/*
* Project: MoleCuilder
* Description: creates and alters molecular systems
* Copyright (C) 2010-2012 University of Bonn. All rights reserved.
*
*
* This file is part of MoleCuilder.
*
* MoleCuilder is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation, either version 2 of the License, or
* (at your option) any later version.
*
* MoleCuilder is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with MoleCuilder. If not, see .
*/
/*
* ThermoStatContainer.cpp
*
* Created on: 12.06.2010
* Author: heber
*/
// include config.h
#ifdef HAVE_CONFIG_H
#include
#endif
#include "CodePatterns/MemDebug.hpp"
#include
#include "CodePatterns/Log.hpp"
#include "Thermostats/ThermoStatContainer.hpp"
#include "Parser/ConfigFileBuffer.hpp"
#include
#include
#include
#include
#include
#include
/** Constructor for class ThermoStatContainer.
*
*/
ThermoStatContainer::ThermoStatContainer() :
activeThermostat(0),
TargetTemp(0.00095004455)
{
ThermostatTraits *BerendsenTrait = new ThermostatTraits();
availThermostats[BerendsenTrait->getName()] = BerendsenTrait;
ThermostatTraits *GaussianTrait = new ThermostatTraits();
availThermostats[GaussianTrait->getName()] = GaussianTrait;
ThermostatTraits *LangevinTrait = new ThermostatTraits();
availThermostats[LangevinTrait->getName()] = LangevinTrait;
ThermostatTraits *NoseHooverTrait = new ThermostatTraits();
availThermostats[NoseHooverTrait->getName()] = NoseHooverTrait;
ThermostatTraits *NoThermostatTrait = new ThermostatTraits();
availThermostats[NoThermostatTrait->getName()] = NoThermostatTrait;
ThermostatTraits *WoodcockTrait = new ThermostatTraits();
availThermostats[WoodcockTrait->getName()] = WoodcockTrait;
// for debugging: list all thermostats
// cout << "List of known thermostats: ";
// for(traitsMap::iterator iter = availThermostats.begin();iter!=availThermostats.end();++iter){
// cout << iter->first << " ";
// }
// cout << endl;
ASSERT(availThermostats.size()==6,"Not all implemented thermostats referenced!\nDid you check the names in the traits?");
activeThermostat=new Berendsen();
activeThermostat->addToContainer(this);
}
ThermostatTraits *ThermoStatContainer::getTraitByName(const std::string name){
if(!availThermostats.count(name))
return 0;
return availThermostats[name];
}
Thermostat *ThermoStatContainer::makeByName(const std::string name,class ConfigFileBuffer * const fb){
ThermostatTraits* trait = getTraitByName(name);
if(trait){
Thermostat *res = trait->make(fb);
res->addToContainer(this);
return res;
}
else{
return 0;
}
}
void ThermoStatContainer::makeActive(const std::string name,class ConfigFileBuffer * const fb){
Thermostat* newThermostat = makeByName(name,fb);
if(newThermostat){
if(activeThermostat){
delete activeThermostat;
}
activeThermostat = newThermostat;
}
}
void ThermoStatContainer::chooseNone(){
if(activeThermostat){
delete activeThermostat;
}
activeThermostat = new NoThermostat();
}
/** Destructor for Class ThermoStatContainer.
*
*/
ThermoStatContainer::~ThermoStatContainer()
{
if(activeThermostat){
delete activeThermostat;
}
for(traitsMap::iterator iter= availThermostats.begin();iter!=availThermostats.end();++iter){
delete (iter->second);
}
}