stable
        v1.7.0
      
      
        
          | Last change
 on this file since 13e5be was             5a479d, checked in by Frederik Heber <frederik.heber@…>, 22 months ago | 
        
          | 
Added python actions to generate all graph6 strings.
 graph6 strings don't take permutations in the adjacency matrix
into account. Hence, we are going through every permutation of
non-hydrogens and generate the respective graph6 string.
 | 
        
          | 
              
Property                 mode
 set to                 100644 | 
        
          | File size:
            1.1 KB | 
      
      
| Rev | Line |  | 
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| [5061d9] | 1 | /* | 
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|  | 2 | * Graph6Writer.hpp | 
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|  | 3 | * | 
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|  | 4 | *  Created on: Apr 2, 2021 | 
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|  | 5 | *      Author: heber | 
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|  | 6 | */ | 
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|  | 7 |  | 
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|  | 8 |  | 
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|  | 9 | #ifndef GRAPH_GRAPH6WRITER_HPP_ | 
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|  | 10 | #define GRAPH_GRAPH6WRITER_HPP_ | 
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|  | 11 |  | 
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|  | 12 | // include config.h | 
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|  | 13 | #ifdef HAVE_CONFIG_H | 
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|  | 14 | #include <config.h> | 
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|  | 15 | #endif | 
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|  | 16 |  | 
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|  | 17 | #include <iosfwd> | 
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|  | 18 | #include <vector> | 
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|  | 19 |  | 
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| [1c0b0b] | 20 | #include "types.hpp" | 
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|  | 21 |  | 
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| [5061d9] | 22 | class atom; | 
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|  | 23 |  | 
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|  | 24 | /** This functor prints a set of atoms as a graph6 formatted strings and returns | 
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|  | 25 | * all elements as a vector in the same order as the nodes in the graph6 | 
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|  | 26 | * representation. | 
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|  | 27 | * | 
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|  | 28 | * This is inspired by https://github.com/adrianN/graph6/, only I found the code | 
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|  | 29 | * there quite ugly and unnecessarily complicated: inheriting from std::iterator, | 
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|  | 30 | * overriding all the operators (++, *, ...) for no apparent reason instead of | 
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|  | 31 | * adding normal functions, ... | 
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|  | 32 | * | 
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|  | 33 | */ | 
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|  | 34 | struct Graph6Writer | 
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|  | 35 | { | 
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|  | 36 | const std::vector<const atom *> _atoms; | 
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|  | 37 |  | 
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|  | 38 | Graph6Writer(const std::vector<const atom *> atoms); | 
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|  | 39 |  | 
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|  | 40 | void write_n(std::ostream& out); | 
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|  | 41 |  | 
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|  | 42 | void write_graph6(std::ostream& out); | 
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|  | 43 |  | 
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|  | 44 | void write_elementlist(std::ostream& out); | 
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| [1c0b0b] | 45 |  | 
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| [5a479d] | 46 | void write_simple_elementlist(std::ostream& out); | 
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|  | 47 |  | 
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| [1c0b0b] | 48 | private: | 
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|  | 49 | atomId_t getBoundaryNonHydrogen() const; | 
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| [5061d9] | 50 | }; | 
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|  | 51 |  | 
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|  | 52 |  | 
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|  | 53 | #endif /* GRAPH_GRAPH6WRITER_HPP_ */ | 
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