boost::any_cast<ObservedValue_wCallback<moleculeId_t, atomId_t> *>(ObservedValues[AtomMoleculeIndex])->get();
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| 459 | }
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| 460 |
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[3b9aa1] | 461 | const std::string& QtObservedAtom::getAtomName() const
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[fe493f] | 462 | {
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| 463 | return boost::any_cast<ObservedValue_wCallback<std::string, atomId_t> *>(ObservedValues[AtomName])->get();
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| 464 | }
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| 465 |
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[3b9aa1] | 466 | const Vector& QtObservedAtom::getAtomPosition() const
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[fe493f] | 467 | {
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| 468 | return boost::any_cast<ObservedValue_wCallback<Vector, atomId_t> *>(ObservedValues[AtomPosition])->get();
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[65c323] | 469 | }
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[9e9100] | 470 |
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| 471 | const bool QtObservedAtom::getAtomSelected() const
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| 472 | {
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| 473 | return boost::any_cast<ObservedValue_wCallback<bool, atomId_t> *>(ObservedValues[AtomSelected])->get();
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| 474 | }
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