source: src/Fragmentation/Summation/OrthogonalSummator.hpp@ e0ae58d

Action_Thermostats Add_AtomRandomPerturbation Add_FitFragmentPartialChargesAction Add_RotateAroundBondAction Add_SelectAtomByNameAction Added_ParseSaveFragmentResults AddingActions_SaveParseParticleParameters Adding_Graph_to_ChangeBondActions Adding_MD_integration_tests Adding_ParticleName_to_Atom Adding_StructOpt_integration_tests AtomFragments Automaking_mpqc_open AutomationFragmentation_failures Candidate_v1.5.4 Candidate_v1.6.0 Candidate_v1.6.1 ChangeBugEmailaddress ChangingTestPorts ChemicalSpaceEvaluator CombiningParticlePotentialParsing Combining_Subpackages Debian_Package_split Debian_package_split_molecuildergui_only Disabling_MemDebug Docu_Python_wait EmpiricalPotential_contain_HomologyGraph EmpiricalPotential_contain_HomologyGraph_documentation Enable_parallel_make_install Enhance_userguide Enhanced_StructuralOptimization Enhanced_StructuralOptimization_continued Example_ManyWaysToTranslateAtom Exclude_Hydrogens_annealWithBondGraph FitPartialCharges_GlobalError Fix_BoundInBox_CenterInBox_MoleculeActions Fix_ChargeSampling_PBC Fix_ChronosMutex Fix_FitPartialCharges Fix_FitPotential_needs_atomicnumbers Fix_ForceAnnealing Fix_IndependentFragmentGrids Fix_ParseParticles Fix_ParseParticles_split_forward_backward_Actions Fix_PopActions Fix_QtFragmentList_sorted_selection Fix_Restrictedkeyset_FragmentMolecule Fix_StatusMsg Fix_StepWorldTime_single_argument Fix_Verbose_Codepatterns Fix_fitting_potentials Fixes ForceAnnealing_goodresults ForceAnnealing_oldresults ForceAnnealing_tocheck ForceAnnealing_with_BondGraph ForceAnnealing_with_BondGraph_continued ForceAnnealing_with_BondGraph_continued_betteresults ForceAnnealing_with_BondGraph_contraction-expansion FragmentAction_writes_AtomFragments FragmentMolecule_checks_bonddegrees GeometryObjects Gui_Fixes Gui_displays_atomic_force_velocity ImplicitCharges IndependentFragmentGrids IndependentFragmentGrids_IndividualZeroInstances IndependentFragmentGrids_IntegrationTest IndependentFragmentGrids_Sole_NN_Calculation JobMarket_RobustOnKillsSegFaults JobMarket_StableWorkerPool JobMarket_unresolvable_hostname_fix MoreRobust_FragmentAutomation ODR_violation_mpqc_open PartialCharges_OrthogonalSummation PdbParser_setsAtomName PythonUI_with_named_parameters QtGui_reactivate_TimeChanged_changes Recreated_GuiChecks Rewrite_FitPartialCharges RotateToPrincipalAxisSystem_UndoRedo SaturateAtoms_findBestMatching SaturateAtoms_singleDegree StoppableMakroAction Subpackage_CodePatterns Subpackage_JobMarket Subpackage_LinearAlgebra Subpackage_levmar Subpackage_mpqc_open Subpackage_vmg Switchable_LogView ThirdParty_MPQC_rebuilt_buildsystem TrajectoryDependenant_MaxOrder TremoloParser_IncreasedPrecision TremoloParser_MultipleTimesteps TremoloParser_setsAtomName Ubuntu_1604_changes stable
Last change on this file since e0ae58d was a3fc46, checked in by Frederik Heber <heber@…>, 12 years ago

FIX: Fixed printKeyName inclusions a bit.

  • they are now inline functions.
