source: src/Potentials/BindingModel.cpp@ aa91de0

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Last change on this file since aa91de0 was bc069f, checked in by Frederik Heber <heber@…>, 8 years ago

Added BindingModel which extends HomologyGraph for an ordered set of FragmentNodes.

  • Property mode set to 100644
File size: 1.7 KB
Line 
1/*
2 * Project: MoleCuilder
3 * Description: creates and alters molecular systems
4 * Copyright (C) 2016 Frederik Heber. All rights reserved.
5 *
6 *
7 * This file is part of MoleCuilder.
8 *
9 * MoleCuilder is free software: you can redistribute it and/or modify
10 * it under the terms of the GNU General Public License as published by
11 * the Free Software Foundation, either version 2 of the License, or
12 * (at your option) any later version.
13 *
14 * MoleCuilder is distributed in the hope that it will be useful,
15 * but WITHOUT ANY WARRANTY; without even the implied warranty of
16 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
17 * GNU General Public License for more details.
18 *
19 * You should have received a copy of the GNU General Public License
20 * along with MoleCuilder. If not, see <http://www.gnu.org/licenses/>.
21 */
22
23/*
24 * BindingModel.cpp
25 *
26 * Created on: Oct 5, 2016
27 * Author: heber
28 */
29
30
31// include config.h
32#ifdef HAVE_CONFIG_H
33#include <config.h>
34#endif
35
36#include "CodePatterns/MemDebug.hpp"
37
38#include "Potentials/BindingModel.hpp"
39
40static HomologyGraph::nodes_t getMapOfNodes(const BindingModel::vector_nodes_t &_nodes)
41{
42 HomologyGraph::nodes_t returnnodes;
43 for (BindingModel::vector_nodes_t::const_iterator iter = _nodes.begin();
44 iter != _nodes.end(); ++iter) {
45 std::pair<HomologyGraph::nodes_t::iterator, bool > inserter;
46 inserter = returnnodes.insert( std::make_pair(*iter, 1) );
47 if (!inserter.second)
48 ++(inserter.first->second);
49 }
50 return returnnodes;
51}
52
53BindingModel::BindingModel(
54 const BindingModel::vector_nodes_t &_nodes,
55 const HomologyGraph::edges_t &_edges) :
56 graph(getMapOfNodes(_nodes), _edges),
57 nodes(_nodes)
58{}
59
60
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