source: src/Fragmentation/Summation/SetValues/SamplingGrid.hpp@ 5b1e5e

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Last change on this file since 5b1e5e was 5b1e5e, checked in by Frederik Heber <heber@…>, 8 years ago

FIX: Replaced 3 by NDIM in SamplingGrid which avoids some confusion with numeric grid levels.

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1/*
2 * SamplingGrid.hpp
3 *
4 * Created on: 25.07.2012
5 * Author: heber
6 */
7
8#ifndef SAMPLINGGRID_HPP_
9#define SAMPLINGGRID_HPP_
10
11// include config.h
12#ifdef HAVE_CONFIG_H
13#include <config.h>
14#endif
15
16#include <boost/function.hpp>
17#include <iosfwd>
18#include <vector>
19
20#include "boost/serialization/export.hpp"
21#include "boost/serialization/vector.hpp"
22
23#include "LinearAlgebra/defs.hpp"
24
25#include "Fragmentation/Summation/SetValues/SamplingGridProperties.hpp"
26#include "Fragmentation/Summation/ZeroInstance.hpp"
27
28class MPQCData;
29class SamplingGridTest;
30
31/** This class stores a sample function on a three-dimensional grid.
32 *
33 * \note We do not use boost::multi_array because it is not trivial to serialize.
34 *
35 */
36class SamplingGrid : public SamplingGridProperties
37{
38 //!> grant unit test access to private parts
39 friend class SamplingGridTest;
40 //!> grant output operator access
41 friend std::ostream & operator<<(std::ostream &ost, const SamplingGrid& other);
42public:
43 //!> typedef for sampled values
44 typedef std::vector< double > sampledvalues_t;
45
46 /** Constructor for class SamplingGrid for full window.
47 *
48 * Here, the window of sampled values spans the given domain.
49 *
50 * \param _begin offset for grid per axis
51 * \param _end edge length of grid per axis
52 * \param _level number of grid points in \f$2^{\mathrm{level}}\f$
53 * \param _sampled_grid sample points
54 */
55 SamplingGrid(const double _begin[NDIM],
56 const double _end[NDIM],
57 const int _level,
58 const sampledvalues_t &_sampled_grid);
59
60 /** Constructor for class SamplingGrid for empty window.
61 *
62 * Here, the window is initially of size zero.
63 *
64 * \param _begin offset for grid per axis
65 * \param _end edge length of grid per axis
66 * \param _level number of grid points in \f$2^{\mathrm{level}}\f$
67 */
68 SamplingGrid(const double _begin[NDIM],
69 const double _end[NDIM],
70 const int _level);
71
72 /** Copy constructor for class SamplingGrid with full window from SamplingGridProperties.
73 *
74 * Here, the window is initially empty.
75 *
76 * \param _props properties to copy
77 */
78 SamplingGrid(const SamplingGridProperties &_props);
79
80 /** Copy constructor for class SamplingGrid with empty window from SamplingGridProperties.
81 *
82 * Here, the window must span the whole domain
83 *
84 * \param _props properties to copy
85 * \param _sampled_grid sample points
86 */
87 SamplingGrid(
88 const SamplingGridProperties &_props,
89 const sampledvalues_t &_sampled_grid);
90
91 /** Copy constructor for class SamplingGrid.
92 *
93 * The window of sampled values corresponds to the one on \a _grid.
94 *
95 * \param _grid grid to copy
96 */
97 SamplingGrid(const SamplingGrid &_grid);
98
99 /** default cstor.
100 */
101 SamplingGrid();
102
103 virtual ~SamplingGrid();
104
105 /** Checks whether another instance is consistent with this one.
106 *
107 * \note Conistency is stronger as grids must have the same window.
108 *
109 * \param _props other properties to check against
110 * \return true - are consistent, false - else
111 */
112 bool isCongruent(const SamplingGrid &_props) const;
113
114 /** Assignment operator.
115 *
116 * \param other other instance to assign ourselves to
117 */
118 SamplingGrid& operator=(const SamplingGrid& other);
119
120 /** Addition operator with another SamplingGrid instance \a other.
121 *
122 * \param other other instance to sum onto this one.
123 * \return ref to this instance
124 */
125 SamplingGrid& operator+=(const SamplingGrid& other)
126 {
127 superposeOtherGrids(other, +1.);
128 return *this;
129 }
130
131 /** Element-wise multiplication operator with another SamplingGrid instance \a other.
132 *
133 * With non-zero windows we have to pay some more attention here.
134 * Now, the windows may not be congruent but we have to find the intersection
135 * of the two windows and then construct the new window only of this size and
136 * multiply. The trick then is not to copy&change the other grid but to
137 * access it properly.
