1 | /*
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2 | * Project: MoleCuilder
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3 | * Description: creates and alters molecular systems
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4 | * Copyright (C) 2012 University of Bonn. All rights reserved.
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5 | * Copyright (C) 2013 Frederik Heber. All rights reserved.
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6 | *
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7 | *
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8 | * This file is part of MoleCuilder.
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9 | *
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10 | * MoleCuilder is free software: you can redistribute it and/or modify
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11 | * it under the terms of the GNU General Public License as published by
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12 | * the Free Software Foundation, either version 2 of the License, or
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13 | * (at your option) any later version.
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14 | *
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15 | * MoleCuilder is distributed in the hope that it will be useful,
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16 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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17 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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18 | * GNU General Public License for more details.
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19 | *
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20 | * You should have received a copy of the GNU General Public License
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21 | * along with MoleCuilder. If not, see <http://www.gnu.org/licenses/>.
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22 | */
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23 |
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24 | /*
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25 | * IndexedVectors.cpp
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26 | *
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27 | * Created on: 29.07.2012
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28 | * Author: heber
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29 | */
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30 |
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31 | // include config.h
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32 | #ifdef HAVE_CONFIG_H
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33 | #include <config.h>
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34 | #endif
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35 |
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36 | #include "CodePatterns/MemDebug.hpp"
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37 |
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38 | #include "Fragmentation/Summation/SetValues/IndexedVectors.hpp"
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39 |
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40 | #include <iostream>
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41 |
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42 | #include "CodePatterns/Assert.hpp"
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43 |
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44 | // static member variables
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45 | const size_t IndexedVectors::FixedSize = 3;
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46 | const IndexedVectors::vector_t IndexedVectors::nullvector( FixedSize, 0.);
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47 |
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48 | IndexedVectors::IndexedVectors(const indices_t &_indices, const vectors_t &_vectors)
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49 | {
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50 | ASSERT(_indices.size() == _vectors.size(),
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51 | "IndexedVectors::IndexedVectors() - vector of indices and vectors don't match in size.");
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52 | indices_t::const_iterator indexiter = _indices.begin();
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53 | vectors_t::const_iterator vectoriter = _vectors.begin();
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54 | for (; vectoriter != _vectors.end(); ++indexiter, ++vectoriter) {
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55 | ASSERT( vectoriter->size() == FixedSize,
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56 | "IndexedVectors::IndexedVectors() - vector to instance "
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57 | +toString(*indexiter)+" has size "
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58 | +toString(vectoriter->size())+" different to FixedSize "
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59 | +toString(FixedSize)+".");
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60 | if (*indexiter != (size_t)DropIndex) { // skip all force vectors associated to -1
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61 | #ifndef NDEBUG
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62 | std::pair<indexedvectors_t::iterator, bool> inserter =
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63 | #endif
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64 | vectors.insert( std::make_pair( *indexiter, *vectoriter) );
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65 | ASSERT( inserter.second,
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66 | "IndexedVectors::IndexedVectors() - index "
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67 | +toString(inserter.first->first)+" already present with vector "
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68 | +toString(inserter.first->second)+".");
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69 | }
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70 | }
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71 | }
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72 |
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73 | IndexedVectors& IndexedVectors::operator=(const IndexedVectors &other)
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74 | {
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75 | // check for self-assignment
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76 | if (this != &other) {
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77 | vectors.clear();
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78 | vectors = other.vectors;
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79 | }
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80 | return *this;
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81 | }
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82 |
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83 | void IndexedVectors::superposeOtherIndexedVectors(const IndexedVectors &other, const double prefactor)
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84 | {
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85 | for (indexedvectors_t::const_iterator otheriter = other.vectors.begin();
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86 | otheriter != other.vectors.end(); ++otheriter) {
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87 | indexedvectors_t::iterator iter = vectors.find(otheriter->first);
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88 | if (iter == vectors.end()) {
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89 | // index does not exist
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90 | std::pair<indexedvectors_t::iterator, bool> inserter =
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91 | vectors.insert( std::make_pair( otheriter->first, nullvector) );
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92 | ASSERT( inserter.second,
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93 | "IndexedVectors::superposeOtherIndexedVectors() - index is present though unfound before?");
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94 | iter = inserter.first;
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95 | }
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96 | // now simply vector to index from other instance add with prefactor
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97 | vector_t::iterator vectoriter = iter->second.begin();
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98 | vector_t::const_iterator othervectoriter = otheriter->second.begin();
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99 | for (;vectoriter != iter->second.end(); ++vectoriter, ++othervectoriter) {
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100 | *vectoriter += prefactor * (*othervectoriter);
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101 | }
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102 | }
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103 | }
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104 |
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105 | std::ostream & operator<<(std::ostream &ost, const IndexedVectors &other)
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106 | {
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107 | for (IndexedVectors::indexedvectors_t::const_iterator iter = other.vectors.begin();
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108 | iter != other.vectors.end(); ++iter)
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109 | ost << "(" << iter->first << "," << iter->second << ") ";
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110 | return ost;
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111 | }
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112 |
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113 | template<> IndexedVectors ZeroInstance<IndexedVectors>()
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114 | {
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115 | IndexedVectors returnvalue;
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116 | return returnvalue;
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117 | }
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