| 1 | /* | 
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| 2 | * Project: MoleCuilder | 
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| 3 | * Description: creates and alters molecular systems | 
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| 4 | * Copyright (C)  2010-2012 University of Bonn. All rights reserved. | 
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| 5 | * | 
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| 6 | * | 
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| 7 | *   This file is part of MoleCuilder. | 
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| 8 | * | 
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| 9 | *    MoleCuilder is free software: you can redistribute it and/or modify | 
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| 10 | *    it under the terms of the GNU General Public License as published by | 
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| 11 | *    the Free Software Foundation, either version 2 of the License, or | 
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| 12 | *    (at your option) any later version. | 
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| 13 | * | 
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| 14 | *    MoleCuilder is distributed in the hope that it will be useful, | 
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| 15 | *    but WITHOUT ANY WARRANTY; without even the implied warranty of | 
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| 16 | *    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | 
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| 17 | *    GNU General Public License for more details. | 
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| 18 | * | 
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| 19 | *    You should have received a copy of the GNU General Public License | 
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| 20 | *    along with MoleCuilder.  If not, see <http://www.gnu.org/licenses/>. | 
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| 21 | */ | 
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| 22 |  | 
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| 23 | /* | 
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| 24 | * ThermoStatContainer.cpp | 
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| 25 | * | 
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| 26 | *  Created on: 12.06.2010 | 
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| 27 | *      Author: heber | 
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| 28 | */ | 
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| 29 |  | 
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| 30 | // include config.h | 
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| 31 | #ifdef HAVE_CONFIG_H | 
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| 32 | #include <config.h> | 
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| 33 | #endif | 
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| 34 |  | 
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| 35 | //#include "CodePatterns/MemDebug.hpp" | 
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| 36 |  | 
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| 37 | #include <cstring> | 
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| 38 |  | 
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| 39 | #include "CodePatterns/Log.hpp" | 
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| 40 | #include "Thermostats/ThermoStatContainer.hpp" | 
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| 41 | #include "Parser/ConfigFileBuffer.hpp" | 
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| 42 |  | 
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| 43 | #include <Thermostats/Berendsen.hpp> | 
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| 44 | #include <Thermostats/GaussianThermostat.hpp> | 
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| 45 | #include <Thermostats/Langevin.hpp> | 
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| 46 | #include <Thermostats/NoseHoover.hpp> | 
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| 47 | #include <Thermostats/NoThermostat.hpp> | 
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| 48 | #include <Thermostats/Woodcock.hpp> | 
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| 49 |  | 
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| 50 | /** Constructor for class ThermoStatContainer. | 
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| 51 | * | 
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| 52 | */ | 
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| 53 | ThermoStatContainer::ThermoStatContainer() : | 
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| 54 | activeThermostat(0), | 
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| 55 | TargetTemp(0.00095004455) | 
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| 56 | { | 
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| 57 | ThermostatTraits<Thermostat> *BerendsenTrait = new ThermostatTraits<Berendsen>(); | 
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| 58 | availThermostats[BerendsenTrait->getName()] = BerendsenTrait; | 
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| 59 | ThermostatTraits<Thermostat> *GaussianTrait = new ThermostatTraits<GaussianThermostat>(); | 
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| 60 | availThermostats[GaussianTrait->getName()] = GaussianTrait; | 
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| 61 | ThermostatTraits<Thermostat> *LangevinTrait = new ThermostatTraits<Langevin>(); | 
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| 62 | availThermostats[LangevinTrait->getName()] = LangevinTrait; | 
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| 63 | ThermostatTraits<Thermostat> *NoseHooverTrait = new ThermostatTraits<NoseHoover>(); | 
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| 64 | availThermostats[NoseHooverTrait->getName()] = NoseHooverTrait; | 
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| 65 | ThermostatTraits<Thermostat> *NoThermostatTrait = new ThermostatTraits<NoThermostat>(); | 
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| 66 | availThermostats[NoThermostatTrait->getName()] = NoThermostatTrait; | 
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| 67 | ThermostatTraits<Thermostat> *WoodcockTrait = new ThermostatTraits<Woodcock>(); | 
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| 68 | availThermostats[WoodcockTrait->getName()] = WoodcockTrait; | 
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| 69 |  | 
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| 70 | // for debugging: list all thermostats | 
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| 71 | //  cout << "List of known thermostats: "; | 
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| 72 | //  for(traitsMap::iterator iter = availThermostats.begin();iter!=availThermostats.end();++iter){ | 
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| 73 | //    cout << iter->first << " "; | 
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| 74 | //  } | 
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| 75 | //  cout << endl; | 
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| 76 |  | 
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| 77 | ASSERT(availThermostats.size()==6,"Not all implemented thermostats referenced!\nDid you check the names in the traits?"); | 
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| 78 | activeThermostat=new NoThermostat(); | 
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| 79 | activeThermostat->addToContainer(this); | 
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| 80 | } | 
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| 81 |  | 
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| 82 | ThermostatTraits<Thermostat> *ThermoStatContainer::getTraitByName(const std::string name){ | 
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| 83 | if(!availThermostats.count(name)) | 
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| 84 | return 0; | 
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| 85 | return availThermostats[name]; | 
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| 86 | } | 
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| 87 |  | 
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| 88 | Thermostat *ThermoStatContainer::makeByName(const std::string name,class ConfigFileBuffer * const fb){ | 
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| 89 | ThermostatTraits<Thermostat>* trait = getTraitByName(name); | 
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| 90 | if(trait){ | 
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| 91 | Thermostat *res = trait->make(fb); | 
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| 92 | res->addToContainer(this); | 
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| 93 | return res; | 
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| 94 | } | 
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| 95 | else{ | 
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| 96 | return 0; | 
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| 97 | } | 
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| 98 | } | 
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| 99 |  | 
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| 100 | void ThermoStatContainer::makeActive(const std::string name,class ConfigFileBuffer * const fb){ | 
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| 101 | Thermostat* newThermostat = makeByName(name,fb); | 
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| 102 | if(newThermostat){ | 
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| 103 | if(activeThermostat){ | 
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| 104 | delete activeThermostat; | 
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| 105 | } | 
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| 106 | activeThermostat = newThermostat; | 
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| 107 | } | 
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| 108 | } | 
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| 109 |  | 
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| 110 | void ThermoStatContainer::chooseNone(){ | 
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| 111 | if(activeThermostat){ | 
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| 112 | delete activeThermostat; | 
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| 113 | } | 
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| 114 | activeThermostat = new NoThermostat(); | 
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| 115 | } | 
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| 116 |  | 
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| 117 | /** Destructor for Class ThermoStatContainer. | 
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| 118 | * | 
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| 119 | */ | 
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| 120 | ThermoStatContainer::~ThermoStatContainer() | 
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| 121 | { | 
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| 122 | if(activeThermostat){ | 
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| 123 | delete activeThermostat; | 
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| 124 | } | 
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| 125 | for(traitsMap::iterator iter= availThermostats.begin();iter!=availThermostats.end();++iter){ | 
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| 126 | delete (iter->second); | 
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| 127 | } | 
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| 128 | } | 
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| 129 |  | 
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| 130 |  | 
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