| [1bef07] | 1 | /* | 
|---|
|  | 2 | * Project: MoleCuilder | 
|---|
|  | 3 | * Description: creates and alters molecular systems | 
|---|
| [0aa122] | 4 | * Copyright (C)  2010-2012 University of Bonn. All rights reserved. | 
|---|
| [94d5ac6] | 5 | * | 
|---|
|  | 6 | * | 
|---|
|  | 7 | *   This file is part of MoleCuilder. | 
|---|
|  | 8 | * | 
|---|
|  | 9 | *    MoleCuilder is free software: you can redistribute it and/or modify | 
|---|
|  | 10 | *    it under the terms of the GNU General Public License as published by | 
|---|
|  | 11 | *    the Free Software Foundation, either version 2 of the License, or | 
|---|
|  | 12 | *    (at your option) any later version. | 
|---|
|  | 13 | * | 
|---|
|  | 14 | *    MoleCuilder is distributed in the hope that it will be useful, | 
|---|
|  | 15 | *    but WITHOUT ANY WARRANTY; without even the implied warranty of | 
|---|
|  | 16 | *    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | 
|---|
|  | 17 | *    GNU General Public License for more details. | 
|---|
|  | 18 | * | 
|---|
|  | 19 | *    You should have received a copy of the GNU General Public License | 
|---|
|  | 20 | *    along with MoleCuilder.  If not, see <http://www.gnu.org/licenses/>. | 
|---|
| [1bef07] | 21 | */ | 
|---|
|  | 22 |  | 
|---|
|  | 23 | /* | 
|---|
|  | 24 | * Psi3Parser_Parameters.cpp | 
|---|
|  | 25 | * | 
|---|
|  | 26 | *  Created on: Feb 3, 2011 | 
|---|
|  | 27 | *      Author: heber | 
|---|
|  | 28 | */ | 
|---|
|  | 29 |  | 
|---|
|  | 30 | // include config.h | 
|---|
|  | 31 | #ifdef HAVE_CONFIG_H | 
|---|
|  | 32 | #include <config.h> | 
|---|
|  | 33 | #endif | 
|---|
|  | 34 |  | 
|---|
|  | 35 | #include "CodePatterns/MemDebug.hpp" | 
|---|
|  | 36 |  | 
|---|
| [7f570c] | 37 | #include <string> | 
|---|
|  | 38 |  | 
|---|
|  | 39 | #include "CodePatterns/Assert.hpp" | 
|---|
| [1bef07] | 40 | #include "CodePatterns/Log.hpp" | 
|---|
|  | 41 |  | 
|---|
|  | 42 | #include "Psi3Parser.hpp" | 
|---|
|  | 43 |  | 
|---|
|  | 44 | #include "Psi3Parser_Parameters.hpp" | 
|---|
|  | 45 |  | 
|---|
| [118f1e] | 46 | #include "Parameters/Parameter.hpp" | 
|---|
| [1bef07] | 47 |  | 
|---|
| [118f1e] | 48 | // TODO: Value<bool>::getAsString() must be defined inline otherwise we get multiple definition of virtual thunk compilation errors | 
|---|
| [1bef07] | 49 | template <> | 
|---|
| [e45c1d] | 50 | inline const std::string Value<bool>::getAsString() const throw(ParameterValueException) | 
|---|
| [1bef07] | 51 | { | 
|---|
| [e45c1d] | 52 | if(!ValueSet) | 
|---|
|  | 53 | throw ParameterValueException(); | 
|---|
| [1bef07] | 54 | if (value) | 
|---|
|  | 55 | return std::string("yes"); | 
|---|
|  | 56 | else | 
|---|
|  | 57 | return std::string("no"); | 
|---|
