| [e2037e] | 1 | /* | 
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|  | 2 | * Project: MoleCuilder | 
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|  | 3 | * Description: creates and alters molecular systems | 
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|  | 4 | * Copyright (C)  2013 Frederik Heber. All rights reserved. | 
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|  | 5 | * | 
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|  | 6 | * | 
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|  | 7 | *   This file is part of MoleCuilder. | 
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|  | 8 | * | 
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|  | 9 | *    MoleCuilder is free software: you can redistribute it and/or modify | 
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|  | 10 | *    it under the terms of the GNU General Public License as published by | 
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|  | 11 | *    the Free Software Foundation, either version 2 of the License, or | 
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|  | 12 | *    (at your option) any later version. | 
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|  | 13 | * | 
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|  | 14 | *    MoleCuilder is distributed in the hope that it will be useful, | 
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|  | 15 | *    but WITHOUT ANY WARRANTY; without even the implied warranty of | 
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|  | 16 | *    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | 
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|  | 17 | *    GNU General Public License for more details. | 
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|  | 18 | * | 
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|  | 19 | *    You should have received a copy of the GNU General Public License | 
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|  | 20 | *    along with MoleCuilder.  If not, see <http://www.gnu.org/licenses/>. | 
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|  | 21 | */ | 
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|  | 22 |  | 
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|  | 23 | /* | 
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|  | 24 | * FourBodyPotential_TorsionUnitTest.cpp | 
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|  | 25 | * | 
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|  | 26 | *  Created on: Jul 08, 2013 | 
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|  | 27 | *      Author: heber | 
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|  | 28 | */ | 
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|  | 29 |  | 
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|  | 30 | // include config.h | 
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|  | 31 | #ifdef HAVE_CONFIG_H | 
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|  | 32 | #include <config.h> | 
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|  | 33 | #endif | 
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|  | 34 |  | 
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|  | 35 | using namespace std; | 
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|  | 36 |  | 
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|  | 37 | #include <cppunit/CompilerOutputter.h> | 
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|  | 38 | #include <cppunit/extensions/TestFactoryRegistry.h> | 
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|  | 39 | #include <cppunit/ui/text/TestRunner.h> | 
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|  | 40 |  | 
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|  | 41 | #include "FourBodyPotential_TorsionUnitTest.hpp" | 
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|  | 42 |  | 
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|  | 43 | #include <boost/assign.hpp> | 
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|  | 44 |  | 
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|  | 45 | #include "CodePatterns/Assert.hpp" | 
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|  | 46 |  | 
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|  | 47 | #include "FunctionApproximation/FunctionArgument.hpp" | 
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|  | 48 | #include "Potentials/Specifics/FourBodyPotential_Torsion.hpp" | 
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|  | 49 | #include "Potentials/helpers.hpp" | 
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|  | 50 |  | 
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|  | 51 | using namespace boost::assign; | 
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|  | 52 |  | 
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|  | 53 | #ifdef HAVE_TESTRUNNER | 
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|  | 54 | #include "UnitTestMain.hpp" | 
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|  | 55 | #endif /*HAVE_TESTRUNNER*/ | 
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|  | 56 |  | 
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|  | 57 | /********************************************** Test classes **************************************/ | 
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|  | 58 |  | 
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|  | 59 | // Registers the fixture into the 'registry' | 
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|  | 60 | CPPUNIT_TEST_SUITE_REGISTRATION( FourBodyPotential_TorsionTest ); | 
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|  | 61 |  | 
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|  | 62 | const double spring_constant = .5; | 
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|  | 63 |  | 
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|  | 64 | void FourBodyPotential_TorsionTest::setUp() | 
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|  | 65 | { | 
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|  | 66 | // failing asserts should be thrown | 
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|  | 67 | ASSERT_DO(Assert::Throw); | 
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|  | 68 |  | 
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|  | 69 | // create three distances to have the desired angle | 
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|  | 70 | typedef std::vector<double> angles_t; | 
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|  | 71 | angles_t angles; | 
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|  | 72 | angles += -0.5, -.4, -.3, -.2, -.1, 0., .1, .2, .3, .4, .5; | 
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|  | 73 | FunctionModel::arguments_t tempvector(6); | 
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|  | 74 | tempvector[0] = argument_t( std::make_pair(0,1), std::make_pair(0,1), 1.); | 
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|  | 75 | tempvector[1] = argument_t( std::make_pair(0,2), std::make_pair(0,1), 1.); | 
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|  | 76 | tempvector[2] = argument_t( std::make_pair(0,3), std::make_pair(0,0), 0.); | 
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|  | 77 | tempvector[3] = argument_t( std::make_pair(1,2), std::make_pair(1,1), 1.); | 
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|  | 78 | tempvector[4] = argument_t( std::make_pair(1,3), std::make_pair(0,1), 1.); | 
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|  | 79 | tempvector[5] = argument_t( std::make_pair(2,3), std::make_pair(0,1), 1.); | 
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|  | 80 | // we have two equilateral triangles (length 1) | 
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|  | 81 | // height is then \sqrt(2*(1+1)-1)*.5=sqrt(3)*.5 | 
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|  | 82 | // then angle in triangle of both heights and connecting line is | 
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|  | 83 | // (h_1^2+h_2^2 - x^2) / (2*h_1*h_2) = cos(theta). Solving this equation | 
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|  | 84 | // for the unknown distance x is what we need | 
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|  | 85 | // 3/4+3/4-x/(2*sqrt(3)*.5*sqrt(3)*.5) | 
