| 1 | /* | 
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| 2 | * MatrixContent.hpp | 
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| 3 | * | 
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| 4 | *  Created on: Jul 2, 2010 | 
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| 5 | *      Author: crueger | 
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| 6 | */ | 
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| 7 |  | 
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| 8 | #ifndef MATRIXCONTENT_HPP_ | 
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| 9 | #define MATRIXCONTENT_HPP_ | 
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| 10 |  | 
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| 11 | /** MatrixContent is a wrapper for gsl_matrix. | 
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| 12 | * | 
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| 13 | * The GNU Scientific Library contaisn some very well written routines for | 
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| 14 | * linear algebra problems. However, it's syntax is C and hence it does not | 
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| 15 | * lend itself to readable written code, i.e. C = A * B, where A, B, and C | 
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| 16 | * are all matrices. Writing code this way is very convenient, concise and | 
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| 17 | * also in the same manner as one would type in MatLab. | 
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| 18 | * However, with C++ and its feature to overload functions and its operator | 
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| 19 | * functions such syntax is easy to create. | 
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| 20 | * | 
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| 21 | * Hence, this class is a C++ wrapper to gsl_matrix. There already some other | 
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| 22 | * libraries, however they fall short for the following reasons: | 
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| 23 | * -# gslwrap: not very well written and uses floats instead of doubles | 
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| 24 | * -# gslcpp: last change is from 2007 and only very few commits | 
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| 25 | * -# o2scl: basically, the same functionality as gsl only written in C++, | 
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| 26 | *    however it uses GPLv3 license which is inconvenient for MoleCuilder. | 
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| 27 | * | 
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| 28 | * <h1>Howto use MatrixContent</h1> | 
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| 29 | * | 
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| 30 | * One should not use MatrixContent directly but either have it as a member | 
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| 31 | * variable in a specialized class or inherit from it. | 
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| 32 | * | 
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| 33 | */ | 
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| 34 |  | 
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| 35 | #include <gsl/gsl_matrix.h> | 
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| 36 |  | 
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| 37 | #include <iosfwd> | 
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| 38 |  | 
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| 39 | #include "LinearAlgebra/MatrixVector_ops.hpp" | 
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| 40 |  | 
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| 41 | class VectorContent; | 
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| 42 |  | 
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| 43 | /** Dummy structure to create a unique signature. | 
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| 44 | * | 
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| 45 | */ | 
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| 46 | struct MatrixBaseCase{}; | 
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| 47 |  | 
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| 48 | class MatrixContent | 
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| 49 | { | 
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| 50 | friend std::ostream & operator<<(std::ostream &ost, const MatrixContent &mat); | 
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| 51 | friend class RealSpaceMatrix; | 
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| 52 | friend class LinearSystemOfEquations; | 
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| 53 |  | 
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| 54 | // matrix vector products | 
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| 55 | friend VectorContent const operator*(const VectorContent& vec, const MatrixContent& mat); | 
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| 56 | friend VectorContent const operator*(const MatrixContent& mat, const VectorContent& vec); | 
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| 57 |  | 
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| 58 | // unit tests | 
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| 59 | friend class MatrixContentTest; | 
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| 60 | friend class MatrixContentSymmetricTest; | 
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| 61 | public: | 
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| 62 | MatrixContent(size_t rows, size_t columns); | 
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| 63 | MatrixContent(size_t _rows, size_t _columns, MatrixBaseCase); | 
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| 64 | MatrixContent(size_t rows, size_t columns, const double *src); | 
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| 65 | MatrixContent(gsl_matrix *&src); | 
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| 66 | MatrixContent(const MatrixContent &src); | 
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| 67 | MatrixContent(const MatrixContent *src); | 
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| 68 | virtual ~MatrixContent(); | 
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| 69 |  | 
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| 70 | // Accessing | 
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| 71 | double &at(size_t i, size_t j); | 
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| 72 | const double at(size_t i, size_t j) const; | 
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| 73 | void set(size_t i, size_t j, const double value); | 
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| 74 |  | 
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| 75 | // Initializing | 
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| 76 | void setFromDoubleArray(double * x); | 
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| 77 | void setIdentity(); | 
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| 78 | void setValue(double _value); | 