|  | 58 | } | 
|---|
|  | 59 |  | 
|---|
| [118f1e] | 60 | // TODO: Value<bool>::setAsString must be defined inline otherwise we get multiple definition of virtual thunk compilation errors | 
|---|
| [1bef07] | 61 | template <> | 
|---|
| [e45c1d] | 62 | inline void Value<bool>::setAsString(const std::string _value) throw(ParameterException) | 
|---|
| [1bef07] | 63 | { | 
|---|
|  | 64 | if (_value == std::string("yes")) { | 
|---|
| [118f1e] | 65 | set(true); | 
|---|
| [1bef07] | 66 | } else if (_value == std::string("no")) { | 
|---|
| [118f1e] | 67 | set(false); | 
|---|
| [1bef07] | 68 | } else { | 
|---|
| [e45c1d] | 69 | throw ParameterValueException(); | 
|---|
| [1bef07] | 70 | } | 
|---|
|  | 71 | } | 
|---|
|  | 72 |  | 
|---|
|  | 73 |  | 
|---|
|  | 74 | Psi3Parser_Parameters::Psi3Parser_Parameters() | 
|---|
|  | 75 | { | 
|---|
|  | 76 | Init(); | 
|---|
|  | 77 | } | 
|---|
|  | 78 |  | 
|---|
|  | 79 | void Psi3Parser_Parameters::Init() | 
|---|
|  | 80 | { | 
|---|
|  | 81 | // add all known basis | 
|---|
|  | 82 | //initBasis(); | 
|---|
|  | 83 |  | 
|---|
|  | 84 | // add all parameter names | 
|---|
|  | 85 | { | 
|---|
|  | 86 | ParamNames.clear(); | 
|---|
|  | 87 | ParamNames.resize(unknownParam); | 
|---|
|  | 88 | ParamNames[labelParam] = "label"; | 
|---|
|  | 89 | ParamNames[jobtypeParam] = "jobtype"; | 
|---|
|  | 90 | ParamNames[wavefunctionParam] = "wfn"; | 
|---|
|  | 91 | ParamNames[maxiterParam] = "maxiter"; | 
|---|
|  | 92 | ParamNames[referenceParam] = "reference"; | 
|---|
|  | 93 | ParamNames[basisParam] = "basis"; | 
|---|
|  | 94 | ParamNames[freeze_coreParam] = "freeze_core"; | 
|---|
|  | 95 | ParamNames[unitsParam] = "units"; | 
|---|
|  | 96 | ParamNames[dertypeParam] = "dertype"; | 
|---|
|  | 97 | ParamNames[originParam] = "origin"; | 
|---|
| [a67cf0] | 98 | ParamNames[multiplicityParam] = "multp"; | 
|---|
| [1bef07] | 99 | ParamNames[chargeParam] = "charge"; | 
|---|
|  | 100 | ParamNames[soccParam] = "socc"; | 
|---|
|  | 101 | ParamNames[doccParam] = "docc"; | 
|---|
|  | 102 | ParamNames[subgroupParam] = "subgroup"; | 
|---|
|  | 103 | ParamNames[unique_axisParam] = "unique_axis"; | 
|---|
|  | 104 | } | 
|---|
|  | 105 |  | 
|---|
|  | 106 | // create freeze_core parameter | 
|---|
|  | 107 | { | 
|---|
|  | 108 | ValidFreezeCore.clear(); | 
|---|
|  | 109 | ValidFreezeCore.resize(unknownFreezeCore); | 
|---|
|  | 110 | ValidFreezeCore[YES]="yes"; | 
|---|
|  | 111 | ValidFreezeCore[TRUE]="true"; | 
|---|
|  | 112 | ValidFreezeCore[NO]="no"; | 
|---|
|  | 113 | ValidFreezeCore[FALSE]="false"; | 
|---|
|  | 114 | ValidFreezeCore[SMALL]="small"; | 
|---|
|  | 115 | ValidFreezeCore[LARGE]="large"; | 
|---|
|  | 116 | appendParameter( | 
|---|
| [118f1e] | 117 | new Parameter<std::string>( | 
