| 1 | /*
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| 2 |  * Project: MoleCuilder
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| 3 |  * Description: creates and alters molecular systems
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| 4 |  * Copyright (C)  2010-2012 University of Bonn. All rights reserved.
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| 5 |  * 
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| 6 |  *
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| 7 |  *   This file is part of MoleCuilder.
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| 8 |  *
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| 9 |  *    MoleCuilder is free software: you can redistribute it and/or modify
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| 10 |  *    it under the terms of the GNU General Public License as published by
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| 11 |  *    the Free Software Foundation, either version 2 of the License, or
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| 12 |  *    (at your option) any later version.
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| 13 |  *
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| 14 |  *    MoleCuilder is distributed in the hope that it will be useful,
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| 15 |  *    but WITHOUT ANY WARRANTY; without even the implied warranty of
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| 16 |  *    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
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| 17 |  *    GNU General Public License for more details.
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| 18 |  *
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| 19 |  *    You should have received a copy of the GNU General Public License
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| 20 |  *    along with MoleCuilder.  If not, see <http://www.gnu.org/licenses/>.
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| 21 |  */
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| 22 | 
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| 23 | /*
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| 24 |  * FormatParser_Parameters.cpp
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| 25 |  *
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| 26 |  *  Created on: Sep 30, 2011
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| 27 |  *      Author: heber
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| 28 |  */
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| 29 | 
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| 30 | // include config.h
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| 31 | #ifdef HAVE_CONFIG_H
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| 32 | #include <config.h>
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| 33 | #endif
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| 34 | 
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| 35 | #include "CodePatterns/MemDebug.hpp"
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| 36 | 
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| 37 | #include <iostream>
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| 38 | #include <boost/algorithm/string.hpp>
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| 39 | #include <boost/tokenizer.hpp>
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| 40 | #include <sstream>
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| 41 | #include <string>
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| 42 | 
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| 43 | #include "CodePatterns/Assert.hpp"
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| 44 | #include "CodePatterns/Log.hpp"
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| 45 | 
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| 46 | #include "Parameters/ParameterAsString.hpp"
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| 47 | #include "FormatParser_Parameters.hpp"
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| 48 | 
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| 49 | /** Constructor of class FormatParser_Parameters.
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| 50 |  *
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| 51 |  * \note we make sure that storage is always present
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| 52 |  *
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| 53 |  */
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| 54 | FormatParser_Parameters::FormatParser_Parameters() :
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| 55 |   storage(new ParameterStorage)
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| 56 | {}
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| 57 | 
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| 58 | /** Copy constructor of class FormatParser_Parameters.
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| 59 |  *
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| 60 |  * @param _parameters instance to copy from
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| 61 |  */
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| 62 | FormatParser_Parameters::FormatParser_Parameters(const FormatParser_Parameters &_parameters) :
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| 63 |   storage(new ParameterStorage(*_parameters.storage))
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| 64 | {}
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| 65 | 
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| 66 | 
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| 67 | /** Destructor of class FormatParser_Parameters.
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| 68 |  *
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| 69 |  */
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| 70 | FormatParser_Parameters::~FormatParser_Parameters()
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| 71 | {
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| 72 |   delete storage;
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| 73 | }
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| 74 | 
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| 75 | /** Implements the Parameter::clone() function.
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| 76 |  *
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| 77 |  * @return another instance with an identical copy of each parameter in \a storage
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| 78 |  */
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| 79 | FormatParser_Parameters* FormatParser_Parameters::clone() const
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| 80 | {
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| 81 |   return (new FormatParser_Parameters(*this));
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| 82 | }
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| 83 | 
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| 84 | /** This makes this instance a clone of \a _instance.
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| 85 |  *
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| 86 |  * \note This is basically the other way round to clone().
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| 87 |  *
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| 88 |  * @param _instance instance to clone from
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| 89 |  */
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| 90 | void FormatParser_Parameters::makeClone(const FormatParser_Parameters &_instance)
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| 91 | {
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| 92 |   // we simply remove storage
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| 93 |   delete storage;
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| 94 |   // and clone the one from _instance
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| 95 |   storage = new ParameterStorage(*_instance.storage);
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| 96 | }
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| 97 | 
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| 98 | /** Adds a parameter to \a storage.
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| 99 |  *
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| 100 |  * This just eases use, saves some typing and is more clear as to what is done.
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| 101 |  *
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| 102 |  * @param instance parameter to add
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| 103 |  */
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| 104 | void FormatParser_Parameters::appendParameter(ParameterAsString *instance)
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| 105 | {
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| 106 |   storage->registerInstance(instance);
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| 107 | }
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| 108 | 
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| 109 | /** Checks for presence of a parameter in \a storage.
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| 110 |  *
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| 111 |  * This just eases use, saves some typing and is more clear as to what is done.
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| 112 |  *
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| 113 |  * @return true - parameter by this \a _name is present in storage, false - else
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| 114 |  */
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| 115 | bool FormatParser_Parameters::haveParameter(const std::string &_name) const
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| 116 | {
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| 117 |   return storage->isPresentByName(_name);
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| 118 | }
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| 119 | 
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| 120 | /** Gets a parameter from \a storage.
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| 121 |  *
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| 122 |  * This just eases use, saves some typing and is more clear as to what is done.