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| 79 | void setZero(); | 
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| 80 |  | 
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| 81 | // Exchanging elements | 
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| 82 | bool SwapRows(size_t i, size_t j); | 
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| 83 | bool SwapColumns(size_t i, size_t j); | 
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| 84 | bool SwapRowColumn(size_t i, size_t j); | 
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| 85 |  | 
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| 86 | // Transformations | 
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| 87 | MatrixContent transpose() const; | 
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| 88 | MatrixContent &transpose(); | 
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| 89 | gsl_vector* transformToEigenbasis(); | 
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| 90 | void sortEigenbasis(gsl_vector *eigenvalues); | 
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| 91 |  | 
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| 92 | // Properties | 
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| 93 | bool IsNull() const; | 
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| 94 | bool IsPositive() const; | 
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| 95 | bool IsNegative() const; | 
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| 96 | bool IsNonNegative() const; | 
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| 97 | bool IsPositiveDefinite() const; | 
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| 98 | double Determinant() const; | 
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| 99 |  | 
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| 100 | // Operators | 
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| 101 | MatrixContent &operator=(const MatrixContent &src); | 
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| 102 | const MatrixContent &operator+=(const MatrixContent &rhs); | 
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| 103 | const MatrixContent &operator-=(const MatrixContent &rhs); | 
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| 104 | const MatrixContent &operator*=(const MatrixContent &rhs); | 
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| 105 | const MatrixContent operator*(const MatrixContent &rhs) const; | 
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| 106 | const MatrixContent &operator&=(const MatrixContent &rhs); | 
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| 107 | const MatrixContent operator&(const MatrixContent &rhs) const; | 
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| 108 | const MatrixContent &operator*=(const double factor); | 
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| 109 | bool operator==(const MatrixContent &rhs) const; | 
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| 110 |  | 
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| 111 | const size_t getRows() const; | 
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| 112 | const size_t getColumns() const; | 
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| 113 |  | 
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| 114 | VectorContent *getColumnVector(size_t column) const; | 
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| 115 | VectorContent *getRowVector(size_t row) const; | 
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| 116 | VectorContent *getDiagonalVector() const; | 
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| 117 |  | 
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| 118 | protected: | 
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| 119 | double *Pointer(size_t m, size_t n); | 
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| 120 | const double *const_Pointer(size_t m, size_t n) const; | 
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| 121 |  | 
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| 122 | gsl_matrix * content; | 
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| 123 | const size_t rows;      // store for internal purposes | 
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| 124 | const size_t columns;  // store for internal purposes | 
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| 125 |  | 
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| 126 | private: | 
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| 127 | }; | 
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| 128 |  | 
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| 129 | const MatrixContent operator*(const double factor,const MatrixContent& mat); | 
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| 130 | const MatrixContent operator*(const MatrixContent &mat,const double factor); | 
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| 131 | std::ostream & operator<<(std::ostream &ost, const MatrixContent &mat); | 
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| 132 |  | 
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| 133 | /** Matrix view. | 
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| 134 | * Extension of MatrixContent to contain not a gsl_matrix but only a view on a | 
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| 135 | * gsl_matrix | 
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| 136 | * | 
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| 137 | * We need the above MatrixBaseCase here: | 
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| 138 | * content, i.e. the gsl_matrix, must not be allocated, as it is just a view | 
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| 139 | * with an internal gsl_matrix_view. Hence, MatrixBaseCase is just dummy class | 
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| 140 | * to give the constructor a unique signature. | 
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| 141 | */ | 
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| 142 | struct MatrixViewContent : public MatrixContent | 
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| 143 | { | 
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| 144 | MatrixViewContent(gsl_matrix_view _view) : | 
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| 145 | MatrixContent(_view.matrix.size1, _view.matrix.size2, MatrixBaseCase()), | 
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| 146 | view(_view) | 
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| 147 | { | 
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| 148 | content = &view.matrix; | 
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| 149 | } | 
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| 150 | ~MatrixViewContent(){ | 
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| 151 | content=0; | 
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| 152 | } | 
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| 153 | gsl_matrix_view view; | 
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| 154 | }; | 
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| 155 |  | 
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| 156 | #endif /* MATRIXCONTENT_HPP_ */ | 
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