Action_Thermostats
Add_AtomRandomPerturbation
Add_FitFragmentPartialChargesAction
Add_RotateAroundBondAction
Add_SelectAtomByNameAction
Added_ParseSaveFragmentResults
Adding_Graph_to_ChangeBondActions
Adding_MD_integration_tests
Adding_ParticleName_to_Atom
Adding_StructOpt_integration_tests
AtomFragments
Automaking_mpqc_open
AutomationFragmentation_failures
Candidate_v1.5.4
Candidate_v1.6.0
Candidate_v1.6.1
ChangeBugEmailaddress
ChangingTestPorts
ChemicalSpaceEvaluator
CombiningParticlePotentialParsing
Combining_Subpackages
Debian_Package_split
Debian_package_split_molecuildergui_only
Disabling_MemDebug
Docu_Python_wait
EmpiricalPotential_contain_HomologyGraph
EmpiricalPotential_contain_HomologyGraph_documentation
Enable_parallel_make_install
Enhance_userguide
Enhanced_StructuralOptimization
Enhanced_StructuralOptimization_continued
Example_ManyWaysToTranslateAtom
Exclude_Hydrogens_annealWithBondGraph
FitPartialCharges_GlobalError
Fix_ChargeSampling_PBC
Fix_ChronosMutex
Fix_FitPartialCharges
Fix_FitPotential_needs_atomicnumbers
Fix_ForceAnnealing
Fix_IndependentFragmentGrids
Fix_ParseParticles
Fix_ParseParticles_split_forward_backward_Actions
Fix_PopActions
Fix_QtFragmentList_sorted_selection
Fix_Restrictedkeyset_FragmentMolecule
Fix_StatusMsg
Fix_StepWorldTime_single_argument
Fix_Verbose_Codepatterns
Fix_fitting_potentials
Fixes
ForceAnnealing_goodresults
ForceAnnealing_oldresults
ForceAnnealing_tocheck
ForceAnnealing_with_BondGraph
ForceAnnealing_with_BondGraph_continued
ForceAnnealing_with_BondGraph_continued_betteresults
ForceAnnealing_with_BondGraph_contraction-expansion
FragmentAction_writes_AtomFragments
FragmentMolecule_checks_bonddegrees
GeometryObjects
Gui_Fixes
Gui_displays_atomic_force_velocity
ImplicitCharges
IndependentFragmentGrids
IndependentFragmentGrids_IndividualZeroInstances
IndependentFragmentGrids_IntegrationTest
IndependentFragmentGrids_Sole_NN_Calculation
JobMarket_RobustOnKillsSegFaults
JobMarket_StableWorkerPool
JobMarket_unresolvable_hostname_fix
MoreRobust_FragmentAutomation
ODR_violation_mpqc_open
PartialCharges_OrthogonalSummation
PdbParser_setsAtomName
PythonUI_with_named_parameters
QtGui_reactivate_TimeChanged_changes
Recreated_GuiChecks
Rewrite_FitPartialCharges
RotateToPrincipalAxisSystem_UndoRedo
SaturateAtoms_findBestMatching
SaturateAtoms_singleDegree
StoppableMakroAction
Subpackage_CodePatterns
Subpackage_JobMarket
Subpackage_LinearAlgebra
Subpackage_levmar
Subpackage_mpqc_open
Subpackage_vmg
Switchable_LogView
ThirdParty_MPQC_rebuilt_buildsystem
TrajectoryDependenant_MaxOrder
TremoloParser_IncreasedPrecision
TremoloParser_MultipleTimesteps
TremoloParser_setsAtomName
Ubuntu_1604_changes
stable
Last change
on this file since a9099d was b40690, checked in by Frederik Heber <heber@…>, 9 years ago |
Fit..PotentialAction now allow setting maximum number of optimization iteration.
- also reduced default value to 100 instead of 1000 for speeding up tests.
|
-
Property mode
set to
100644
|
File size:
1.1 KB
|
Line | |
---|
1 | /*
|
---|
2 | * PotentialTrainer.hpp
|
---|
3 | *
|
---|
4 | * Created on: Sep 11, 2014
|
---|
5 | * Author: heber
|
---|
6 | */
|
---|
7 |
|
---|
8 | #ifndef POTENTIALTRAINER_HPP_
|
---|
9 | #define POTENTIALTRAINER_HPP_
|
---|
10 |
|
---|
11 | // include config.h
|
---|
12 | #ifdef HAVE_CONFIG_H
|
---|
13 | #include <config.h>
|
---|
14 | #endif
|
---|
15 |
|
---|
16 | #include <boost/filesystem/path.hpp>
|
---|
17 | #include <vector>
|
---|
18 |
|
---|
19 | #include "Potentials/SerializablePotential.hpp"
|
---|
20 |
|
---|
21 | class element;
|
---|
22 | class HomologyContainer;
|
---|
23 | class HomologyGraph;
|
---|
24 |
|
---|
25 | /** This class is a functor for training a (compound) potential from homologies.
|
---|
26 | *
|
---|
27 | */
|
---|
28 | class PotentialTrainer
|
---|
29 | {
|
---|
30 | public:
|
---|
31 | PotentialTrainer();
|
---|
32 | ~PotentialTrainer();
|
---|
33 |
|
---|
34 | bool operator()(
|
---|
35 | const HomologyContainer &_homologies,
|
---|
36 | const HomologyGraph &_graph,
|
---|
37 | const boost::filesystem::path &_trainingfile,
|
---|
38 | const unsigned int _maxiterations,
|
---|
39 | const double _threshold,
|
---|
40 | const unsigned int _best_of_howmany) const;
|
---|
41 |
|
---|
42 | static
|
---|
43 | HomologyGraph getFirstGraphwithSpecifiedElements(
|
---|
44 | const HomologyContainer &homologies,
|
---|
45 | const SerializablePotential::ParticleTypes_t &types);
|
---|
46 |
|
---|
47 | static
|
---|
48 | SerializablePotential::ParticleTypes_t getNumbersFromElements(
|
---|
49 | const std::vector<const element *> &fragment);
|
---|
50 | };
|
---|
51 |
|
---|
52 |
|
---|
53 | #endif /* POTENTIALTRAINER_HPP_ */
|
---|
Note:
See
TracBrowser
for help on using the repository browser.