|---|
| [1bef07] | 118 | ParamNames[freeze_coreParam], | 
|---|
|  | 119 | ValidFreezeCore, | 
|---|
|  | 120 | ValidFreezeCore[YES])); | 
|---|
|  | 121 | } | 
|---|
|  | 122 |  | 
|---|
|  | 123 | // create units parameter | 
|---|
|  | 124 | { | 
|---|
|  | 125 | ValidUnits.clear(); | 
|---|
|  | 126 | ValidUnits.resize(unknownUnits); | 
|---|
|  | 127 | ValidUnits[angstrom]="angstrom"; | 
|---|
|  | 128 | ValidUnits[bohr]="bohr"; | 
|---|
|  | 129 | appendParameter( | 
|---|
| [118f1e] | 130 | new Parameter<std::string>( | 
|---|
| [1bef07] | 131 | ParamNames[unitsParam], | 
|---|
|  | 132 | ValidUnits, | 
|---|
|  | 133 | ValidUnits[angstrom])); | 
|---|
|  | 134 | } | 
|---|
|  | 135 |  | 
|---|
|  | 136 | // create dertype parameter | 
|---|
|  | 137 | { | 
|---|
|  | 138 | ValidDerivativeType.clear(); | 
|---|
|  | 139 | ValidDerivativeType.resize(unknownDerivativeType); | 
|---|
|  | 140 | ValidDerivativeType[NONE]="none"; | 
|---|
|  | 141 | appendParameter( | 
|---|
| [118f1e] | 142 | new Parameter<std::string>( | 
|---|
| [1bef07] | 143 | ParamNames[dertypeParam], | 
|---|
|  | 144 | ValidDerivativeType, | 
|---|
|  | 145 | ValidDerivativeType[NONE])); | 
|---|
|  | 146 | } | 
|---|
|  | 147 |  | 
|---|
|  | 148 | // create unique_axis parameter | 
|---|
|  | 149 | { | 
|---|
|  | 150 | ValidUniqueAxis.clear(); | 
|---|
|  | 151 | ValidUniqueAxis.resize(unknownUniqueAxis); | 
|---|
|  | 152 | ValidUniqueAxis[X]="x"; | 
|---|
|  | 153 | ValidUniqueAxis[Y]="y"; | 
|---|
|  | 154 | ValidUniqueAxis[Z]="z"; | 
|---|
|  | 155 | appendParameter( | 
|---|
| [118f1e] | 156 | new Parameter<std::string>( | 
|---|
| [1bef07] | 157 | ParamNames[unique_axisParam], | 
|---|
|  | 158 | ValidUniqueAxis, | 
|---|
|  | 159 | ValidUniqueAxis[X])); | 
|---|
|  | 160 | } | 
|---|
|  | 161 |  | 
|---|
|  | 162 | // create jobtype parameter | 
|---|
|  | 163 | { | 
|---|
|  | 164 | ValidJobtypes.clear(); | 
|---|
|  | 165 | ValidJobtypes.resize(unknownJobtype); | 
|---|
|  | 166 | ValidJobtypes[SP]="sp"; | 
|---|
|  | 167 | ValidJobtypes[OPT]="opt"; | 
|---|
|  | 168 | ValidJobtypes[DISP]="disp"; | 
|---|
|  | 169 | ValidJobtypes[FREQ]="freq"; | 
|---|
|  | 170 | ValidJobtypes[SYMM_FREQ]="symm_freq"; | 
|---|
|  | 171 | ValidJobtypes[DBOC]="dboc"; | 
|---|
|  | 172 | ValidJobtypes[RESPONSE]="response"; | 
|---|
|  | 173 | appendParameter( | 
|---|
| [118f1e] | 174 | new Parameter<std::string>( | 
|---|
| [1bef07] | 175 | ParamNames[jobtypeParam], | 
|---|
|  | 176 | ValidJobtypes, | 
|---|
|  | 177 | ValidJobtypes[SP])); | 
|---|
|  | 178 | } | 
|---|
|  | 179 |  | 
|---|
|  | 180 | // create wavefunction parameter | 
|---|
|  | 181 | { | 
|---|
|  | 182 | ValidWavefunction.clear(); | 
|---|
