| 1 | /*
 | 
|---|
| 2 |  * tesselation.hpp
 | 
|---|
| 3 |  *
 | 
|---|
| 4 |  *  The tesselation class is meant to contain the envelope (concave, convex or neither) of a set of Vectors.
 | 
|---|
| 5 |  *  As we actually mean this stuff for atoms, we have to encapsulate it all a bit.
 | 
|---|
| 6 |  *
 | 
|---|
| 7 |  *  Created on: Aug 3, 2009
 | 
|---|
| 8 |  *      Author: heber
 | 
|---|
| 9 |  */
 | 
|---|
| 10 | 
 | 
|---|
| 11 | #ifndef TESSELATION_HPP_
 | 
|---|
| 12 | #define TESSELATION_HPP_
 | 
|---|
| 13 | 
 | 
|---|
| 14 | using namespace std;
 | 
|---|
| 15 | 
 | 
|---|
| 16 | /*********************************************** includes ***********************************/
 | 
|---|
| 17 | 
 | 
|---|
| 18 | // include config.h
 | 
|---|
| 19 | #ifdef HAVE_CONFIG_H
 | 
|---|
| 20 | #include <config.h>
 | 
|---|
| 21 | #endif
 | 
|---|
| 22 | 
 | 
|---|
| 23 | #include <map>
 | 
|---|
| 24 | #include <list>
 | 
|---|
| 25 | #include <set>
 | 
|---|
| 26 | #include <stack>
 | 
|---|
| 27 | 
 | 
|---|
| 28 | #include "Atom/atom_particleinfo.hpp"
 | 
|---|
| 29 | #include "BoundaryMaps.hpp"
 | 
|---|
| 30 | #include "BoundaryPointSet.hpp"
 | 
|---|
| 31 | #include "LinearAlgebra/Vector.hpp"
 | 
|---|
| 32 | #include "Atom/TesselPoint.hpp"
 | 
|---|
| 33 | 
 | 
|---|
| 34 | 
 | 
|---|
| 35 | /****************************************** forward declarations *****************************/
 | 
|---|
| 36 | 
 | 
|---|
| 37 | class BoundaryPointSet;
 | 
|---|
| 38 | class BoundaryLineSet;
 | 
|---|
| 39 | class BoundaryTriangleSet;
 | 
|---|
| 40 | class CandidateForTesselation;
 | 
|---|
| 41 | class IPointCloud;
 | 
|---|
| 42 | class LinkedCell_deprecated;
 | 
|---|
| 43 | class Plane;
 | 
|---|
| 44 | class Tesselation;
 | 
|---|
| 45 | 
 | 
|---|
| 46 | /********************************************** definitions *********************************/
 | 
|---|
| 47 | 
 | 
|---|
| 48 | enum { DoTecplotOutput=1 };
 | 
|---|
| 49 | enum { DoRaster3DOutput=1 };
 | 
|---|
| 50 | enum { DoVRMLOutput=0 };
 | 
|---|
| 51 | 
 | 
|---|
| 52 | extern "C" const char *TecplotSuffix;
 | 
|---|
| 53 | extern "C" const char *Raster3DSuffix;
 | 
|---|
| 54 | extern "C" const char *VRMLSUffix;
 | 
|---|
| 55 | 
 | 
|---|
| 56 | extern "C" const double ParallelEpsilon;
 | 
|---|
| 57 | 
 | 
|---|
| 58 | // ======================================================= some template functions =========================================
 | 
|---|
| 59 | 
 | 
|---|
| 60 | /********************************************** declarations *******************************/
 | 
|---|
| 61 | 
 | 
|---|
| 62 | // =========================================================== class TESSELATION ===========================================
 | 
|---|
| 63 | 
 | 
|---|
| 64 | /** Is iterable container of TesselPoints.
