source: src/Parser/Makefile.am@ b3d687

Action_Thermostats Add_AtomRandomPerturbation Add_FitFragmentPartialChargesAction Add_RotateAroundBondAction Add_SelectAtomByNameAction Added_ParseSaveFragmentResults AddingActions_SaveParseParticleParameters Adding_Graph_to_ChangeBondActions Adding_MD_integration_tests Adding_ParticleName_to_Atom Adding_StructOpt_integration_tests AtomFragments Automaking_mpqc_open AutomationFragmentation_failures Candidate_v1.5.4 Candidate_v1.6.0 Candidate_v1.6.1 ChangeBugEmailaddress ChangingTestPorts ChemicalSpaceEvaluator CombiningParticlePotentialParsing Combining_Subpackages Debian_Package_split Debian_package_split_molecuildergui_only Disabling_MemDebug Docu_Python_wait EmpiricalPotential_contain_HomologyGraph EmpiricalPotential_contain_HomologyGraph_documentation Enable_parallel_make_install Enhance_userguide Enhanced_StructuralOptimization Enhanced_StructuralOptimization_continued Example_ManyWaysToTranslateAtom Exclude_Hydrogens_annealWithBondGraph FitPartialCharges_GlobalError Fix_BoundInBox_CenterInBox_MoleculeActions Fix_ChargeSampling_PBC Fix_ChronosMutex Fix_FitPartialCharges Fix_FitPotential_needs_atomicnumbers Fix_ForceAnnealing Fix_IndependentFragmentGrids Fix_ParseParticles Fix_ParseParticles_split_forward_backward_Actions Fix_PopActions Fix_QtFragmentList_sorted_selection Fix_Restrictedkeyset_FragmentMolecule Fix_StatusMsg Fix_StepWorldTime_single_argument Fix_Verbose_Codepatterns Fix_fitting_potentials Fixes ForceAnnealing_goodresults ForceAnnealing_oldresults ForceAnnealing_tocheck ForceAnnealing_with_BondGraph ForceAnnealing_with_BondGraph_continued ForceAnnealing_with_BondGraph_continued_betteresults ForceAnnealing_with_BondGraph_contraction-expansion FragmentAction_writes_AtomFragments FragmentMolecule_checks_bonddegrees GeometryObjects Gui_Fixes Gui_displays_atomic_force_velocity ImplicitCharges IndependentFragmentGrids IndependentFragmentGrids_IndividualZeroInstances IndependentFragmentGrids_IntegrationTest IndependentFragmentGrids_Sole_NN_Calculation JobMarket_RobustOnKillsSegFaults JobMarket_StableWorkerPool JobMarket_unresolvable_hostname_fix MoreRobust_FragmentAutomation ODR_violation_mpqc_open PartialCharges_OrthogonalSummation PdbParser_setsAtomName PythonUI_with_named_parameters QtGui_reactivate_TimeChanged_changes Recreated_GuiChecks Rewrite_FitPartialCharges RotateToPrincipalAxisSystem_UndoRedo SaturateAtoms_findBestMatching SaturateAtoms_singleDegree StoppableMakroAction Subpackage_CodePatterns Subpackage_JobMarket Subpackage_LinearAlgebra Subpackage_levmar Subpackage_mpqc_open Subpackage_vmg Switchable_LogView ThirdParty_MPQC_rebuilt_buildsystem TrajectoryDependenant_MaxOrder TremoloParser_IncreasedPrecision TremoloParser_MultipleTimesteps TremoloParser_setsAtomName Ubuntu_1604_changes stable
Last change on this file since b3d687 was d2596b, checked in by Frederik Heber <heber@…>, 13 years ago

Added XmlParser for parsing configurations for ScaFaCoS generic test code.

