1 | /*
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2 | * PairPotential_Harmonic.hpp
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3 | *
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4 | * Created on: Sep 26, 2012
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5 | * Author: heber
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6 | */
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7 |
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8 | #ifndef PAIRPOTENTIAL_HARMONIC_HPP_
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9 | #define PAIRPOTENTIAL_HARMONIC_HPP_
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10 |
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11 |
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12 | // include config.h
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13 | #ifdef HAVE_CONFIG_H
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14 | #include <config.h>
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15 | #endif
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16 |
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17 | #include "CodePatterns/Assert.hpp"
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18 |
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19 | #include "Potentials/EmpiricalPotential.hpp"
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20 | #include "FunctionApproximation/FunctionModel.hpp"
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21 |
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22 | /** This is the implementation of a harmonic pair potential.
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23 | *
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24 | * This evaluates \f$ k \cdot (r -r_0)^2 \f$.
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25 | *
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26 | */
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27 | class PairPotential_Harmonic : virtual public EmpiricalPotential, virtual public FunctionModel
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28 | {
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29 | //!> grant unit test access to internal parts
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30 | friend class PairPotential_HarmonicTest;
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31 | // some repeated typedefs to avoid ambiguities
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32 | typedef FunctionModel::arguments_t arguments_t;
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33 | typedef FunctionModel::result_t result_t;
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34 | typedef FunctionModel::results_t results_t;
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35 | typedef EmpiricalPotential::derivative_components_t derivative_components_t;
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36 | typedef FunctionModel::parameters_t parameters_t;
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37 | public:
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38 | PairPotential_Harmonic();
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39 | PairPotential_Harmonic(
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40 | const double _spring_constant,
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41 | const double _equilibrium_distance,
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42 | const double _energy_offset);
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43 | virtual ~PairPotential_Harmonic() {}
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44 |
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45 | /** Setter for parameters as required by FunctionModel interface.
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46 | *
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47 | * \param _params given set of parameters
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48 | */
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49 | void setParameters(const parameters_t &_params)
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50 | {
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51 | ASSERT( _params.size() <= getParameterDimension(),
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52 | "PairPotential_Harmonic::setParameters() - we need not more than "
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53 | +toString(getParameterDimension())+" parameters.");
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54 | for(size_t i=0;i<_params.size();++i)
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55 | params[i] = _params[i];
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56 | }
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57 |
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58 | /** Getter for parameters as required by FunctionModel interface.
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59 | *
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60 | * \return set of parameters
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61 | */
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62 | parameters_t getParameters() const
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63 | {
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64 | return params;
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65 | }
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66 |
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67 | /** Getter for the number of parameters of this model function.
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68 | *
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69 | * \return number of parameters
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70 | */
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71 | size_t getParameterDimension() const
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72 | {
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73 | return 3;
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74 | }
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75 |
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76 | /** Evaluates the harmonic potential function for the given arguments.
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77 | *
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78 | * @param arguments single distance
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79 | * @return value of the potential function
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80 | */
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81 | results_t operator()(const arguments_t &arguments) const;
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82 |
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83 | /** Evaluates the derivative of the potential function.
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84 | *
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85 | * @param arguments single distance
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86 | * @return vector with derivative with respect to the input degrees of freedom
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87 | */
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88 | derivative_components_t derivative(const arguments_t &arguments) const;
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89 |
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90 | /** Evaluates the derivative of the function with the given \a arguments
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91 | * with respect to a specific parameter indicated by \a index.
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92 | *
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93 | * \param arguments set of arguments as input variables to the function
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94 | * \param index derivative of which parameter
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95 | * \return result vector containing the derivative with respect to the given
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96 | * input
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97 | */
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98 | results_t parameter_derivative(const arguments_t &arguments, const size_t index) const;
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99 |
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100 | private:
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101 | enum parameter_enum_t {
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102 | spring_constant=0,
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103 | equilibrium_distance=1,
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104 | energy_offset=2,
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105 | MAXPARAMS
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106 | };
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107 | //!> parameter vector with parameters as in enum parameter_enum_t
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108 | parameters_t params;
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109 | };
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110 |
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111 | #endif /* PAIRPOTENTIAL_HARMONIC_HPP_ */
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