 | 
|---|
| 65 |  */
 | 
|---|
| 66 | class Tesselation {
 | 
|---|
| 67 |   public:
 | 
|---|
| 68 | 
 | 
|---|
| 69 |     Tesselation();
 | 
|---|
| 70 |     virtual ~Tesselation();
 | 
|---|
| 71 | 
 | 
|---|
| 72 |     void operator()(IPointCloud & cloud, const double SPHERERADIUS);
 | 
|---|
| 73 |     double getVolumeOfConvexEnvelope(const bool IsAngstroem) const;
 | 
|---|
| 74 |     double getAreaOfEnvelope(const bool IsAngstroem) const;
 | 
|---|
| 75 | 
 | 
|---|
| 76 |     void AddTesselationPoint(TesselPoint* Candidate, const int n);
 | 
|---|
| 77 |     void SetTesselationPoint(TesselPoint* Candidate, const int n) const;
 | 
|---|
| 78 |     void AddTesselationLine(const Vector * OptCenter, const BoundaryPointSet * const candidate, class BoundaryPointSet *a, class BoundaryPointSet *b, const int n);
 | 
|---|
| 79 |     void AddNewTesselationTriangleLine(class BoundaryPointSet *a, class BoundaryPointSet *b, const int n);
 | 
|---|
| 80 |     void AddExistingTesselationTriangleLine(class BoundaryLineSet *FindLine, int n);
 | 
|---|
| 81 |     void AddTesselationTriangle();
 | 
|---|
| 82 |     void AddTesselationTriangle(const int nr);
 | 
|---|
| 83 |     void AddCandidateTriangle(CandidateForTesselation &CandidateLine, enum centers type);
 | 
|---|
| 84 |     void AddDegeneratedTriangle(CandidateForTesselation &CandidateLine, const double RADIUS, const LinkedCell_deprecated *LC);
 | 
|---|
| 85 |     void AddCandidatePolygon(CandidateForTesselation CandidateLine, const double RADIUS, const LinkedCell_deprecated *LC);
 | 
|---|
| 86 |     void RemoveTesselationTriangle(class BoundaryTriangleSet *triangle);
 | 
|---|
| 87 |     void RemoveTesselationLine(class BoundaryLineSet *line);
 | 
|---|
| 88 |     void RemoveTesselationPoint(class BoundaryPointSet *point);
 | 
|---|
| 89 |     bool CheckDegeneracy(CandidateForTesselation &CandidateLine, const double RADIUS, const LinkedCell_deprecated *LC) const;
 | 
|---|
| 90 | 
 | 
|---|
| 91 | 
 | 
|---|
| 92 |     // concave envelope
 | 
|---|
| 93 |     bool FindStartingTriangle(const double RADIUS, const LinkedCell_deprecated *LC);
 | 
|---|
| 94 |     void FindSecondPointForTesselation(class TesselPoint* a, Vector Oben, class TesselPoint*& OptCandidate, double Storage[3], double RADIUS, const LinkedCell_deprecated *LC);
 | 
|---|
| 95 |     void FindThirdPointForTesselation(const Vector &NormalVector, const Vector &SearchDirection, const Vector &OldSphereCenter, CandidateForTesselation &CandidateLine, const class BoundaryPointSet  * const ThirdNode, const double RADIUS, const LinkedCell_deprecated *LC) const;
 | 
|---|
| 96 |     bool FindNextSuitableTriangle(CandidateForTesselation &CandidateLine, const BoundaryTriangleSet &T, const double& RADIUS, const LinkedCell_deprecated *LC);
 | 
|---|
| 97 |     bool FindCandidatesforOpenLines(const double RADIUS, const LinkedCell_deprecated *&LCList);
 | 
|---|
| 98 |     int CheckPresenceOfTriangle(class TesselPoint *Candidates[3]) const;
 | 
|---|
| 99 |     class BoundaryTriangleSet * GetPresentTriangle(TesselPoint *Candidates[3]);
 | 
|---|
| 100 | 
 | 
|---|
| 101 |     // convex envelope
 | 
|---|
| 102 |     void TesselateOnBoundary(IPointCloud & cloud);
 | 
|---|
| 103 |     void GuessStartingTriangle();
 | 
|---|
| 104 |     bool InsertStraddlingPoints(IPointCloud & cloud, const LinkedCell_deprecated *LC);
 | 
|---|
| 105 |     double RemovePointFromTesselatedSurface(class BoundaryPointSet *point);
 | 
|---|
| 106 |     class BoundaryLineSet * FlipBaseline(class BoundaryLineSet *Base);
 | 
|---|
| 107 |     double PickFarthestofTwoBaselines(class BoundaryLineSet *Base);
 | 
|---|
| 108 |     class BoundaryPointSet *IsConvexRectangle(class BoundaryLineSet *Base);
 | 
|---|
| 109 |     IndexToIndex * FindAllDegeneratedTriangles();
 | 
|---|
| 110 |     IndexToIndex * FindAllDegeneratedLines();
 | 
|---|
| 111 |     void RemoveDegeneratedTriangles();
 | 
|---|
| 112 |     void AddBoundaryPointByDegeneratedTriangle(class TesselPoint *point, LinkedCell_deprecated *LC);
 | 
|---|
| 113 |     int CorrectAllDegeneratedPolygons();
 | 
|---|
| 114 | 
 | 
|---|
| 115 |     TesselPointSet * GetAllConnectedPoints(const TesselPoint* const Point) const;
 | 
|---|
| 116 |     TriangleSet * GetAllTriangles(const BoundaryPointSet * const Point) const;
 | 
