| 1 | /* | 
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| 2 | * Project: MoleCuilder | 
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| 3 | * Description: creates and alters molecular systems | 
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| 4 | * Copyright (C)  2013 Frederik Heber. All rights reserved. | 
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| 5 | * | 
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| 6 | * | 
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| 7 | *   This file is part of MoleCuilder. | 
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| 8 | * | 
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| 9 | *    MoleCuilder is free software: you can redistribute it and/or modify | 
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| 10 | *    it under the terms of the GNU General Public License as published by | 
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| 11 | *    the Free Software Foundation, either version 2 of the License, or | 
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| 12 | *    (at your option) any later version. | 
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| 13 | * | 
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| 14 | *    MoleCuilder is distributed in the hope that it will be useful, | 
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| 15 | *    but WITHOUT ANY WARRANTY; without even the implied warranty of | 
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| 16 | *    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | 
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| 17 | *    GNU General Public License for more details. | 
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| 18 | * | 
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| 19 | *    You should have received a copy of the GNU General Public License | 
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| 20 | *    along with MoleCuilder.  If not, see <http://www.gnu.org/licenses/>. | 
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| 21 | */ | 
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| 22 |  | 
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| 23 | /* | 
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| 24 | * FourBodyPotential_TorsionUnitTest.cpp | 
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| 25 | * | 
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| 26 | *  Created on: Jul 08, 2013 | 
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| 27 | *      Author: heber | 
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| 28 | */ | 
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| 29 |  | 
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| 30 | // include config.h | 
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| 31 | #ifdef HAVE_CONFIG_H | 
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| 32 | #include <config.h> | 
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| 33 | #endif | 
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| 34 |  | 
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| 35 | using namespace std; | 
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| 36 |  | 
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| 37 | #include <cppunit/CompilerOutputter.h> | 
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| 38 | #include <cppunit/extensions/TestFactoryRegistry.h> | 
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| 39 | #include <cppunit/ui/text/TestRunner.h> | 
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| 40 |  | 
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| 41 | #include "FourBodyPotential_TorsionUnitTest.hpp" | 
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| 42 |  | 
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| 43 | #include <boost/assign.hpp> | 
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| 44 |  | 
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| 45 | #include "CodePatterns/Assert.hpp" | 
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| 46 |  | 
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| 47 | #include "FunctionApproximation/FunctionArgument.hpp" | 
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| 48 | #include "Potentials/Specifics/FourBodyPotential_Torsion.hpp" | 
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| 49 | #include "Potentials/helpers.hpp" | 
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| 50 |  | 
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| 51 | using namespace boost::assign; | 
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| 52 |  | 
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| 53 | #ifdef HAVE_TESTRUNNER | 
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| 54 | #include "UnitTestMain.hpp" | 
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| 55 | #endif /*HAVE_TESTRUNNER*/ | 
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| 56 |  | 
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| 57 | /********************************************** Test classes **************************************/ | 
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| 58 |  | 
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| 59 | // Registers the fixture into the 'registry' | 
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| 60 | CPPUNIT_TEST_SUITE_REGISTRATION( FourBodyPotential_TorsionTest ); | 
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| 61 |  | 
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| 62 | const double spring_constant = .5; | 
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| 63 |  | 
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| 64 | void FourBodyPotential_TorsionTest::setUp() | 
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| 65 | { | 
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| 66 | // failing asserts should be thrown | 
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| 67 | ASSERT_DO(Assert::Throw); | 
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| 68 |  | 
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| 69 | // create three distances to have the desired angle | 
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| 70 | typedef std::vector<double> angles_t; | 
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| 71 | angles_t angles; | 
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| 72 | angles += -0.5, -.4, -.3, -.2, -.1, 0., .1, .2, .3, .4, .5; | 
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| 73 | FunctionModel::arguments_t tempvector(6); | 
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| 74 | tempvector[0] = argument_t( std::make_pair(0,1), std::make_pair(0,1), 1.); | 
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| 75 | tempvector[1] = argument_t( std::make_pair(0,2), std::make_pair(0,1), 1.); | 
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| 76 | tempvector[2] = argument_t( std::make_pair(0,3), std::make_pair(0,0), 0.); | 
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| 77 | tempvector[3] = argument_t( std::make_pair(1,2), std::make_pair(1,1), 1.); | 
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| 78 | tempvector[4] = argument_t( std::make_pair(1,3), std::make_pair(0,1), 1.); | 
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| 79 | tempvector[5] = argument_t( std::make_pair(2,3), std::make_pair(0,1), 1.); | 
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| 80 | // we have two equilateral triangles (length 1) | 
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| 81 | // height is then \sqrt(2*(1+1)-1)*.5=sqrt(3)*.5 | 
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| 82 | // then angle in triangle of both heights and connecting line is | 
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| 83 | // (h_1^2+h_2^2 - x^2) / (2*h_1*h_2) = cos(theta). Solving this equation | 
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| 84 | // for the unknown distance x is what we need | 
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| 85 | // 3/4+3/4-x/(2*sqrt(3)*.5*sqrt(3)*.5) | 
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| 86 | // x = sqrt(h_1^2+h_2^2 - cos(theta) * (2*h_1*h_2)) | 
