source: src/Parser/Psi3Parser_Parameters.cpp@ 118f1e

Action_Thermostats Add_AtomRandomPerturbation Add_FitFragmentPartialChargesAction Add_RotateAroundBondAction Add_SelectAtomByNameAction Added_ParseSaveFragmentResults AddingActions_SaveParseParticleParameters Adding_Graph_to_ChangeBondActions Adding_MD_integration_tests Adding_ParticleName_to_Atom Adding_StructOpt_integration_tests AtomFragments Automaking_mpqc_open AutomationFragmentation_failures Candidate_v1.5.4 Candidate_v1.6.0 Candidate_v1.6.1 ChangeBugEmailaddress ChangingTestPorts ChemicalSpaceEvaluator CombiningParticlePotentialParsing Combining_Subpackages Debian_Package_split Debian_package_split_molecuildergui_only Disabling_MemDebug Docu_Python_wait EmpiricalPotential_contain_HomologyGraph EmpiricalPotential_contain_HomologyGraph_documentation Enable_parallel_make_install Enhance_userguide Enhanced_StructuralOptimization Enhanced_StructuralOptimization_continued Example_ManyWaysToTranslateAtom Exclude_Hydrogens_annealWithBondGraph FitPartialCharges_GlobalError Fix_BoundInBox_CenterInBox_MoleculeActions Fix_ChargeSampling_PBC Fix_ChronosMutex Fix_FitPartialCharges Fix_FitPotential_needs_atomicnumbers Fix_ForceAnnealing Fix_IndependentFragmentGrids Fix_ParseParticles Fix_ParseParticles_split_forward_backward_Actions Fix_PopActions Fix_QtFragmentList_sorted_selection Fix_Restrictedkeyset_FragmentMolecule Fix_StatusMsg Fix_StepWorldTime_single_argument Fix_Verbose_Codepatterns Fix_fitting_potentials Fixes ForceAnnealing_goodresults ForceAnnealing_oldresults ForceAnnealing_tocheck ForceAnnealing_with_BondGraph ForceAnnealing_with_BondGraph_continued ForceAnnealing_with_BondGraph_continued_betteresults ForceAnnealing_with_BondGraph_contraction-expansion FragmentAction_writes_AtomFragments FragmentMolecule_checks_bonddegrees GeometryObjects Gui_Fixes Gui_displays_atomic_force_velocity ImplicitCharges IndependentFragmentGrids IndependentFragmentGrids_IndividualZeroInstances IndependentFragmentGrids_IntegrationTest IndependentFragmentGrids_Sole_NN_Calculation JobMarket_RobustOnKillsSegFaults JobMarket_StableWorkerPool JobMarket_unresolvable_hostname_fix MoreRobust_FragmentAutomation ODR_violation_mpqc_open PartialCharges_OrthogonalSummation PdbParser_setsAtomName PythonUI_with_named_parameters QtGui_reactivate_TimeChanged_changes Recreated_GuiChecks Rewrite_FitPartialCharges RotateToPrincipalAxisSystem_UndoRedo SaturateAtoms_findBestMatching SaturateAtoms_singleDegree StoppableMakroAction Subpackage_CodePatterns Subpackage_JobMarket Subpackage_LinearAlgebra Subpackage_levmar Subpackage_mpqc_open Subpackage_vmg Switchable_LogView ThirdParty_MPQC_rebuilt_buildsystem TrajectoryDependenant_MaxOrder TremoloParser_IncreasedPrecision TremoloParser_MultipleTimesteps TremoloParser_setsAtomName Ubuntu_1604_changes stable
Last change on this file since 118f1e was 118f1e, checked in by Michael Ankele <ankele@…>, 13 years ago

ParameterStorage now uses ParameterAsString class

  • Property mode set to 100644
File size: 7.8 KB
Line 
1/*
2 * Project: MoleCuilder
3 * Description: creates and alters molecular systems
4 * Copyright (C) 2010-2012 University of Bonn. All rights reserved.
5 * Please see the LICENSE file or "Copyright notice" in builder.cpp for details.