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| 123 |  *
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| 124 |  * @return pointer to instance with this \a _name
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| 125 |  */
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| 126 | ParameterAsString *FormatParser_Parameters::getParameter(const std::string &_name) const
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| 127 | {
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| 128 |   return storage->getByName(_name);
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| 129 | }
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| 130 | 
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| 131 | /** Output operator for the contents of FormatParser_Parameters::params.
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| 132 |  *
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| 133 |  * @param ost output stream
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| 134 |  * @param params reference to FormatParser_Parameters containing params.
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| 135 |  * @return reference to output stream for concatenation
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| 136 |  */
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| 137 | std::ostream & operator << (std::ostream& ost, const FormatParser_Parameters ¶ms)
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| 138 | {
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| 139 |   // this is ugly, but with boost::any to safeguard const-ness is plain impossible
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| 140 |   std::ostringstream output;
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| 141 |   ASSERT(params.storage != NULL,
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| 142 |       "operator<<(FormatParser_Parameters) - storage is NULL.");
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| 143 |   for (ParameterStorage::const_iterator iter = params.storage->getBeginIter();
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| 144 |       iter != params.storage->getEndIter();
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| 145 |       ++iter)
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| 146 |     if (!iter->second->getAsString().empty())
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| 147 |       output << iter->first <<  "=" << iter->second->getAsString() << ";";
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| 148 |   ost << output.str();
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| 149 |   return ost;
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| 150 | }
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| 151 | 
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| 152 | /** Input operator for a list of parameters to place into \a params.
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| 153 |  *
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| 154 |  * @param ist input stream
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| 155 |  * @param params parameters to parse into
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| 156 |  * @return input stream for concatenation
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| 157 |  */
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| 158 | std::istream & operator >> (std::istream& ist, FormatParser_Parameters ¶ms)
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| 159 | {
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| 160 |   typedef boost::tokenizer<boost::char_separator<char> >
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| 161 |       tokenizer;
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| 162 |   boost::char_separator<char> semicolonsep(";");
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| 163 |   boost::char_separator<char> equalitysep("=");
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| 164 |   boost::char_separator<char> ticksep("\"");
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| 165 |   std::string line;
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| 166 |   std::getline( ist, line );
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| 167 |   //LOG(0, "INFO: full line of parameters is '" << line << "'");
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| 168 |   tokenizer tokens(line, semicolonsep);
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| 169 |   ASSERT(tokens.begin() != tokens.end(),
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| 170 |       "operator<< on FormatParser_Parameters - empty string, need at least ';' in line "+line+"!");
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| 171 |   for (tokenizer::iterator tok_iter = tokens.begin();
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| 172 |         tok_iter != tokens.end(); ++tok_iter) {
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| 173 |     //LOG(2, "INFO: (key,value) pair is: " << *tok_iter << ".");
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| 174 |     tokenizer paramtokens(*tok_iter, equalitysep);
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| 175 |     if (paramtokens.begin() != paramtokens.end()) {
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| 176 |       tokenizer::iterator tok_paramiter = paramtokens.begin();
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| 177 |       ASSERT(tok_paramiter != paramtokens.end(),
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| 178 |           "operator<< on FormatParser_Parameters - missing value before ' =' in token "+*tok_iter+"!");
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| 179 |       tokenizer::iterator tok_valueiter = tok_paramiter;
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| 180 |       tokenizer::iterator tok_checkiter = ++tok_valueiter;
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| 181 |       ASSERT(tok_valueiter != paramtokens.end(),
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| 182 |           "operator<< on FormatParser_Parameters - missing value after ' =' in token "+*tok_iter+"!");
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| 183 |       ++tok_checkiter;
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| 184 |       ASSERT(tok_checkiter == paramtokens.end(),
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| 185 |           "operator<< on FormatParser_Parameters - still more tokens after ' =' in token "+*tok_iter+":"
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| 186 |           +*tok_checkiter+"!");
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| 187 |       LOG(3, "INFO: key is '" << *tok_paramiter << "', value is '" << *tok_valueiter << "'.");
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| 188 |       // TODO: throw exception instead of ASSERT
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| 189 |       std::string key(*tok_paramiter);
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| 190 |       std::string value(*tok_valueiter);
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| 191 |       boost::trim(key);
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| 192 |       boost::trim(value);
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| 193 |       tokenizer ticklesstokens(value, ticksep);
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| 194 |       ASSERT(ticklesstokens.begin() != ticklesstokens.end(),
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| 195 |           "operator<< on FormatParser_Parameters - no tokens present after removing ticks in token "+*tok_valueiter+"!");
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| 196 |       std::stringstream valuestream(*(ticklesstokens.begin()));
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| 197 |       //LOG(2, "INFO: Token pair is " << key << "," << valuestream.str());
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| 198 | 
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| 199 |       // TODO: throw exception instead of DoeLog()
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| 200 |       ASSERT(params.haveParameter(key),
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| 201 |           "operator >> on FormatParser_Parameters - unknown parameter name '"
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| 202 |           +key+"' with value "+valuestream.str()+"!");
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| 203 |       if (params.haveParameter(key)) {
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| 204 |         ParameterAsString *instance = params.getParameter(key);
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| 205 |         instance->setAsString(valuestream.str());
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| 206 |       }
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| 207 |     } else {
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| 208 |       ist.setstate(std::ios::eofbit);
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| 209 |     }
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| 210 |   }
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| 211 |   return ist;
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| 212 | }
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