1 | /*
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2 | * Project: MoleCuilder
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3 | * Description: creates and alters molecular systems
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4 | * Copyright (C) 2010-2012 University of Bonn. All rights reserved.
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5 | *
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6 | *
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7 | * This file is part of MoleCuilder.
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8 | *
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9 | * MoleCuilder is free software: you can redistribute it and/or modify
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10 | * it under the terms of the GNU General Public License as published by
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11 | * the Free Software Foundation, either version 2 of the License, or
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12 | * (at your option) any later version.
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13 | *
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14 | * MoleCuilder is distributed in the hope that it will be useful,
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15 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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16 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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17 | * GNU General Public License for more details.
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18 | *
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19 | * You should have received a copy of the GNU General Public License
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20 | * along with MoleCuilder. If not, see <http://www.gnu.org/licenses/>.
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21 | */
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22 |
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23 | /*
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24 | * Psi3Parser_Parameters.cpp
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25 | *
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26 | * Created on: Feb 3, 2011
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27 | * Author: heber
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28 | */
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29 |
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30 | // include config.h
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31 | #ifdef HAVE_CONFIG_H
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32 | #include <config.h>
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33 | #endif
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34 |
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35 | #include "CodePatterns/MemDebug.hpp"
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36 |
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37 | #include <string>
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38 |
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39 | #include "CodePatterns/Assert.hpp"
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40 | #include "CodePatterns/Log.hpp"
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41 |
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42 | #include "Psi3Parser.hpp"
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43 |
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44 | #include "Psi3Parser_Parameters.hpp"
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45 |
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46 | #include "Parameters/Parameter.hpp"
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47 |
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48 | // TODO: Value<bool>::getAsString() must be defined inline otherwise we get multiple definition of virtual thunk compilation errors
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49 | template <>
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50 | inline const std::string Value<bool>::getAsString() const throw(ParameterValueException)
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51 | {
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52 | if(!ValueSet)
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53 | throw ParameterValueException();
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54 | if (value)
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55 | return std::string("yes");
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56 | else
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57 | return std::string("no");
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58 | }
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59 |
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60 | // TODO: Value<bool>::setAsString must be defined inline otherwise we get multiple definition of virtual thunk compilation errors
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61 | template <>
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62 | inline void Value<bool>::setAsString(const std::string _value) throw(ParameterException)
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63 | {
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64 | if (_value == std::string("yes")) {
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65 | set(true);
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66 | } else if (_value == std::string("no")) {
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67 | set(false);
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68 | } else {
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69 | throw ParameterValueException();
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70 | }
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71 | }
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72 |
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73 |
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74 | Psi3Parser_Parameters::Psi3Parser_Parameters()
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75 | {
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76 | Init();
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77 | }
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78 |
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79 | void Psi3Parser_Parameters::Init()
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80 | {
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81 | // add all known basis
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82 | //initBasis();
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83 |
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84 | // add all parameter names
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85 | {
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86 | ParamNames.clear();
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87 | ParamNames.resize(unknownParam);
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88 | ParamNames[labelParam] = "label";
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89 | ParamNames[jobtypeParam] = "jobtype";
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90 | ParamNames[wavefunctionParam] = "wfn";
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91 | ParamNames[maxiterParam] = "maxiter";
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92 | ParamNames[referenceParam] = "reference";
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93 | ParamNames[basisParam] = "basis";
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94 | ParamNames[freeze_coreParam] = "freeze_core";
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95 | ParamNames[unitsParam] = "units";
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96 | ParamNames[dertypeParam] = "dertype";
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97 | ParamNames[originParam] = "origin";
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98 | ParamNames[multiplicityParam] = "multp";