6 */
7
8/*
9 * Psi3Parser_Parameters.cpp
10 *
11 * Created on: Feb 3, 2011
12 * Author: heber
13 */
14
15// include config.h
16#ifdef HAVE_CONFIG_H
17#include <config.h>
18#endif
19
20#include "CodePatterns/MemDebug.hpp"
21
22#include <string>
23
24#include "CodePatterns/Assert.hpp"
25#include "CodePatterns/Log.hpp"
26
27#include "Psi3Parser.hpp"
28
29#include "Psi3Parser_Parameters.hpp"
30
31#include "Parameters/Parameter.hpp"
32
33// TODO: Value<bool>::getAsString() must be defined inline otherwise we get multiple definition of virtual thunk compilation errors
34template <>
35inline const std::string Value<bool>::getAsString() const
36{
37 ASSERT(ValueSet,
38 "Value<bool>::getAsString() - requesting unset value.");
39 if (value)
40 return std::string("yes");
41 else
42 return std::string("no");
43}
44
45// TODO: Value<bool>::setAsString must be defined inline otherwise we get multiple definition of virtual thunk compilation errors
46template <>
47inline void Value<bool>::setAsString(const std::string _value)
48{
49 if (_value == std::string("yes")) {
50 set(true);
51 } else if (_value == std::string("no")) {
52 set(false);
53 } else {
54 ASSERT(0,
55 "void ContinuousValue<bool>::set() - value "+_value+" is neither yes or no.");
56 }
57}
58
59
60Psi3Parser_Parameters::Psi3Parser_Parameters()
61{
62 Init();
63}
64
65void Psi3Parser_Parameters::Init()
66{
67 // add all known basis
68 //initBasis();
69
70 // add all parameter names
71 {
72 ParamNames.clear();
73 ParamNames.resize(unknownParam);
74 ParamNames[labelParam] = "label";
75 ParamNames[jobtypeParam] = "jobtype";
76 ParamNames[wavefunctionParam] = "wfn";
77 ParamNames[maxiterParam] = "maxiter";
78 ParamNames[referenceParam] = "reference";
79 ParamNames[basisParam] = "basis";
80 ParamNames[freeze_coreParam] = "freeze_core";
81 ParamNames[unitsParam] = "units";
82 ParamNames[dertypeParam] = "dertype";
83 ParamNames[originParam] = "origin";
84 ParamNames[multiplicityParam] = "multp";
85 ParamNames[chargeParam] = "charge";
86 ParamNames[soccParam] = "socc";
87 ParamNames[doccParam] = "docc";
88 ParamNames[subgroupParam] = "subgroup";
89 ParamNames[unique_axisParam] = "unique_axis";
90 }
91
92 // create freeze_core parameter
93 {
94 ValidFreezeCore.clear();
95 ValidFreezeCore.resize(unknownFreezeCore);
96 ValidFreezeCore[YES]="yes";
97 ValidFreezeCore[TRUE]="true";
98 ValidFreezeCore[NO]="no";
99 ValidFreezeCore[FALSE]="false";
100 ValidFreezeCore[SMALL]="small";
101 ValidFreezeCore[LARGE]="large";
102 appendParameter(
103 new Parameter<std::string>(
104 ParamNames[freeze_coreParam],
105 ValidFreezeCore,
106 ValidFreezeCore[YES]));
107 }
108
109 // create units parameter
110 {
111 ValidUnits.clear();
112 ValidUnits.resize(unknownUnits);
113 ValidUnits[angstrom]="angstrom";
114 ValidUnits[bohr]="bohr";
115 appendParameter(
116 new Parameter<std::string>(
117 ParamNames[unitsParam],
118 ValidUnits,
119 ValidUnits[angstrom]));
120 }
121
122 // create dertype parameter
123 {
124 ValidDerivativeType.clear();
125 ValidDerivativeType.resize(unknownDerivativeType);
126 ValidDerivativeType[NONE]="none";
127 appendParameter(
128 new Parameter<std::string>(
129 ParamNames[dertypeParam],
130 ValidDerivativeType,
131 ValidDerivativeType[NONE]));
132 }
133
134 // create unique_axis parameter
135 {
136 ValidUniqueAxis.clear();
137 ValidUniqueAxis.resize(unknownUniqueAxis);
138 ValidUniqueAxis[X]="x";
139 ValidUniqueAxis[Y]="y";
140 ValidUniqueAxis[Z]="z";
141 appendParameter(
142 new Parameter<std::string>(
143 ParamNames[unique_axisParam],
144 ValidUniqueAxis,
145 ValidUniqueAxis[X]));
146 }
147
148 // create jobtype parameter
149 {
150 ValidJobtypes.clear();
151 ValidJobtypes.resize(unknownJobtype);
152 ValidJobtypes[SP]="sp";
153 ValidJobtypes[OPT]="opt";
154 ValidJobtypes[DISP]="disp";
155 ValidJobtypes[FREQ]="freq";
156 ValidJobtypes[SYMM_FREQ]="symm_freq";
157 ValidJobtypes[DBOC]="dboc";
158 ValidJobtypes[RESPONSE]="response";
159 appendParameter(