138 *
139 * \param other other instance to sum onto this one.
140 * \return ref to this instance
141 */
142 SamplingGrid& operator*=(const SamplingGrid& other);
143
144 /** Scaling values in SamplingGrid instance by \a _value.
145 *
146 * With non-zero windows we have to pay some more attention here.
147 * Now, the windows may not be congruent but we have to find the intersection
148 * of the two windows and then construct the new window only of this size and
149 * multiply. The trick then is not to copy&change the other grid but to
150 * access it properly.
151 *
152 * \param other other instance to sum onto this one.
153 * \return ref to this instance
154 */
155 SamplingGrid& operator*=(const double _value);
156
157 /** Subtraction operator with another SamplingGrid instance \a other.
158 *
159 * \param other other instance to subtract from this one.
160 * \return ref to this instance
161 */
162 SamplingGrid& operator-=(const SamplingGrid& other)
163 {
164 superposeOtherGrids(other, -1.);
165 return *this;
166 }
167
168 /** Returns the numeric integral over the grid.
169 *
170 * @return sum of grid values times volume element
171 */
172 double integral() const;
173
174 /** Returns the numeric integral over the grid where the grid is element-wise multiplied with \a weight.
175 *
176 * @param weight grid of weights
177 * @return sum of grid values weighted by respective element in weight times volume element
178 */
179 double integral(const SamplingGrid &weight) const;
180
181 /** Returns the total number of gridpoints of the discrete mesh covering the (window) volume.
182 *
183 * @return number of gridpoints sampled_values should have
184 */
185 const size_t getWindowGridPoints() const;
186
187 /** Returns the number of gridpoints of the discrete mesh for the current
188 * window size for given axis \axis.
189 *
190 * \param axis axis to calculate number of gridpoints for
191 * \return number of gridpoints along this axis
192 */
193 const size_t getWindowGridPointsPerAxis(const size_t axis) const;
194
195 /** Returns the length of the window for the given \a axis.
196 *
197 * \param axis axis for which to get step length
198 * \return window length for the given axis, i.e. end - begin
199 */
200 const double getWindowLengthPerAxis(const size_t axis) const;
201
202 /** Returns the volume of the domain covered by the current window.
203 *
204 * @return volume of window
205 */
206 const double getWindowVolume() const;
207
208 /** Sets the size of the window.
209 *
210 * \note also resets the sampled points so far.
211 *
212 * \param _begin_window start of new window
213 * \param _end_window end of window
214 */
215 void setWindow(const double _begin_window[NDIM], const double _end_window[NDIM]);
216
217 /** Helper function to convert begin_window and end_window that are w.r.t.
218 * to domain [begin:end] to indices that can be used when traversing the grid.
219 *
220 * \param larger_wbegin begin of domain
221 * \param larger_wend end of domain
222 * \param smaller_wbegin begin of window
223 * \param smaller_wend end of window
224 * \param pre_offset discrete length from 0 to start of window
225 * \param post_offset discrete length from end of window to end
226 * \param length discrete length of window
227 * \param total total number of points for checking, should be sum of other three
228 */
229 void getDiscreteWindowIndices(
230 const double *larger_wbegin,
231 const double *larger_wend,
232 const double *smaller_wbegin,
233 const double *smaller_wend,
234 size_t *pre_offset,
235 size_t *post_offset,
236 size_t *length,
237 size_t *total) const;
238
239 /** Equality operator.
240 *
241 * @param other other instance to check against
242 * @return true - both are equal, false - grids differ
243 */
244 bool operator==(const SamplingGrid& other) const;
245
246 bool operator!=(const SamplingGrid& other) const
247 {
248 return (!(*this == other));
249 }
250
251private:
252 /** Sets the size of the domain.
253 *
254 * \note also resets the sampled points so far and the window.
255 *
256 * \param _begin start of new window
257 * \param _end end of window
258 */
259 void setDomain(const double _begin[NDIM], const double _end[NDIM]);
260
261 /** Sets the size of the domain.
262 *
263 * \note this is just internally used for easing the array setting.
264 *
265 * \param _begin start of domain
266 * \param _end end of domain
267 */
268 void setDomainSize(const double _begin[NDIM], const double _end[NDIM]);
269
270 /** Extends the window while keeping the values.
271 *
272 * \param _begin_window new start of window
273 * \param _end_window new end of window
274 */
275 void extendWindow(const double _begin_window[NDIM], const double _end_window[NDIM]);
276
277 /** Shrinks the window while keeping the values.
278 *
279 * \param _begin_window new start of window
280 * \param _end_window new end of window
281 */
282 void shrinkWindow(const double _begin_window[NDIM], const double _end_window[NDIM]);
283
284 /** Adds another (smaller) window onto the one in this instance.