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99 | ParamNames[chargeParam] = "charge";
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100 | ParamNames[soccParam] = "socc";
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101 | ParamNames[doccParam] = "docc";
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102 | ParamNames[subgroupParam] = "subgroup";
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103 | ParamNames[unique_axisParam] = "unique_axis";
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104 | }
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105 |
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106 | // create freeze_core parameter
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107 | {
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108 | ValidFreezeCore.clear();
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109 | ValidFreezeCore.resize(unknownFreezeCore);
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110 | ValidFreezeCore[YES]="yes";
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111 | ValidFreezeCore[TRUE]="true";
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112 | ValidFreezeCore[NO]="no";
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113 | ValidFreezeCore[FALSE]="false";
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114 | ValidFreezeCore[SMALL]="small";
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115 | ValidFreezeCore[LARGE]="large";
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116 | appendParameter(
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117 | new Parameter<std::string>(
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118 | ParamNames[freeze_coreParam],
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119 | ValidFreezeCore,
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120 | ValidFreezeCore[YES]));
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121 | }
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122 |
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123 | // create units parameter
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124 | {
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125 | ValidUnits.clear();
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126 | ValidUnits.resize(unknownUnits);
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127 | ValidUnits[angstrom]="angstrom";
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128 | ValidUnits[bohr]="bohr";
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129 | appendParameter(
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130 | new Parameter<std::string>(
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131 | ParamNames[unitsParam],
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132 | ValidUnits,
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133 | ValidUnits[angstrom]));
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134 | }
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135 |
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136 | // create dertype parameter
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137 | {
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138 | ValidDerivativeType.clear();
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139 | ValidDerivativeType.resize(unknownDerivativeType);
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140 | ValidDerivativeType[NONE]="none";
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141 | appendParameter(
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142 | new Parameter<std::string>(
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143 | ParamNames[dertypeParam],
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144 | ValidDerivativeType,
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145 | ValidDerivativeType[NONE]));
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146 | }
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147 |
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148 | // create unique_axis parameter
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149 | {
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150 | ValidUniqueAxis.clear();
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151 | ValidUniqueAxis.resize(unknownUniqueAxis);
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152 | ValidUniqueAxis[X]="x";
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153 | ValidUniqueAxis[Y]="y";
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154 | ValidUniqueAxis[Z]="z";
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155 | appendParameter(
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156 | new Parameter<std::string>(
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157 | ParamNames[unique_axisParam],
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158 | ValidUniqueAxis,
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159 | ValidUniqueAxis[X]));
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160 | }
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161 |
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162 | // create jobtype parameter
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163 | {
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164 | ValidJobtypes.clear();
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165 | ValidJobtypes.resize(unknownJobtype);
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166 | ValidJobtypes[SP]="sp";
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167 | ValidJobtypes[OPT]="opt";
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168 | ValidJobtypes[DISP]="disp";
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169 | ValidJobtypes[FREQ]="freq";
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170 | ValidJobtypes[SYMM_FREQ]="symm_freq";
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171 | ValidJobtypes[DBOC]="dboc";
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172 | ValidJobtypes[RESPONSE]="response";
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173 | appendParameter(
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174 | new Parameter<std::string>(
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175 | ParamNames[jobtypeParam],
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176 | ValidJobtypes,
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177 | ValidJobtypes[SP]));
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178 | }
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179 |
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180 | // create wavefunction parameter
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181 | {
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182 | ValidWavefunction.clear();
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183 | ValidWavefunction.resize(unknownWavefunction);
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184 | ValidWavefunction[SCF]="scf";
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185 | ValidWavefunction[MP2]="mp2";
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186 | ValidWavefunction[MP2R12]="mp2r12";
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187 | ValidWavefunction[CIS]="cis";
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188 | ValidWavefunction[DETCI]="detci";
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189 | ValidWavefunction[CASSCF]="casscf";
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190 | ValidWavefunction[RASSCF]="rasscf";
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191 | ValidWavefunction[CCSD]="ccsd";
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192 | ValidWavefunction[CCSD_T]="ccsd_t";
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193 | ValidWavefunction[BCCD]="bccd";
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194 | ValidWavefunction[BCCD_T]="bccd_t";
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195 | ValidWavefunction[EOM_CCSD]="eom_ccsd";
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196 | ValidWavefunction[ZAPTN]="zaptn";
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197 | appendParameter(