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| 87 | for (angles_t::const_iterator iter = angles.begin(); iter != angles.end(); ++iter) { | 
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| 88 | tempvector[2].distance = sqrt(.75+.75 - (*iter)*(1.5)); | 
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| 89 | input += tempvector; | 
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| 90 | } | 
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| 91 | output += | 
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| 92 | spring_constant*0.25, | 
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| 93 | spring_constant*0.16, | 
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| 94 | spring_constant*0.09, | 
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| 95 | spring_constant*0.04, | 
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| 96 | spring_constant*0.01, | 
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| 97 | spring_constant*0., | 
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| 98 | spring_constant*0.01, | 
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| 99 | spring_constant*0.04, | 
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| 100 | spring_constant*0.09, | 
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| 101 | spring_constant*0.16, | 
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| 102 | spring_constant*0.25; | 
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| 103 |  | 
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| 104 | CPPUNIT_ASSERT_EQUAL( input.size(), output.size() ); | 
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| 105 | } | 
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| 106 |  | 
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| 107 |  | 
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| 108 | void FourBodyPotential_TorsionTest::tearDown() | 
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| 109 | { | 
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| 110 | } | 
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| 111 |  | 
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| 112 | /** UnitTest for operator() | 
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| 113 | */ | 
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| 114 | void FourBodyPotential_TorsionTest::operatorTest() | 
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| 115 | { | 
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| 116 | FourBodyPotential_Torsion::ParticleTypes_t types = | 
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| 117 | boost::assign::list_of<FourBodyPotential_Torsion::ParticleType_t> | 
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| 118 | (0)(1)(1)(0) | 
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| 119 | ; | 
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| 120 | FourBodyPotential_Torsion angle(types, spring_constant,0.); | 
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| 121 | for (size_t index = 0; index < input.size(); ++index) { | 
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| 122 | const FourBodyPotential_Torsion::results_t result = | 
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| 123 | angle( FunctionModel::list_of_arguments_t(1, input[index]) ); | 
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| 124 | CPPUNIT_ASSERT( | 
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| 125 | Helpers::isEqual( | 
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| 126 | output[index], | 
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| 127 | result[0] | 
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| 128 | ) | 
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| 129 | ); | 
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| 130 | } | 
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| 131 | } | 
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| 132 |  | 
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| 133 | /** UnitTest for derivative() | 
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| 134 | */ | 
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| 135 | void FourBodyPotential_TorsionTest::derivativeTest() | 
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| 136 | { | 
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| 137 | FourBodyPotential_Torsion::ParticleTypes_t types = | 
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| 138 | boost::assign::list_of<FourBodyPotential_Torsion::ParticleType_t> | 
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| 139 | (0)(1)(1)(0) | 
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| 140 | ; | 
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| 141 | FourBodyPotential_Torsion angle(types, spring_constant,0.); | 
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| 142 | CPPUNIT_ASSERT( | 
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| 143 | Helpers::isEqual( | 
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| 144 | 0., | 
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| 145 | angle.derivative( | 
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| 146 | FunctionModel::list_of_arguments_t(1, input[5]) | 
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| 147 | )[0], | 
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| 148 | 10. | 
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| 149 | ) | 
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| 150 | ); | 
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| 151 | } | 
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| 152 |  | 
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| 153 |  | 
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| 154 | /** UnitTest for parameter_derivative() | 
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| 155 | */ | 
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| 156 | void FourBodyPotential_TorsionTest::parameter_derivativeTest() | 
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| 157 | { | 
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| 158 | FourBodyPotential_Torsion::ParticleTypes_t types = | 
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| 159 | boost::assign::list_of<FourBodyPotential_Torsion::ParticleType_t> | 
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| 160 | (0)(1)(1)(0) | 
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| 161 | ; | 
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| 162 | FourBodyPotential_Torsion angle(types, spring_constant,0.); | 
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| 163 | CPPUNIT_ASSERT( | 
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| 164 | Helpers::isEqual( | 
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| 165 | 0., | 
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| 166 | angle.parameter_derivative( | 
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| 167 | FunctionModel::list_of_arguments_t(1, input[5]), | 
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| 168 | 0 | 
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| 169 | )[0], | 
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| 170 | 10. | 
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| 171 | ) | 
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| 172 | ); | 
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| 173 | CPPUNIT_ASSERT( | 
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| 174 | Helpers::isEqual( | 
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| 175 | 0., | 
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| 176 | angle.parameter_derivative( | 
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| 177 | FunctionModel::list_of_arguments_t(1, input[5]), | 
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| 178 | 1 | 
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| 179 | )[0], | 
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| 180 | 10. | 
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| 181 | ) | 
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| 182 | ); | 
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| 183 | } | 
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