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|  | 86 | // x = sqrt(h_1^2+h_2^2 - cos(theta) * (2*h_1*h_2)) | 
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|  | 87 | for (angles_t::const_iterator iter = angles.begin(); iter != angles.end(); ++iter) { | 
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|  | 88 | tempvector[2].distance = sqrt(.75+.75 - (*iter)*(1.5)); | 
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|  | 89 | input += tempvector; | 
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|  | 90 | } | 
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|  | 91 | output += | 
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|  | 92 | spring_constant*0.25, | 
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|  | 93 | spring_constant*0.16, | 
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|  | 94 | spring_constant*0.09, | 
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|  | 95 | spring_constant*0.04, | 
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|  | 96 | spring_constant*0.01, | 
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|  | 97 | spring_constant*0., | 
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|  | 98 | spring_constant*0.01, | 
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|  | 99 | spring_constant*0.04, | 
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|  | 100 | spring_constant*0.09, | 
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|  | 101 | spring_constant*0.16, | 
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|  | 102 | spring_constant*0.25; | 
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|  | 103 |  | 
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|  | 104 | CPPUNIT_ASSERT_EQUAL( input.size(), output.size() ); | 
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|  | 105 | } | 
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|  | 106 |  | 
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|  | 107 |  | 
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|  | 108 | void FourBodyPotential_TorsionTest::tearDown() | 
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|  | 109 | { | 
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|  | 110 | } | 
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|  | 111 |  | 
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|  | 112 | /** UnitTest for operator() | 
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|  | 113 | */ | 
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|  | 114 | void FourBodyPotential_TorsionTest::operatorTest() | 
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|  | 115 | { | 
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|  | 116 | FourBodyPotential_Torsion::ParticleTypes_t types = | 
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|  | 117 | boost::assign::list_of<FourBodyPotential_Torsion::ParticleType_t> | 
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|  | 118 | (0)(1)(1)(0) | 
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|  | 119 | ; | 
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|  | 120 | FourBodyPotential_Torsion angle(types, spring_constant,0.); | 
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|  | 121 | for (size_t index = 0; index < input.size(); ++index) { | 
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|  | 122 | const FourBodyPotential_Torsion::results_t result = | 
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|  | 123 | angle( input[index] ); | 
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|  | 124 | CPPUNIT_ASSERT( | 
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|  | 125 | Helpers::isEqual( | 
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|  | 126 | output[index], | 
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|  | 127 | result[0] | 
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|  | 128 | ) | 
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|  | 129 | ); | 
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|  | 130 | } | 
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|  | 131 | } | 
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|  | 132 |  | 
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|  | 133 | /** UnitTest for derivative() | 
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|  | 134 | */ | 
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|  | 135 | void FourBodyPotential_TorsionTest::derivativeTest() | 
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|  | 136 | { | 
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|  | 137 | FourBodyPotential_Torsion::ParticleTypes_t types = | 
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|  | 138 | boost::assign::list_of<FourBodyPotential_Torsion::ParticleType_t> | 
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|  | 139 | (0)(1)(1)(0) | 
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|  | 140 | ; | 
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|  | 141 | FourBodyPotential_Torsion angle(types, spring_constant,0.); | 
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|  | 142 | CPPUNIT_ASSERT( | 
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|  | 143 | Helpers::isEqual( | 
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|  | 144 | 0., | 
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|  | 145 | angle.derivative( | 
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|  | 146 | input[5] | 
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|  | 147 | )[0], | 
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|  | 148 | 10. | 
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|  | 149 | ) | 
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|  | 150 | ); | 
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|  | 151 | } | 
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|  | 152 |  | 
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|  | 153 |  | 
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|  | 154 | /** UnitTest for parameter_derivative() | 
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|  | 155 | */ | 
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|  | 156 | void FourBodyPotential_TorsionTest::parameter_derivativeTest() | 
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|  | 157 | { | 
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|  | 158 | FourBodyPotential_Torsion::ParticleTypes_t types = | 
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|  | 159 | boost::assign::list_of<FourBodyPotential_Torsion::ParticleType_t> | 
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|  | 160 | (0)(1)(1)(0) | 
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|  | 161 | ; | 
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|  | 162 | FourBodyPotential_Torsion angle(types, spring_constant,0.); | 
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|  | 163 | CPPUNIT_ASSERT( | 
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|  | 164 | Helpers::isEqual( | 
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|  | 165 | 0., | 
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|  | 166 | angle.parameter_derivative( | 
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|  | 167 | input[5], | 
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|  | 168 | 0 | 
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|  | 169 | )[0], | 
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|  | 170 | 10. | 
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|  | 171 | ) | 
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|  | 172 | ); | 
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|  | 173 | CPPUNIT_ASSERT( | 
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|  | 174 | Helpers::isEqual( | 
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|  | 175 | 0., | 
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|  | 176 | angle.parameter_derivative( | 
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|  | 177 | input[5], | 
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|  | 178 | 1 | 
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|  | 179 | )[0], | 
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|  | 180 | 10. | 
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|  | 181 | ) | 
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|  | 182 | ); | 
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|  | 183 | } | 
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