160 new Parameter<std::string>(
161 ParamNames[jobtypeParam],
162 ValidJobtypes,
163 ValidJobtypes[SP]));
164 }
165
166 // create wavefunction parameter
167 {
168 ValidWavefunction.clear();
169 ValidWavefunction.resize(unknownWavefunction);
170 ValidWavefunction[SCF]="scf";
171 ValidWavefunction[MP2]="mp2";
172 ValidWavefunction[MP2R12]="mp2r12";
173 ValidWavefunction[CIS]="cis";
174 ValidWavefunction[DETCI]="detci";
175 ValidWavefunction[CASSCF]="casscf";
176 ValidWavefunction[RASSCF]="rasscf";
177 ValidWavefunction[CCSD]="ccsd";
178 ValidWavefunction[CCSD_T]="ccsd_t";
179 ValidWavefunction[BCCD]="bccd";
180 ValidWavefunction[BCCD_T]="bccd_t";
181 ValidWavefunction[EOM_CCSD]="eom_ccsd";
182 ValidWavefunction[ZAPTN]="zaptn";
183 appendParameter(
184 new Parameter<std::string>(
185 ParamNames[wavefunctionParam],
186 ValidWavefunction,
187 ValidWavefunction[SCF]));
188 }
189
190 // create reference parameter
191 {
192 ValidReference.clear();
193 ValidReference.resize(unknownReference);
194 ValidReference[RHF]="rhf";
195 ValidReference[ROHF]="rohf";
196 ValidReference[UHF]="uhf";
197 ValidReference[TWOCON]="twocon";
198 appendParameter(
199 new Parameter<std::string>(
200 ParamNames[referenceParam],
201 ValidReference,
202 ValidReference[RHF]));
203 }
204
205 // add all continuous parameters
206 {
207 appendParameter(new Parameter<string>(ParamNames[labelParam], std::string("unknown job")));
208 appendParameter(new Parameter<int>(ParamNames[maxiterParam], 80));
209 appendParameter(new Parameter<string>(ParamNames[basisParam], std::string("cc-pVTZ")));
210 appendParameter(new Parameter<string>(ParamNames[originParam], std::string("(0.0\t0.0\t0.0)"))); // TODO: this should be a vector
211 appendParameter(new Parameter<int>(ParamNames[multiplicityParam], 1));
212 appendParameter(new Parameter<int>(ParamNames[chargeParam], 0));
213 appendParameter(new Parameter<string>(ParamNames[soccParam], std::string("()")));
214 appendParameter(new Parameter<string>(ParamNames[doccParam], std::string("()")));
215 appendParameter(new Parameter<string>(ParamNames[subgroupParam], std::string("")));
216 }
217}
218
219Psi3Parser_Parameters::~Psi3Parser_Parameters()
220{}
221
222/** Getter for a specific Parameter.
223 *
224 * @param param index among enum Parameters
225 * @return value of the desired Parameters
226 */
227const std::string Psi3Parser_Parameters::getParameter(const enum Parameters param) const
228{
229 return FormatParser_Parameters::getParameter(ParamNames[param])->getAsString();
230}
231
232/** Setter for a specific Parameter.
233 *
234 * @param param index among enum Parameters
235 * @param _value value to set desired Parameter to
236 */
237void Psi3Parser_Parameters::setParameter(const enum Parameters param, const std::string &_value)
238{
239 const std::string &name = getParameterName(param);
240 FormatParser_Parameters::getParameter(name)->setAsString(_value);
241}
242
243/** Getter for name of a specific Parameter.
244 *
245 * @param param index among enum Parameters
246 * @return name of the desired Parameter
247 */
248const std::string &Psi3Parser_Parameters::getParameterName(const enum Parameters param) const
249{
250 return ParamNames[param];
251}
252
253/** Getter for name of a specific Reference.
254 *
255 * @param reference index among enum Reference
256 * @return name of the desired Reference
257 */
258const std::string &Psi3Parser_Parameters::getReferenceName(const enum Reference reference) const
259{
260 return ValidReference[reference];
261}
262
263/** Checks whether all elements in the world also have parameters in the basis.
264 *
265 * @return true - all elements parametrized, false - at least one element is missing.
266 */
267bool Psi3Parser_Parameters::checkWorldElementsAgainstCurrentBasis() const
268{
269 ELOG(0, "Psi3Parser_Parameters::checkWorldElementsAgainstCurrentBasis() - not implemented yet.");
270
271 return false;
272}
273
Note: See TracBrowser for help on using the repository browser.