source: src/Potentials/Specifics/PairPotential_Harmonic.hpp@ ed2551

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Last change on this file since ed2551 was ed2551, checked in by Frederik Heber <heber@…>, 12 years ago

All Pair_.. and ManyBodyPotentials are now also derived from SerializablePotential.

  • added static ParameterNames, skipping "energy_offset" which should not go to file.
  • overrode operator<<() and ..>>() for SaturationPotential to print both potentials independently.
  • adapted LevMartest and all unit tests.
  • Property mode set to 100644
File size: 4.6 KB
Line 
1/*
2 * PairPotential_Harmonic.hpp
3 *
4 * Created on: Sep 26, 2012
5 * Author: heber
6 */
7
8#ifndef PAIRPOTENTIAL_HARMONIC_HPP_
9#define PAIRPOTENTIAL_HARMONIC_HPP_
10
11
12// include config.h
13#ifdef HAVE_CONFIG_H
14#include <config.h>
15#endif
16
17#include <limits>
18
19#include "CodePatterns/Assert.hpp"
20
21#include "Potentials/EmpiricalPotential.hpp"
22#include "Potentials/SerializablePotential.hpp"
23#include "FunctionApproximation/FunctionModel.hpp"
24
25/** This is the implementation of a harmonic pair potential.
26 *
27 * This evaluates \f$ k \cdot (r -r_0)^2 \f$.
28 *
29 */
30class PairPotential_Harmonic :
31 virtual public EmpiricalPotential,
32 virtual public FunctionModel,
33 virtual public SerializablePotential
34{
35 //!> grant unit test access to internal parts
36 friend class PairPotential_HarmonicTest;
37 // some repeated typedefs to avoid ambiguities
38 typedef FunctionModel::arguments_t arguments_t;
39 typedef FunctionModel::result_t result_t;
40 typedef FunctionModel::results_t results_t;
41 typedef EmpiricalPotential::derivative_components_t derivative_components_t;
42 typedef FunctionModel::parameters_t parameters_t;
43public:
44 PairPotential_Harmonic(const ParticleTypes_t &_ParticleTypes);
45 PairPotential_Harmonic(
46 const ParticleTypes_t &_ParticleTypes,
47 const double _spring_constant,
48 const double _equilibrium_distance,
49 const double _energy_offset);
50 virtual ~PairPotential_Harmonic() {}
51
52 /** Setter for parameters as required by FunctionModel interface.
53 *
54 * \param _params given set of parameters
55 */
56 void setParameters(const parameters_t &_params);
57
58 /** Getter for parameters as required by FunctionModel interface.
59 *
60 * \return set of parameters
61 */
62 parameters_t getParameters() const
63 {
64 return params;
65 }
66
67 /** Getter for the number of parameters of this model function.
68 *
69 * \return number of parameters
70 */
71 size_t getParameterDimension() const
72 {
73 return 3;
74 }
75
76 /** Evaluates the harmonic potential function for the given arguments.
77 *
78 * @param arguments single distance
79 * @return value of the potential function
80 */
81 results_t operator()(const arguments_t &arguments) const;
82
83 /** Evaluates the derivative of the potential function.
84 *
85 * @param arguments single distance
86 * @return vector with derivative with respect to the input degrees of freedom
87 */
88 derivative_components_t derivative(const arguments_t &arguments) const;
89
90 /** Evaluates the derivative of the function with the given \a arguments
91 * with respect to a specific parameter indicated by \a index.
92 *
93 * \param arguments set of arguments as input variables to the function
94 * \param index derivative of which parameter
95 * \return result vector containing the derivative with respect to the given
96 * input
97 */
98 results_t parameter_derivative(const arguments_t &arguments, const size_t index) const;
99
100 /** States whether lower and upper boundaries should be used to constraint
101 * the parameter search for this function model.
102 *
103 * \return true - constraints should be used, false - else
104 */
105 bool isBoxConstraint() const {
106 return true;
107 }
108
109 /** Returns a vector which are the lower boundaries for each parameter_t
110 * of this FunctionModel.
111 *
112 * \return vector of parameter_t resembling lowest allowed values
113 */
114 parameters_t getLowerBoxConstraints() const {
115 parameters_t lowerbounds(getParameterDimension(), -std::numeric_limits<double>::max());
116 lowerbounds[equilibrium_distance] = 0.;
117 return lowerbounds;
118 }
119
120 /** Returns a vector which are the upper boundaries for each parameter_t
121 * of this FunctionModel.
122 *
123 * \return vector of parameter_t resembling highest allowed values
124 */
125 parameters_t getUpperBoxConstraints() const {
126 return parameters_t(getParameterDimension(), std::numeric_limits<double>::max());
127 }
128
129 /** Return the token name of this specific potential.
130 *
131 * \return token name of the potential
132 */
133 const std::string& getToken() const
134 { return potential_token; }
135
136 /** Returns a vector of parameter names.
137 *
138 * This is required from the specific implementation
139 *
140 * \return vector of strings containing parameter names
141 */
142 const ParameterNames_t& getParameterNames() const
143 { return ParameterNames; }
144
145 enum parameter_enum_t {
146 spring_constant=0,
147 equilibrium_distance=1,
148 energy_offset=2,
149 MAXPARAMS
150 };
151private:
152 //!> parameter vector with parameters as in enum parameter_enum_t
153 parameters_t params;
154
155 //!> static definitions of the parameter name for this potential
156 static const ParameterNames_t ParameterNames;
157
158 //!> static token of this potential type
159 static const std::string potential_token;
160};
161
162#endif /* PAIRPOTENTIAL_HARMONIC_HPP_ */
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