|  | 183 | ValidWavefunction.resize(unknownWavefunction); | 
|---|
|  | 184 | ValidWavefunction[SCF]="scf"; | 
|---|
|  | 185 | ValidWavefunction[MP2]="mp2"; | 
|---|
|  | 186 | ValidWavefunction[MP2R12]="mp2r12"; | 
|---|
|  | 187 | ValidWavefunction[CIS]="cis"; | 
|---|
|  | 188 | ValidWavefunction[DETCI]="detci"; | 
|---|
|  | 189 | ValidWavefunction[CASSCF]="casscf"; | 
|---|
|  | 190 | ValidWavefunction[RASSCF]="rasscf"; | 
|---|
|  | 191 | ValidWavefunction[CCSD]="ccsd"; | 
|---|
|  | 192 | ValidWavefunction[CCSD_T]="ccsd_t"; | 
|---|
|  | 193 | ValidWavefunction[BCCD]="bccd"; | 
|---|
|  | 194 | ValidWavefunction[BCCD_T]="bccd_t"; | 
|---|
|  | 195 | ValidWavefunction[EOM_CCSD]="eom_ccsd"; | 
|---|
|  | 196 | ValidWavefunction[ZAPTN]="zaptn"; | 
|---|
|  | 197 | appendParameter( | 
|---|
| [118f1e] | 198 | new Parameter<std::string>( | 
|---|
| [1bef07] | 199 | ParamNames[wavefunctionParam], | 
|---|
|  | 200 | ValidWavefunction, | 
|---|
|  | 201 | ValidWavefunction[SCF])); | 
|---|
|  | 202 | } | 
|---|
|  | 203 |  | 
|---|
|  | 204 | // create reference parameter | 
|---|
|  | 205 | { | 
|---|
|  | 206 | ValidReference.clear(); | 
|---|
|  | 207 | ValidReference.resize(unknownReference); | 
|---|
|  | 208 | ValidReference[RHF]="rhf"; | 
|---|
|  | 209 | ValidReference[ROHF]="rohf"; | 
|---|
|  | 210 | ValidReference[UHF]="uhf"; | 
|---|
|  | 211 | ValidReference[TWOCON]="twocon"; | 
|---|
|  | 212 | appendParameter( | 
|---|
| [118f1e] | 213 | new Parameter<std::string>( | 
|---|
| [1bef07] | 214 | ParamNames[referenceParam], | 
|---|
|  | 215 | ValidReference, | 
|---|
|  | 216 | ValidReference[RHF])); | 
|---|
|  | 217 | } | 
|---|
|  | 218 |  | 
|---|
|  | 219 | // add all continuous parameters | 
|---|
|  | 220 | { | 
|---|
| [118f1e] | 221 | appendParameter(new Parameter<string>(ParamNames[labelParam], std::string("unknown job"))); | 
|---|
|  | 222 | appendParameter(new Parameter<int>(ParamNames[maxiterParam], 80)); | 
|---|
|  | 223 | appendParameter(new Parameter<string>(ParamNames[basisParam], std::string("cc-pVTZ"))); | 
|---|
|  | 224 | appendParameter(new Parameter<string>(ParamNames[originParam], std::string("(0.0\t0.0\t0.0)"))); // TODO: this should be a vector | 
|---|
|  | 225 | appendParameter(new Parameter<int>(ParamNames[multiplicityParam], 1)); | 
|---|
|  | 226 | appendParameter(new Parameter<int>(ParamNames[chargeParam], 0)); | 
|---|
|  | 227 | appendParameter(new Parameter<string>(ParamNames[soccParam], std::string("()"))); | 
|---|
|  | 228 | appendParameter(new Parameter<string>(ParamNames[doccParam], std::string("()"))); | 
|---|
|  | 229 | appendParameter(new Parameter<string>(ParamNames[subgroupParam], std::string(""))); | 
|---|
| [1bef07] | 230 | } | 
|---|
|  | 231 | } | 
|---|
|  | 232 |  | 
