1 | /*
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2 | * Project: MoleCuilder
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3 | * Description: creates and alters molecular systems
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4 | * Copyright (C) 2010 University of Bonn. All rights reserved.
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5 | * Please see the LICENSE file or "Copyright notice" in builder.cpp for details.
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6 | */
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7 |
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8 | /*
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9 | * ThermoStatContainer.cpp
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10 | *
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11 | * Created on: 12.06.2010
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12 | * Author: heber
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13 | */
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14 |
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15 | // include config.h
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16 | #ifdef HAVE_CONFIG_H
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17 | #include <config.h>
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18 | #endif
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19 |
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20 | #include "CodePatterns/MemDebug.hpp"
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21 |
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22 | #include <cstring>
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23 |
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24 | #include "ConfigFileBuffer.hpp"
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25 | #include "config.hpp"
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26 | #include "CodePatterns/Log.hpp"
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27 | #include "ThermoStatContainer.hpp"
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28 | #include "CodePatterns/Verbose.hpp"
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29 |
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30 | #include <Thermostats/Berendsen.hpp>
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31 | #include <Thermostats/GaussianThermostat.hpp>
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32 | #include <Thermostats/Langevin.hpp>
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33 | #include <Thermostats/NoseHoover.hpp>
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34 | #include <Thermostats/NoThermostat.hpp>
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35 | #include <Thermostats/Woodcock.hpp>
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36 |
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37 | /** Constructor for class ThermoStatContainer.
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38 | *
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39 | */
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40 | ThermoStatContainer::ThermoStatContainer() :
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41 | activeThermostat(0),
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42 | TargetTemp(0.00095004455)
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43 | {
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44 | ThermostatTraits<Thermostat> *BerendsenTrait = new ThermostatTraits<Berendsen>();
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45 | availThermostats[BerendsenTrait->getName()] = BerendsenTrait;
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46 | ThermostatTraits<Thermostat> *GaussianTrait = new ThermostatTraits<GaussianThermostat>();
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47 | availThermostats[GaussianTrait->getName()] = GaussianTrait;
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48 | ThermostatTraits<Thermostat> *LangevinTrait = new ThermostatTraits<Langevin>();
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49 | availThermostats[LangevinTrait->getName()] = LangevinTrait;
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50 | ThermostatTraits<Thermostat> *NoseHooverTrait = new ThermostatTraits<NoseHoover>();
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51 | availThermostats[NoseHooverTrait->getName()] = NoseHooverTrait;
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52 | ThermostatTraits<Thermostat> *NoThermostatTrait = new ThermostatTraits<NoThermostat>();
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53 | availThermostats[NoThermostatTrait->getName()] = NoThermostatTrait;
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54 | ThermostatTraits<Thermostat> *WoodcockTrait = new ThermostatTraits<Woodcock>();
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55 | availThermostats[WoodcockTrait->getName()] = WoodcockTrait;
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56 |
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57 | // for debugging: list all thermostats
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58 | // cout << "List of known thermostats: ";
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59 | // for(traitsMap::iterator iter = availThermostats.begin();iter!=availThermostats.end();++iter){
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60 | // cout << iter->first << " ";
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61 | // }
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62 | // cout << endl;
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63 |
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64 | ASSERT(availThermostats.size()==6,"Not all implemented thermostats referenced!\nDid you check the names in the traits?");
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65 | activeThermostat=new Berendsen();
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66 | }
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67 |
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68 | ThermostatTraits<Thermostat> *ThermoStatContainer::getTraitByName(const std::string name){
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69 | if(!availThermostats.count(name))
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70 | return 0;
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71 | return availThermostats[name];
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72 | }
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73 |
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74 | Thermostat *ThermoStatContainer::makeByName(const std::string name,class ConfigFileBuffer * const fb){
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75 | ThermostatTraits<Thermostat>* trait = getTraitByName(name);
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76 | if(trait){
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77 | Thermostat *res = trait->make(fb);
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78 | res->addToContainer(this);
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79 | return res;
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80 | }
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81 | else{
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82 | return 0;
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83 | }
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84 | }
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85 |
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86 | void ThermoStatContainer::makeActive(const std::string name,class ConfigFileBuffer * const fb){
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87 | Thermostat* newThermostat = makeByName(name,fb);
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88 | if(newThermostat){
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89 | if(activeThermostat){
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90 | delete activeThermostat;
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91 | }
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92 | activeThermostat = newThermostat;
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93 | }
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94 | }
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95 |
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96 | void ThermoStatContainer::chooseNone(){
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97 | if(activeThermostat){
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98 | delete activeThermostat;
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99 | }
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100 | activeThermostat = new NoThermostat();
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101 | }
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102 |
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103 | /** Destructor for Class ThermoStatContainer.
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104 | *
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105 | */
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106 | ThermoStatContainer::~ThermoStatContainer()
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107 | {
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108 | if(activeThermostat){
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109 | delete activeThermostat;
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110 | }
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111 | for(traitsMap::iterator iter= availThermostats.begin();iter!=availThermostats.end();++iter){
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112 | delete (iter->second);
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113 | }
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114 | }
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115 |
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116 |
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