1 | /*
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2 | * Project: MoleCuilder
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3 | * Description: creates and alters molecular systems
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4 | * Copyright (C) 2010-2012 University of Bonn. All rights reserved.
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5 | *
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6 | *
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7 | * This file is part of MoleCuilder.
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8 | *
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9 | * MoleCuilder is free software: you can redistribute it and/or modify
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10 | * it under the terms of the GNU General Public License as published by
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11 | * the Free Software Foundation, either version 2 of the License, or
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12 | * (at your option) any later version.
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13 | *
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14 | * MoleCuilder is distributed in the hope that it will be useful,
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15 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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16 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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17 | * GNU General Public License for more details.
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18 | *
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19 | * You should have received a copy of the GNU General Public License
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20 | * along with MoleCuilder. If not, see <http://www.gnu.org/licenses/>.
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21 | */
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22 |
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23 | /*
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24 | * FormatParser_Parameters.cpp
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25 | *
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26 | * Created on: Sep 30, 2011
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27 | * Author: heber
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28 | */
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29 |
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30 | // include config.h
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31 | #ifdef HAVE_CONFIG_H
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32 | #include <config.h>
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33 | #endif
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34 |
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35 | #include "CodePatterns/MemDebug.hpp"
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36 |
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37 | #include <iostream>
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38 | #include <boost/algorithm/string.hpp>
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39 | #include <boost/tokenizer.hpp>
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40 | #include <sstream>
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41 | #include <string>
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42 |
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43 | #include "CodePatterns/Assert.hpp"
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44 | #include "CodePatterns/Log.hpp"
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45 |
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46 | #include "Parameters/ParameterAsString.hpp"
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47 | #include "FormatParser_Parameters.hpp"
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48 |
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49 | /** Constructor of class FormatParser_Parameters.
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50 | *
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51 | * \note we make sure that storage is always present
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52 | *
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53 | */
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54 | FormatParser_Parameters::FormatParser_Parameters() :
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55 | storage(new ParameterStorage)
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56 | {}
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57 |
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58 | /** Copy constructor of class FormatParser_Parameters.
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59 | *
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60 | * @param _parameters instance to copy from
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61 | */
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62 | FormatParser_Parameters::FormatParser_Parameters(const FormatParser_Parameters &_parameters) :
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63 | storage(new ParameterStorage(*_parameters.storage))
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64 | {}
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65 |
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66 |
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67 | /** Destructor of class FormatParser_Parameters.
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68 | *
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69 | */
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70 | FormatParser_Parameters::~FormatParser_Parameters()
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71 | {
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72 | delete storage;
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73 | }
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74 |
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75 | /** Implements the Parameter::clone() function.
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76 | *
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77 | * @return another instance with an identical copy of each parameter in \a storage
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78 | */
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79 | FormatParser_Parameters* FormatParser_Parameters::clone() const
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80 | {
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81 | return (new FormatParser_Parameters(*this));
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82 | }
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83 |
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84 | /** This makes this instance a clone of \a _instance.
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85 | *
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86 | * \note This is basically the other way round to clone().
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87 | *
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88 | * @param _instance instance to clone from
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89 | */
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90 | void FormatParser_Parameters::makeClone(const FormatParser_Parameters &_instance)
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91 | {
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92 | // we simply remove storage
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93 | delete storage;
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94 | // and clone the one from _instance
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95 | storage = new ParameterStorage(*_instance.storage);
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96 | }
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97 |
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98 | /** Adds a parameter to \a storage.
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99 | *
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100 | * This just eases use, saves some typing and is more clear as to what is done.
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101 | *
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102 | * @param instance parameter to add
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103 | */
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104 | void FormatParser_Parameters::appendParameter(ParameterAsString *instance)
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105 | {
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106 | storage->registerInstance(instance);
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107 | }
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108 |
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109 | /** Checks for presence of a parameter in \a storage.
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110 | *
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111 | * This just eases use, saves some typing and is more clear as to what is done.
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112 | *
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113 | * @return true - parameter by this \a _name is present in storage, false - else
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114 | */
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115 | bool FormatParser_Parameters::haveParameter(const std::string &_name) const
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116 | {
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117 | return storage->isPresentByName(_name);
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118 | }
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119 |
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120 | /** Gets a parameter from \a storage.
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121 | *
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122 | * This just eases use, saves some typing and is more clear as to what is done.
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123 | *
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124 | * @return pointer to instance with this \a _name
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125 | */
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126 | ParameterAsString *FormatParser_Parameters::getParameter(const std::string &_name) const
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127 | {
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128 | return storage->getByName(_name);
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129 | }
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130 |
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131 | /** Output operator for the contents of FormatParser_Parameters::params.
