1 | /*
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2 | * MatrixContent.hpp
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3 | *
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4 | * Created on: Jul 2, 2010
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5 | * Author: crueger
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6 | */
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7 |
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8 | #ifndef MATRIXCONTENT_HPP_
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9 | #define MATRIXCONTENT_HPP_
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10 |
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11 | /** MatrixContent is a wrapper for gsl_matrix.
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12 | *
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13 | * The GNU Scientific Library contaisn some very well written routines for
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14 | * linear algebra problems. However, it's syntax is C and hence it does not
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15 | * lend itself to readable written code, i.e. C = A * B, where A, B, and C
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16 | * are all matrices. Writing code this way is very convenient, concise and
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17 | * also in the same manner as one would type in MatLab.
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18 | * However, with C++ and its feature to overload functions and its operator
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19 | * functions such syntax is easy to create.
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20 | *
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21 | * Hence, this class is a C++ wrapper to gsl_matrix. There already some other
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22 | * libraries, however they fall short for the following reasons:
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23 | * -# gslwrap: not very well written and uses floats instead of doubles
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24 | * -# gslcpp: last change is from 2007 and only very few commits
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25 | * -# o2scl: basically, the same functionality as gsl only written in C++,
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26 | * however it uses GPLv3 license which is inconvenient for MoleCuilder.
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27 | *
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28 | * <h1>Howto use MatrixContent</h1>
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29 | *
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30 | * One should not use MatrixContent directly but either have it as a member
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31 | * variable in a specialized class or inherit from it.
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32 | *
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33 | */
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34 |
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35 | #include <gsl/gsl_matrix.h>
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36 |
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37 | #include <iosfwd>
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38 |
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39 | #include "LinearAlgebra/MatrixVector_ops.hpp"
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40 |
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41 | class VectorContent;
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42 |
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43 | /** Dummy structure to create a unique signature.
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44 | *
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45 | */
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46 | struct MatrixBaseCase{};
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47 |
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48 | class MatrixContent
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49 | {
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50 | friend std::ostream & operator<<(std::ostream &ost, const MatrixContent &mat);
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51 | friend class RealSpaceMatrix;
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52 | friend class LinearSystemOfEquations;
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53 |
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54 | // matrix vector products
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55 | friend VectorContent const operator*(const VectorContent& vec, const MatrixContent& mat);
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56 | friend VectorContent const operator*(const MatrixContent& mat, const VectorContent& vec);
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57 |
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58 | // unit tests
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59 | friend class MatrixContentTest;
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60 | friend class MatrixContentSymmetricTest;
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61 | public:
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62 | MatrixContent(size_t rows, size_t columns);
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63 | MatrixContent(size_t _rows, size_t _columns, MatrixBaseCase);
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64 | MatrixContent(size_t rows, size_t columns, const double *src);
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65 | MatrixContent(gsl_matrix *&src);
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66 | MatrixContent(const MatrixContent &src);
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67 | MatrixContent(const MatrixContent *src);
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68 | virtual ~MatrixContent();
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69 |
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70 | // Accessing
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71 | double &at(size_t i, size_t j);
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72 | const double at(size_t i, size_t j) const;
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73 | void set(size_t i, size_t j, const double value);
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74 |
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75 | // Initializing
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76 | void setFromDoubleArray(double * x);
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77 | void setIdentity();
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78 | void setValue(double _value);
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79 | void setZero();
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80 |
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81 | // Exchanging elements
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82 | bool SwapRows(size_t i, size_t j);
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83 | bool SwapColumns(size_t i, size_t j);
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84 | bool SwapRowColumn(size_t i, size_t j);
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85 |
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86 | // Transformations
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87 | MatrixContent transpose() const;
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88 | MatrixContent &transpose();
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89 | gsl_vector* transformToEigenbasis();
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90 | void sortEigenbasis(gsl_vector *eigenvalues);
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91 |
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92 | // Properties
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93 | bool IsNull() const;
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94 | bool IsPositive() const;
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95 | bool IsNegative() const;
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96 | bool IsNonNegative() const;
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97 | bool IsPositiveDefinite() const;
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98 | double Determinant() const;
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99 |
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100 | // Operators
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101 | MatrixContent &operator=(const MatrixContent &src);
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102 | const MatrixContent &operator+=(const MatrixContent &rhs);
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103 | const MatrixContent &operator-=(const MatrixContent &rhs);
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104 | const MatrixContent &operator*=(const MatrixContent &rhs);
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105 | const MatrixContent operator*(const MatrixContent &rhs) const;
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106 | const MatrixContent &operator&=(const MatrixContent &rhs);
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107 | const MatrixContent operator&(const MatrixContent &rhs) const;
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108 | const MatrixContent &operator*=(const double factor);
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109 | bool operator==(const MatrixContent &rhs) const;
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110 |
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111 | const size_t getRows() const;
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112 | const size_t getColumns() const;
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113 |
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114 | VectorContent *getColumnVector(size_t column) const;
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115 | VectorContent *getRowVector(size_t row) const;
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116 | VectorContent *getDiagonalVector() const;
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117 |
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118 | protected:
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119 | double *Pointer(size_t m, size_t n);
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120 | const double *const_Pointer(size_t m, size_t n) const;
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121 |
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122 | gsl_matrix * content;
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123 | const size_t rows; // store for internal purposes
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124 | const size_t columns; // store for internal purposes
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125 |
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126 | private:
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127 | };
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128 |
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129 | const MatrixContent operator*(const double factor,const MatrixContent& mat);
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130 | const MatrixContent operator*(const MatrixContent &mat,const double factor);
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131 | std::ostream & operator<<(std::ostream &ost, const MatrixContent &mat);
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132 |
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133 | /** Matrix view.
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134 | * Extension of MatrixContent to contain not a gsl_matrix but only a view on a
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135 | * gsl_matrix
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136 | *
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137 | * We need the above MatrixBaseCase here:
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138 | * content, i.e. the gsl_matrix, must not be allocated, as it is just a view
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139 | * with an internal gsl_matrix_view. Hence, MatrixBaseCase is just dummy class
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140 | * to give the constructor a unique signature.
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141 | */
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142 | struct MatrixViewContent : public MatrixContent
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143 | {
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144 | MatrixViewContent(gsl_matrix_view _view) :
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145 | MatrixContent(_view.matrix.size1, _view.matrix.size2, MatrixBaseCase()),
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146 | view(_view)
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147 | {
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148 | content = &view.matrix;
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149 | }
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150 | ~MatrixViewContent(){
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151 | content=0;
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152 | }
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153 | gsl_matrix_view view;
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154 | };
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155 |
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156 | #endif /* MATRIXCONTENT_HPP_ */
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