|---|
| 117 |     ListOfTesselPointList * GetPathsOfConnectedPoints(const TesselPoint* const Point) const;
 | 
|---|
| 118 |     ListOfTesselPointList * GetClosedPathsOfConnectedPoints(const TesselPoint* const Point) const;
 | 
|---|
| 119 |     TesselPointList * GetCircleOfSetOfPoints(TesselPointSet *SetOfNeighbours, const TesselPoint* const Point, const Vector &Reference) const;
 | 
|---|
| 120 |     TesselPointList * GetCircleOfConnectedTriangles(TesselPointSet *SetOfNeighbours, const TesselPoint* const Point, const Vector &Reference) const;
 | 
|---|
| 121 |     class BoundaryPointSet * GetCommonEndpoint(const BoundaryLineSet * line1, const BoundaryLineSet * line2) const;
 | 
|---|
| 122 |     TriangleList * FindTriangles(const TesselPoint* const Points[3]) const;
 | 
|---|
| 123 |     TriangleList * FindClosestTrianglesToVector(const Vector &x, const LinkedCell_deprecated* LC) const;
 | 
|---|
| 124 |     BoundaryTriangleSet * FindClosestTriangleToVector(const Vector &x, const LinkedCell_deprecated* LC) const;
 | 
|---|
| 125 |     bool IsInnerPoint(const Vector &Point, const LinkedCell_deprecated* const LC) const;
 | 
|---|
| 126 |     double GetDistanceSquaredToTriangle(const Vector &Point, const BoundaryTriangleSet* const triangle) const;
 | 
|---|
| 127 |     double GetDistanceToSurface(const Vector &Point, const LinkedCell_deprecated* const LC) const;
 | 
|---|
| 128 |     BoundaryTriangleSet * GetClosestTriangleOnSurface(const Vector &Point, const LinkedCell_deprecated* const LC) const;
 | 
|---|
| 129 |     bool AddBoundaryPoint(TesselPoint * Walker, const int n);
 | 
|---|
| 130 |     DistanceToPointMap * FindClosestBoundaryPointsToVector(const Vector &x, const LinkedCell_deprecated* LC) const;
 | 
|---|
| 131 |     BoundaryLineSet * FindClosestBoundaryLineToVector(const Vector &x, const LinkedCell_deprecated* LC) const;
 | 
|---|
| 132 | 
 | 
|---|
| 133 |     // print for debugging
 | 
|---|
| 134 |     void PrintAllBoundaryPoints(ofstream *out) const;
 | 
|---|
| 135 |     void PrintAllBoundaryLines(ofstream *out) const;
 | 
|---|
| 136 |     void PrintAllBoundaryTriangles(ofstream *out) const;
 | 
|---|
| 137 | 
 | 
|---|
| 138 |     // store envelope in file
 | 
|---|
| 139 |     void Output(const char *filename, IPointCloud & cloud);
 | 
|---|
| 140 | 
 | 
|---|
| 141 |     PointMap PointsOnBoundary;
 | 
|---|
| 142 |     LineMap LinesOnBoundary;
 | 
|---|
| 143 |     CandidateMap OpenLines;
 | 
|---|
| 144 |     TriangleMap TrianglesOnBoundary;
 | 
|---|
| 145 |     int PointsOnBoundaryCount;
 | 
|---|
| 146 |     int LinesOnBoundaryCount;
 | 
|---|
| 147 |     int TrianglesOnBoundaryCount;
 | 
|---|
| 148 | 
 | 
|---|
| 149 |     typedef PointMap::iterator iterator;
 | 
|---|
| 150 |     typedef PointMap::const_iterator const_iterator;
 | 
|---|
| 151 |     iterator begin() { return PointsOnBoundary.begin(); }
 | 
|---|
| 152 |     const_iterator begin() const { return PointsOnBoundary.begin(); }
 | 
|---|
| 153 |     iterator end() { return PointsOnBoundary.end(); }
 | 
|---|
| 154 |     const_iterator end() const { return PointsOnBoundary.end(); }
 | 
|---|
| 155 | 
 | 
|---|
| 156 |     class BoundaryPointSet *BPS[2];
 | 
|---|
| 157 |     class BoundaryLineSet *BLS[3];
 | 
|---|
| 158 |     class BoundaryTriangleSet *BTS;
 | 
|---|
| 159 |     class BoundaryTriangleSet *LastTriangle;
 | 
|---|
| 160 |     int TriangleFilesWritten;
 | 
|---|
| 161 | 
 | 
|---|
| 162 |   private:
 | 
|---|
| 163 |     static const double HULLEPSILON; //!< TODO: Get rid of HULLEPSILON, points to numerical instabilities
 | 
|---|
| 164 | 
 | 
|---|
| 165 |     mutable class BoundaryPointSet *TPS[3]; //this is a Storage for pointers to triangle points, this and BPS[2] needed due to AddLine restrictions
 | 
|---|
| 166 | 
 | 
|---|
| 167 |     mutable PointMap::const_iterator InternalPointer;
 | 
|---|
| 168 | 
 | 
|---|
| 169 |     //bool HasOtherBaselineBetterCandidate(const BoundaryLineSet * const BaseRay, const TesselPoint * const OptCandidate, double ShortestAngle, double RADIUS, const LinkedCell_deprecated * const LC) const;
 | 
|---|
| 170 |     void FindDegeneratedCandidatesforOpenLines(TesselPoint * const Sprinter, const Vector * const OptCenter);
 | 
|---|
| 171 | };
 | 
|---|
| 172 | 
 | 
|---|
| 173 | #endif /* TESSELATION_HPP_ */
 | 
|---|