1 | /*
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2 | * Project: MoleCuilder
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3 | * Description: creates and alters molecular systems
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4 | * Copyright (C) 2013 Frederik Heber. All rights reserved.
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5 | *
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6 | *
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7 | * This file is part of MoleCuilder.
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8 | *
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9 | * MoleCuilder is free software: you can redistribute it and/or modify
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10 | * it under the terms of the GNU General Public License as published by
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11 | * the Free Software Foundation, either version 2 of the License, or
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12 | * (at your option) any later version.
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13 | *
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14 | * MoleCuilder is distributed in the hope that it will be useful,
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15 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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16 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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17 | * GNU General Public License for more details.
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18 | *
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19 | * You should have received a copy of the GNU General Public License
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20 | * along with MoleCuilder. If not, see <http://www.gnu.org/licenses/>.
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21 | */
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22 |
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23 | /*
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24 | * FourBodyPotential_TorsionUnitTest.cpp
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25 | *
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26 | * Created on: Jul 08, 2013
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27 | * Author: heber
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28 | */
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29 |
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30 | // include config.h
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31 | #ifdef HAVE_CONFIG_H
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32 | #include <config.h>
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33 | #endif
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34 |
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35 | using namespace std;
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36 |
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37 | #include <cppunit/CompilerOutputter.h>
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38 | #include <cppunit/extensions/TestFactoryRegistry.h>
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39 | #include <cppunit/ui/text/TestRunner.h>
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40 |
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41 | #include "FourBodyPotential_TorsionUnitTest.hpp"
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42 |
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43 | #include <boost/assign.hpp>
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44 |
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45 | #include "CodePatterns/Assert.hpp"
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46 |
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47 | #include "FunctionApproximation/FunctionArgument.hpp"
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48 | #include "Potentials/Specifics/FourBodyPotential_Torsion.hpp"
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49 | #include "Potentials/helpers.hpp"
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50 |
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51 | using namespace boost::assign;
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52 |
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53 | #ifdef HAVE_TESTRUNNER
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54 | #include "UnitTestMain.hpp"
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55 | #endif /*HAVE_TESTRUNNER*/
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56 |
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57 | /********************************************** Test classes **************************************/
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58 |
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59 | // Registers the fixture into the 'registry'
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60 | CPPUNIT_TEST_SUITE_REGISTRATION( FourBodyPotential_TorsionTest );
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61 |
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62 | const double spring_constant = .5;
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63 |
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64 | void FourBodyPotential_TorsionTest::setUp()
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65 | {
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66 | // failing asserts should be thrown
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67 | ASSERT_DO(Assert::Throw);
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68 |
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69 | // create three distances to have the desired angle
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70 | typedef std::vector<double> angles_t;
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71 | angles_t angles;
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72 | angles += -0.5, -.4, -.3, -.2, -.1, 0., .1, .2, .3, .4, .5;
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73 | FunctionModel::arguments_t tempvector(6);
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74 | tempvector[0] = argument_t( std::make_pair(0,1), std::make_pair(0,1), 1.);
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75 | tempvector[1] = argument_t( std::make_pair(0,2), std::make_pair(0,1), 1.);
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76 | tempvector[2] = argument_t( std::make_pair(0,3), std::make_pair(0,0), 0.);
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77 | tempvector[3] = argument_t( std::make_pair(1,2), std::make_pair(1,1), 1.);
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78 | tempvector[4] = argument_t( std::make_pair(1,3), std::make_pair(0,1), 1.);
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79 | tempvector[5] = argument_t( std::make_pair(2,3), std::make_pair(0,1), 1.);
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80 | // we have two equilateral triangles (length 1)
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81 | // height is then \sqrt(2*(1+1)-1)*.5=sqrt(3)*.5
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82 | // then angle in triangle of both heights and connecting line is
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83 | // (h_1^2+h_2^2 - x^2) / (2*h_1*h_2) = cos(theta). Solving this equation
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84 | // for the unknown distance x is what we need
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85 | // 3/4+3/4-x/(2*sqrt(3)*.5*sqrt(3)*.5)
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86 | // x = sqrt(h_1^2+h_2^2 - cos(theta) * (2*h_1*h_2))