  • Property mode set to 100644
File size: 6.7 KB
RevLine 
[56df37]1/*
[c6ca23]2 * OrthogonalSummator.hpp
[56df37]3 *
4 * Created on: 28.07.2012
5 * Author: heber
6 */
7
[c6ca23]8#ifndef ORTHOGONALSUMMATOR_HPP_
9#define ORTHOGONALSUMMATOR_HPP_
[56df37]10
11// include config.h
12#ifdef HAVE_CONFIG_H
13#include <config.h>
14#endif
15
16#include <boost/fusion/sequence.hpp>
17
[302345]18#include <iterator>
19
[3dd32f]20#include "CodePatterns/Assert.hpp"
21
[56df37]22#include "Fragmentation/Summation/OrthogonalSummation.hpp"
23#include "Fragmentation/Summation/SetValue.hpp"
24
[c6ca23]25/** OrthogonalSummator is a general class for making us of OrthogonalSummation.
[56df37]26 *
27 * The idea is that we want to sum up not only one value but a whole bunch of.
28 * However, in general the types of the values will all differ. We would like
29 * to call the summation in a as simple a fashion as possible and at best in
30 * a kind of for_each on each type/value.
31 * For this purpose we require a list of all the types, represented by the
32 * MPQCDataMap_t map that uses the types enumerated in namespace MPQCDataFused,
33 * see the simple example for the associative sequence in boost::fusion.
34 * The MPQCDataMap_t then gives the essential mapping from the type to a specific
35 * key. Via this key, which is a type and hence can be used for template
36 * specification, we may gather all information for launching the
37 * OrthogonalSummation. We only need to convert MPQCData into the above
38 * MPQCDataMap_t instance and may then access the member variables via the above
39 * key and also obtain the type at \b run-time through the key.
40 *
41 * Note that we then need a conversion from the type stored in the MPQCData,
42 * e.g. a vector<double>, to the type in MPQCDataMap_t, e.g. Histogram.
43 *
44 * Boost::fusion is very cool! If we have a namespace with just structs as keys
45 * and the fusion::map from these keys to the true types, then we may do ...
46 * \code
47 * MPQCDataMap_t MPQCDataMap;
48 * using namespace MPQCDataFused;
49 * double MPQCData_energy_total = boost::fusion::at_key<MPQCDataFused::energy_total>(MPQCDataMap);
50 * \endcode
51 * i.e. at_key knows the correct type!
52 *
53 */
54template <typename MapType, typename MapKey>
[c6ca23]55struct OrthogonalSummator {
[56df37]56 /** We retrieve the type of the MPQCData member variable from the
57 * boost::fusion::map and stored it in this typedef. Note that for
58 * internal types (e.g. MapValue::const_iterator we need to place
59 * \b typename before).
60 */
61 typedef typename boost::fusion::result_of::value_at_key<MapType, MapKey>::type MapValue;
62
[c6ca23]63 /** Constructor for class OrthogonalSummator.
[56df37]64 *
65 * \param _subsetmap map with hierarchy of IndexSet's
[c9f9bb]66 * \param _data MPQCData converted to MPQCDataMap_t type, associated to job id
[56df37]67 * \param _container container of IndexSet's such that each set has correct order
68 * to job id and hence to _data.
69 * \param _MatrixNrLookup lookup from job id to ordering in above vectors
70 */
[c6ca23]71 OrthogonalSummator(
[56df37]72 SubsetMap::ptr &_subsetmap,
[c9f9bb]73 const std::map<JobId_t, MapType> &_data,
[56df37]74 const IndexSetContainer::Container_t &_container,
[3dd32f]75 const std::map< JobId_t, size_t > &_MatrixNrLookup) :
[302345]76 indices(getSubsets(_data.size(),_container)),
[c9f9bb]77 values(createValues(_data, _container, _MatrixNrLookup)),
[a96b02]78 OS(indices, values, _subsetmap)
[56df37]79 {
[c9f9bb]80 ASSERT( _data.size() == _MatrixNrLookup.size(),
[c6ca23]81 "OrthogonalSummator() - ids and MatrixNrLookup don't have same size.");
[56df37]82 }
83
84 /** Summation operator.
85 *
86 * Initialises instantiated OrthogonalSummation of the respective type via
[c6ca23]87 * \a OrthogonalSummator::data, uses OrthogonalSummation::operator() to sum and returns
[56df37]88 * the result.