|---|
|  | 233 | Psi3Parser_Parameters::~Psi3Parser_Parameters() | 
|---|
|  | 234 | {} | 
|---|
|  | 235 |  | 
|---|
|  | 236 | /** Getter for a specific Parameter. | 
|---|
|  | 237 | * | 
|---|
|  | 238 | * @param param index among enum Parameters | 
|---|
|  | 239 | * @return value of the desired Parameters | 
|---|
|  | 240 | */ | 
|---|
|  | 241 | const std::string Psi3Parser_Parameters::getParameter(const enum Parameters param) const | 
|---|
|  | 242 | { | 
|---|
| [118f1e] | 243 | return FormatParser_Parameters::getParameter(ParamNames[param])->getAsString(); | 
|---|
| [1bef07] | 244 | } | 
|---|
|  | 245 |  | 
|---|
|  | 246 | /** Setter for a specific Parameter. | 
|---|
|  | 247 | * | 
|---|
|  | 248 | * @param param index among enum Parameters | 
|---|
|  | 249 | * @param _value value to set desired Parameter to | 
|---|
|  | 250 | */ | 
|---|
|  | 251 | void Psi3Parser_Parameters::setParameter(const enum Parameters param, const std::string &_value) | 
|---|
|  | 252 | { | 
|---|
|  | 253 | const std::string &name = getParameterName(param); | 
|---|
| [118f1e] | 254 | FormatParser_Parameters::getParameter(name)->setAsString(_value); | 
|---|
| [1bef07] | 255 | } | 
|---|
|  | 256 |  | 
|---|
|  | 257 | /** Getter for name of a specific Parameter. | 
|---|
|  | 258 | * | 
|---|
|  | 259 | * @param param index among enum Parameters | 
|---|
|  | 260 | * @return name of the desired Parameter | 
|---|
|  | 261 | */ | 
|---|
|  | 262 | const std::string &Psi3Parser_Parameters::getParameterName(const enum Parameters param) const | 
|---|
|  | 263 | { | 
|---|
|  | 264 | return ParamNames[param]; | 
|---|
|  | 265 | } | 
|---|
|  | 266 |  | 
|---|
| [c17091] | 267 | /** Getter for name of a specific Reference. | 
|---|
|  | 268 | * | 
|---|
|  | 269 | * @param reference index among enum Reference | 
|---|
|  | 270 | * @return name of the desired Reference | 
|---|
|  | 271 | */ | 
|---|
|  | 272 | const std::string &Psi3Parser_Parameters::getReferenceName(const enum Reference reference) const | 
|---|
|  | 273 | { | 
|---|
|  | 274 | return ValidReference[reference]; | 
|---|
|  | 275 | } | 
|---|
|  | 276 |  | 
|---|
| [1bef07] | 277 | /** Checks whether all elements in the world also have parameters in the basis. | 
|---|
|  | 278 | * | 
|---|
|  | 279 | * @return true - all elements parametrized, false - at least one element is missing. | 
|---|
|  | 280 | */ | 
|---|
|  | 281 | bool Psi3Parser_Parameters::checkWorldElementsAgainstCurrentBasis() const | 
|---|
|  | 282 | { | 
|---|
| [47d041] | 283 | ELOG(0, "Psi3Parser_Parameters::checkWorldElementsAgainstCurrentBasis() - not implemented yet."); | 
|---|
| [1bef07] | 284 |  | 
|---|
|  | 285 | return false; | 
|---|
|  | 286 | } | 
|---|
|  | 287 |  | 
|---|