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87 | for (angles_t::const_iterator iter = angles.begin(); iter != angles.end(); ++iter) {
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88 | tempvector[2].distance = sqrt(.75+.75 - (*iter)*(1.5));
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89 | input += tempvector;
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90 | }
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91 | output +=
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92 | spring_constant*0.25,
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93 | spring_constant*0.16,
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94 | spring_constant*0.09,
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95 | spring_constant*0.04,
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96 | spring_constant*0.01,
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97 | spring_constant*0.,
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98 | spring_constant*0.01,
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99 | spring_constant*0.04,
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100 | spring_constant*0.09,
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101 | spring_constant*0.16,
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102 | spring_constant*0.25;
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103 |
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104 | CPPUNIT_ASSERT_EQUAL( input.size(), output.size() );
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105 | }
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106 |
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107 |
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108 | void FourBodyPotential_TorsionTest::tearDown()
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109 | {
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110 | }
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111 |
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112 | /** UnitTest for operator()
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113 | */
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114 | void FourBodyPotential_TorsionTest::operatorTest()
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115 | {
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116 | FourBodyPotential_Torsion::ParticleTypes_t types =
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117 | boost::assign::list_of<FourBodyPotential_Torsion::ParticleType_t>
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118 | (0)(1)(1)(0)
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119 | ;
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120 | FourBodyPotential_Torsion angle(types, spring_constant,0.);
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121 | for (size_t index = 0; index < input.size(); ++index) {
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122 | const FourBodyPotential_Torsion::results_t result =
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123 | angle( FunctionModel::list_of_arguments_t(1, input[index]) );
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124 | CPPUNIT_ASSERT(
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125 | Helpers::isEqual(
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126 | output[index],
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127 | result[0]
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128 | )
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129 | );
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130 | }
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131 | }
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132 |
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133 | /** UnitTest for derivative()
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134 | */
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135 | void FourBodyPotential_TorsionTest::derivativeTest()
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136 | {
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137 | FourBodyPotential_Torsion::ParticleTypes_t types =
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138 | boost::assign::list_of<FourBodyPotential_Torsion::ParticleType_t>
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139 | (0)(1)(1)(0)
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140 | ;
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141 | FourBodyPotential_Torsion angle(types, spring_constant,0.);
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142 | CPPUNIT_ASSERT(
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143 | Helpers::isEqual(
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144 | 0.,
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145 | angle.derivative(
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146 | FunctionModel::list_of_arguments_t(1, input[5])
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147 | )[0],
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148 | 10.
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149 | )
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150 | );
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151 | }
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152 |
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153 |
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154 | /** UnitTest for parameter_derivative()
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155 | */
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156 | void FourBodyPotential_TorsionTest::parameter_derivativeTest()
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157 | {
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158 | FourBodyPotential_Torsion::ParticleTypes_t types =
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159 | boost::assign::list_of<FourBodyPotential_Torsion::ParticleType_t>
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160 | (0)(1)(1)(0)
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161 | ;
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162 | FourBodyPotential_Torsion angle(types, spring_constant,0.);
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163 | CPPUNIT_ASSERT(
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164 | Helpers::isEqual(
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165 | 0.,
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166 | angle.parameter_derivative(
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167 | FunctionModel::list_of_arguments_t(1, input[5]),
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168 | 0
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169 | )[0],
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170 | 10.
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171 | )
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172 | );
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173 | CPPUNIT_ASSERT(
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174 | Helpers::isEqual(
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175 | 0.,
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176 | angle.parameter_derivative(
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177 | FunctionModel::list_of_arguments_t(1, input[5]),
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178 | 1
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179 | )[0],
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180 | 10.
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181 | )
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182 | );
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183 | }
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