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132 | *
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133 | * @param ost output stream
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134 | * @param params reference to FormatParser_Parameters containing params.
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135 | * @return reference to output stream for concatenation
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136 | */
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137 | std::ostream & operator << (std::ostream& ost, const FormatParser_Parameters ¶ms)
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138 | {
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139 | // this is ugly, but with boost::any to safeguard const-ness is plain impossible
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140 | std::ostringstream output;
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141 | ASSERT(params.storage != NULL,
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142 | "operator<<(FormatParser_Parameters) - storage is NULL.");
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143 | for (ParameterStorage::const_iterator iter = params.storage->getBeginIter();
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144 | iter != params.storage->getEndIter();
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145 | ++iter)
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146 | if (!iter->second->getAsString().empty())
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147 | output << iter->first << "=" << iter->second->getAsString() << ";";
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148 | ost << output.str();
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149 | return ost;
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150 | }
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151 |
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152 | /** Input operator for a list of parameters to place into \a params.
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153 | *
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154 | * @param ist input stream
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155 | * @param params parameters to parse into
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156 | * @return input stream for concatenation
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157 | */
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158 | std::istream & operator >> (std::istream& ist, FormatParser_Parameters ¶ms)
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159 | {
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160 | typedef boost::tokenizer<boost::char_separator<char> >
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161 | tokenizer;
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162 | boost::char_separator<char> semicolonsep(";");
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163 | boost::char_separator<char> equalitysep("=");
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164 | boost::char_separator<char> ticksep("\"");
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165 | std::string line;
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166 | std::getline( ist, line );
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167 | //LOG(0, "INFO: full line of parameters is '" << line << "'");
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168 | tokenizer tokens(line, semicolonsep);
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169 | ASSERT(tokens.begin() != tokens.end(),
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170 | "operator<< on FormatParser_Parameters - empty string, need at least ';' in line "+line+"!");
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171 | for (tokenizer::iterator tok_iter = tokens.begin();
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172 | tok_iter != tokens.end(); ++tok_iter) {
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173 | //LOG(2, "INFO: (key,value) pair is: " << *tok_iter << ".");
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174 | tokenizer paramtokens(*tok_iter, equalitysep);
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175 | if (paramtokens.begin() != paramtokens.end()) {
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176 | tokenizer::iterator tok_paramiter = paramtokens.begin();
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177 | ASSERT(tok_paramiter != paramtokens.end(),
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178 | "operator<< on FormatParser_Parameters - missing value before ' =' in token "+*tok_iter+"!");
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179 | tokenizer::iterator tok_valueiter = tok_paramiter;
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180 | tokenizer::iterator tok_checkiter = ++tok_valueiter;
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181 | ASSERT(tok_valueiter != paramtokens.end(),
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182 | "operator<< on FormatParser_Parameters - missing value after ' =' in token "+*tok_iter+"!");
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183 | ++tok_checkiter;
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184 | ASSERT(tok_checkiter == paramtokens.end(),
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185 | "operator<< on FormatParser_Parameters - still more tokens after ' =' in token "+*tok_iter+":"
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186 | +*tok_checkiter+"!");
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187 | LOG(3, "INFO: key is '" << *tok_paramiter << "', value is '" << *tok_valueiter << "'.");
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188 | // TODO: throw exception instead of ASSERT
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189 | std::string key(*tok_paramiter);
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190 | std::string value(*tok_valueiter);
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191 | boost::trim(key);
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192 | boost::trim(value);
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193 | tokenizer ticklesstokens(value, ticksep);
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194 | ASSERT(ticklesstokens.begin() != ticklesstokens.end(),
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195 | "operator<< on FormatParser_Parameters - no tokens present after removing ticks in token "+*tok_valueiter+"!");
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196 | std::stringstream valuestream(*(ticklesstokens.begin()));
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197 | //LOG(2, "INFO: Token pair is " << key << "," << valuestream.str());
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198 |
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199 | // TODO: throw exception instead of DoeLog()
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200 | ASSERT(params.haveParameter(key),
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201 | "operator >> on FormatParser_Parameters - unknown parameter name '"
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202 | +key+"' with value "+valuestream.str()+"!");
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203 | if (params.haveParameter(key)) {
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204 | ParameterAsString *instance = params.getParameter(key);
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205 | instance->setAsString(valuestream.str());
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206 | }
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207 | } else {
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208 | ist.setstate(std::ios::eofbit);
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209 | }
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210 | }
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211 | return ist;
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212 | }
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