  • XML is parsed via pugixml which is placed in subfolder pugixml in src/Parser.
  • NOTE: pugixml does not import/export double with high enough precision. Hence, we always obtain strings and convert them ourselves.
  • also added unit test on the new parser.
  • NOTE: Unit test is failing as charges are not yet written correctly, hence marked as XFAIL.
  • Property mode set to 100644
File size: 4.9 KB
Line 
1# PLEASE adhere to the alphabetical ordering in this Makefile!
2# Also indentation by a single tab
3
4
5PARSERSOURCE = \
6 Parser/ChangeTracker.cpp \
7 Parser/ConfigFileBuffer.cpp \
8 Parser/FormatParser_common.cpp \
9 Parser/FormatParser_Parameters.cpp \
10 Parser/FormatParserStorage.cpp \
11 Parser/MpqcParser.cpp \
12 Parser/MpqcParser_Parameters.cpp \
13 Parser/MpqcParser_Parameters_initBasis.cpp \
14 Parser/ParserTypes.cpp \
15 Parser/PcpParser.cpp \
16 Parser/PcpParser_helper.cpp \
17 Parser/PdbAtomInfoContainer.cpp \
18 Parser/PdbParser.cpp \
19 Parser/Psi3Parser.cpp \
20 Parser/Psi3Parser_Parameters.cpp \
21 Parser/TremoloParser.cpp \
22 Parser/TremoloParser_ElementKeys.cpp \
23 Parser/TremoloAtomInfoContainer.cpp \
24 Parser/XmlParser.cpp \
25 Parser/XyzParser.cpp
26
27PARSERHEADER = \
28 Parser/ChangeTracker.hpp \
29 Parser/ConfigFileBuffer.hpp \
30 Parser/Exceptions.hpp \
31 Parser/FormatParser.hpp \
32 Parser/FormatParser_specializations_header.hpp \
33 Parser/FormatParser_common.hpp \
34 Parser/FormatParserInterface.hpp \
35 Parser/FormatParserTrait.hpp \
36 Parser/FormatParserTrait_specializations_header.hpp \
37 Parser/FormatParser_Parameters.hpp \
38 Parser/FormatParserStorage.hpp \
39 Parser/MpqcParser.hpp \
40 Parser/MpqcParser_Parameters.hpp \
41 Parser/ParserTypes.hpp \
42 Parser/ParserTypes.def \
43 Parser/ParserTypes.undef \
44 Parser/PcpParser.hpp \
45 Parser/PcpParser_helper.hpp \
46 Parser/PdbAtomInfoContainer.hpp \
47 Parser/PdbKey.hpp \
48 Parser/PdbParser.hpp \
49 Parser/Psi3Parser.hpp \
50 Parser/Psi3Parser_Parameters.hpp \
51 Parser/TremoloKey.hpp \
52 Parser/TremoloParser.hpp \
53 Parser/TremoloParser_ElementKeys.hpp \
54 Parser/TremoloAtomInfoContainer.hpp \
55 Parser/XmlParser.hpp \
56 Parser/XyzParser.hpp
57
58PARSERPARAMETERSSOURCE = \
59 Parser/Parameters/ParameterStorage.cpp \
60 Parser/Parameters/StringParameter.cpp
61
62PARSERPARAMETERSHEADER = \
63 Parser/Parameters/ParameterStorage.hpp \
64 Parser/Parameters/ContinuousParameter.hpp \
65 Parser/Parameters/ContinuousParameter_impl.hpp \
66 Parser/Parameters/ContinuousValue.hpp \
67 Parser/Parameters/ContinuousValue_impl.hpp \
68 Parser/Parameters/DiscreteParameter.hpp \
69 Parser/Parameters/DiscreteParameter_impl.hpp \
70 Parser/Parameters/DiscreteValue.hpp \
71 Parser/Parameters/DiscreteValue_impl.hpp \
72 Parser/Parameters/Parameter.hpp \
73 Parser/Parameters/StringParameter.hpp \
74 Parser/Parameters/ValueInterface.hpp
75
76PUGIXMLSOURCE = \
77 Parser/pugixml/pugixml.cpp
78
79PUGIXMLHEADER = \
80 Parser/pugixml/pugixml.hpp \
81 Parser/pugixml/pugiconfig.hpp
82
83noinst_LTLIBRARIES += libMolecuilderParser.la
84libMolecuilderParser_la_includedir = $(includedir)/MoleCuilder/Parser/
85
86nobase_libMolecuilderParser_la_include_HEADERS = ${PARSERHEADER} ${PARSERPARAMETERSHEADER} $(PUGIXMLHEADER)
87
88## Define the source file list for the "libexample-@MOLECUILDER_API_VERSION@.la"
89## target. Note that @MOLECUILDER_API_VERSION@ is not interpreted by Automake and
90## will therefore be treated as if it were literally part of the target name,
91## and the variable name derived from that.
92## The file extension .cc is recognized by Automake, and makes it produce
93## rules which invoke the C++ compiler to produce a libtool object file (.lo)
94## from each source file. Note that it is not necessary to list header files
95## which are already listed elsewhere in a _HEADERS variable assignment.
96libMolecuilderParser_la_SOURCES = ${PARSERSOURCE} ${PARSERPARAMETERSSOURCE} $(PUGIXMLSOURCE)
97
98## Instruct libtool to include ABI version information in the generated shared
99## library file (.so). The library ABI version is defined in configure.ac, so
100## that all version information is kept in one place.
101#libMolecuilderParser_la_LDFLAGS = -version-info $(MOLECUILDER_SO_VERSION)
102
103## The generated configuration header is installed in its own subdirectory of
104## $(libdir). The reason for this is that the configuration information put
105## into this header file describes the target platform the installed library
106## has been built for. Thus the file must not be installed into a location
107## intended for architecture-independent files, as defined by the Filesystem
108## Hierarchy Standard (FHS).
109## The nodist_ prefix instructs Automake to not generate rules for including
110## the listed files in the distribution on 'make dist'. Files that are listed
111## in _HEADERS variables are normally included in the distribution, but the
112## configuration header file is generated at configure time and should not be
113## shipped with the source tarball.
114#libMolecuilderParser_libincludedir = $(libdir)/MoleCuilder/include
115#nodist_libMolecuilderParser_libinclude_HEADERS = $(top_builddir)/libmolecuilder_config.h
116
117## Install the generated pkg-config file (.pc) into the expected location for
118## architecture-dependent package configuration information. Occasionally,
119## pkg-config files are also used for architecture-independent data packages,
120## in which case the correct install location would be $(datadir)/pkgconfig.
121#pkgconfigdir = $(libdir)/pkgconfig
122#pkgconfig_DATA = $(top_builddir)/MoleCuilder.pc
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