285 *
286 * \note We assume here that the given window fits on the this one.
287 *
288 * \param _begin_window start of other window
289 * \param _end_window end of other window
290 * \param _sampled_grid other set of sampled values
291 * @param prefactor +1. is then addition, -1. is subtraction.
292 */
293 void addOntoWindow(
294 const double _begin_window[NDIM],
295 const double _end_window[NDIM],
296 const sampledvalues_t &_sampled_grid,
297 const double prefactor);
298
299 /** Adds another (larger) window into the one in this instance.
300 *
301 * \note We assume here that the given window is larger than this one.
302 *
303 * \param _begin_window start of other window
304 * \param _end_window end of other window
305 * \param _sampled_grid other set of sampled values
306 * @param prefactor +1. is then addition, -1. is subtraction.
307 */
308 void addIntoWindow(
309 const double _begin_window[NDIM],
310 const double _end_window[NDIM],
311 const sampledvalues_t &_sampled_grid,
312 const double prefactor);
313
314 /** Enum to help in addWindowOntoWindow() decide which iterator needs to be
315 * advanced.
316 */
317 enum eLargerWindow {
318 destwindow,
319 sourcewindow
320 };
321
322 /** Helper function to copy one (larger) window into a (smaller) window.
323 *
324 * \note Why do we need the extra \a choice? We need to know which window
325 * tuples is associated with which sampled values that are constrained by
326 * one of them being constant, hence the source values
327 *
328 * \param larger_wbegin start of larger window
329 * \param larger_wend end of larger window
330 * \param smaller_wbegin start of smaller window
331 * \param smaller_wend end of smaller window
332 * \param dest_sampled_grid larger set of sampled values
333 * \param source_sampled_grid smaller set of sampled values
334 * \param op operation to perform with the two elements
335 * \param larger_window indicates which is the larger window
336 */
337 void addWindowOntoWindow(
338 const double larger_wbegin[NDIM],
339 const double larger_wend[NDIM],
340 const double smaller_wbegin[NDIM],
341 const double smaller_wend[NDIM],
342 sampledvalues_t &dest_sampled_grid,
343 const sampledvalues_t &source_sampled_grid,
344 boost::function<void (double &, const double &)> op,
345 enum eLargerWindow larger_window);
346
347 /** Helper function that contains all the logic of how to superpose two
348 * grids.
349 *
350 * Is called by SamplingGrid::operator+=() and SamplingGrid::operator-=()
351 *
352 * @param other other histogram
353 * @param prefactor +1. is then addition, -1. is subtraction.
354 */
355 void superposeOtherGrids(const SamplingGrid &other, const double prefactor);
356
357 /** Sets the size of the window.
358 *
359 * \note also resets the sampled points so far.
360 *
361 * \param _begin_window start of new window
362 * \param _end_window end of window
363 */
364 void setWindowSize(const double _begin_window[NDIM], const double _end_window[NDIM]);
365
366public:
367 /// We do not store the whole grid if many entries are actually zero
368 /// but only a window wherein the sampled function is non-zero.
369
370 //!> sample points of the window
371 sampledvalues_t sampled_grid;
372
373 //!> start of the window relative to SamplingGridProperties::begin and SamplingGridProperties::size
374 double begin_window[NDIM];
375 //!> end of the window relative to SamplingGridProperties::begin and SamplingGridProperties::size
376 double end_window[NDIM];
377
378private:
379 friend class MPQCData;
380
381 friend class boost::serialization::access;
382 // serialization
383 template <typename Archive>
384 void serialize(Archive& ar, const unsigned int version)
385 {
386 ar & boost::serialization::base_object<SamplingGridProperties>(*this);
387 ar & const_cast< sampledvalues_t &>(sampled_grid);
388 for(size_t i=0;i<NDIM;++i) {
389 ar & begin_window[i];
390 ar & end_window[i];
391 }
392 }
393
394 //!> static typedef to use in cstor when no initial values are given
395 static const double zeroOffset[NDIM];
396};
397
398/** Output operator for class SamplingGrid.
399 *
400 * \param ost output stream to print to
401 * \param other instance to print
402 * \return ref to stream for concatenation
403 */
404std::ostream & operator<<(std::ostream &ost, const SamplingGrid& other);
405
406template<> SamplingGrid ZeroInstance<SamplingGrid>();
407
408// we need to give this class a unique key for serialization
409// its is only serialized through its base class FragmentJob
410BOOST_CLASS_EXPORT_KEY(SamplingGrid)
411
412// define inline functions
413#include "SamplingGrid_inline.hpp"
414
415#endif /* SAMPLINGGRID_HPP_ */
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