89 *
[a96b02]90 * \param level up to which level to sum up
[56df37]91 * \return result of OrthogonalSummation for given type from MPQCDataMap_t.
92 */
[ff9963]93 MapValue operator()(const size_t level)
[a96b02]94 {
95 // evaluate
[ff9963]96 const MapValue result = OS(level);
[a96b02]97 return result;
98 }
99
[69e065]100 /** Getter for the contribution of the SetValue<> to a specific \a index.
101 *
102 * @param index SetValue to this index
103 * @return contribution
104 */
105 MapValue getContributionForIndexSet(const IndexSet::ptr &ptr) const
106 {
107 typedef SetValueMap<MapValue> setvalues_t;
108 const setvalues_t &values = OS.getSetValues();
109 return values.getConstValue(ptr)->getContribution();
110 }
111
112 /** Getter for the value of the SetValue<> to a specific \a index.
113 *
114 * @param index SetValue to this index
115 * @return value
116 */
117 MapValue getValueForIndexSet(const IndexSet::ptr &ptr) const
118 {
119 typedef SetValueMap<MapValue> setvalues_t;
120 const setvalues_t &values = OS.getSetValues();
121 return values.getConstValue(ptr)->getValue();
122 }
123
[a96b02]124private:
125 /** Tiny helper to create the indices from a given IndexSetContainer.
126 *
127 * Basically, we just have to make sure we miss the last one but only
128 * if the \a container has more than one set.
129 *
[302345]130 * @param count how many indices of container to use
[a96b02]131 * @param container container with IndexSet
132 * @return all subsets contained in \a container
133 */
134 typename OrthogonalSummation<MapValue>::InputSets_t getSubsets(
[302345]135 const size_t count,
[a96b02]136 const IndexSetContainer::Container_t &container)
[56df37]137 {
[302345]138 IndexSetContainer::Container_t::const_iterator iter = container.begin();
139 std::advance(iter, count); // step till after desired element
140 typename OrthogonalSummation<MapValue>::InputSets_t indices(container.begin(), iter);
[a96b02]141 return indices;
142 }
143
144 /** Tiny helper to create the values for the summation in the correct order.
145 *
146 * @param data
147 * @param container
148 * @param MatrixNrLookup
149 * @return
150 */
151 typename OrthogonalSummation<MapValue>::InputValues_t createValues(
[c9f9bb]152 const std::map<JobId_t, MapType> &data,
[a96b02]153 const IndexSetContainer::Container_t &container,
[3dd32f]154 const std::map< JobId_t, size_t > &MatrixNrLookup)
[a96b02]155 {
[302345]156 // if the power set of , we don't need to get rid of the "union index set"
157 typename OrthogonalSummation<MapValue>::InputValues_t values(data.size());
[c9f9bb]158 for (typename std::map<JobId_t, MapType>::const_iterator dataiter = data.begin();
159 dataiter != data.end(); ++dataiter) {
160 const MapType &Data = dataiter->second;
161 const JobId_t &jobid = dataiter->first;
[56df37]162 const MapValue &value = boost::fusion::at_key<MapKey>(Data);
[3dd32f]163 const std::map< JobId_t, size_t >::const_iterator nriter = MatrixNrLookup.find(jobid);
164 ASSERT( nriter != MatrixNrLookup.end(),
165 "OrthogonalSummation<>::createValues() - MatrixNrLookup does not contain id "
166 +toString(jobid)+".");
167 values[ nriter->second ] = value;
[56df37]168 }
[a96b02]169 return values;
[56df37]170 }
171private:
[a96b02]172 //!> created indices for OS such that we may hand over refs
173 typename OrthogonalSummation<MapValue>::InputSets_t indices;
174 //!> created values for OS such that we may hand over refs
175 typename OrthogonalSummation<MapValue>::InputValues_t values;
176 //!> Summation instance to use in operator()(level)
177 OrthogonalSummation<MapValue> OS;
[56df37]178};
179
180
[c6ca23]181#endif /* ORTHOGONALSUMMATOR_HPP_ */
Note: See TracBrowser for help on using the repository browser.