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198 | new Parameter<std::string>(
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199 | ParamNames[wavefunctionParam],
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200 | ValidWavefunction,
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201 | ValidWavefunction[SCF]));
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202 | }
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203 |
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204 | // create reference parameter
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205 | {
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206 | ValidReference.clear();
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207 | ValidReference.resize(unknownReference);
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208 | ValidReference[RHF]="rhf";
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209 | ValidReference[ROHF]="rohf";
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210 | ValidReference[UHF]="uhf";
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211 | ValidReference[TWOCON]="twocon";
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212 | appendParameter(
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213 | new Parameter<std::string>(
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214 | ParamNames[referenceParam],
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215 | ValidReference,
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216 | ValidReference[RHF]));
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217 | }
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218 |
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219 | // add all continuous parameters
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220 | {
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221 | appendParameter(new Parameter<string>(ParamNames[labelParam], std::string("unknown job")));
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222 | appendParameter(new Parameter<int>(ParamNames[maxiterParam], 80));
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223 | appendParameter(new Parameter<string>(ParamNames[basisParam], std::string("cc-pVTZ")));
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224 | appendParameter(new Parameter<string>(ParamNames[originParam], std::string("(0.0\t0.0\t0.0)"))); // TODO: this should be a vector
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225 | appendParameter(new Parameter<int>(ParamNames[multiplicityParam], 1));
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226 | appendParameter(new Parameter<int>(ParamNames[chargeParam], 0));
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227 | appendParameter(new Parameter<string>(ParamNames[soccParam], std::string("()")));
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228 | appendParameter(new Parameter<string>(ParamNames[doccParam], std::string("()")));
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229 | appendParameter(new Parameter<string>(ParamNames[subgroupParam], std::string("")));
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230 | }
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231 | }
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232 |
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233 | Psi3Parser_Parameters::~Psi3Parser_Parameters()
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234 | {}
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235 |
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236 | /** Getter for a specific Parameter.
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237 | *
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238 | * @param param index among enum Parameters
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239 | * @return value of the desired Parameters
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240 | */
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241 | const std::string Psi3Parser_Parameters::getParameter(const enum Parameters param) const
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242 | {
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243 | return FormatParser_Parameters::getParameter(ParamNames[param])->getAsString();
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244 | }
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245 |
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246 | /** Setter for a specific Parameter.
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247 | *
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248 | * @param param index among enum Parameters
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249 | * @param _value value to set desired Parameter to
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250 | */
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251 | void Psi3Parser_Parameters::setParameter(const enum Parameters param, const std::string &_value)
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252 | {
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253 | const std::string &name = getParameterName(param);
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254 | FormatParser_Parameters::getParameter(name)->setAsString(_value);
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255 | }
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256 |
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257 | /** Getter for name of a specific Parameter.
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258 | *
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259 | * @param param index among enum Parameters
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260 | * @return name of the desired Parameter
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261 | */
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262 | const std::string &Psi3Parser_Parameters::getParameterName(const enum Parameters param) const
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263 | {
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264 | return ParamNames[param];
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265 | }
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266 |
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267 | /** Getter for name of a specific Reference.
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268 | *
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269 | * @param reference index among enum Reference
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270 | * @return name of the desired Reference
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271 | */
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272 | const std::string &Psi3Parser_Parameters::getReferenceName(const enum Reference reference) const
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273 | {
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274 | return ValidReference[reference];
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275 | }
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276 |
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277 | /** Checks whether all elements in the world also have parameters in the basis.
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278 | *
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279 | * @return true - all elements parametrized, false - at least one element is missing.
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280 | */
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281 | bool Psi3Parser_Parameters::checkWorldElementsAgainstCurrentBasis() const
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282 | {
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283 | ELOG(0, "Psi3Parser_Parameters::checkWorldElementsAgainstCurrentBasis() - not implemented yet.");
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284 |
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285 | return false;
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286 | }
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287 |
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