| 1 | /*
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| 2 | * Project: MoleCuilder
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| 3 | * Description: creates and alters molecular systems
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| 4 | * Copyright (C) 2012 University of Bonn. All rights reserved.
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| 5 | *
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| 6 | *
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| 7 | * This file is part of MoleCuilder.
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| 8 | *
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| 9 | * MoleCuilder is free software: you can redistribute it and/or modify
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| 10 | * it under the terms of the GNU General Public License as published by
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| 11 | * the Free Software Foundation, either version 2 of the License, or
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| 12 | * (at your option) any later version.
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| 13 | *
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| 14 | * MoleCuilder is distributed in the hope that it will be useful,
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| 15 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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| 16 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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| 17 | * GNU General Public License for more details.
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| 18 | *
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| 19 | * You should have received a copy of the GNU General Public License
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| 20 | * along with MoleCuilder. If not, see <http://www.gnu.org/licenses/>.
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| 21 | */
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| 22 |
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| 23 | /*
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| 24 | * IndexSetContainer.cpp
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| 25 | *
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| 26 | * Created on: Aug 2, 2012
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| 27 | * Author: heber
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| 28 | */
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| 29 |
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| 30 |
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| 31 | // include config.h
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| 32 | #ifdef HAVE_CONFIG_H
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| 33 | #include <config.h>
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| 34 | #endif
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| 35 |
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| 36 | #include "CodePatterns/MemDebug.hpp"
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| 37 |
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| 38 | #include "IndexSetContainer.hpp"
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| 39 |
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| 40 | #include <iterator>
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| 41 |
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| 42 | #include "CodePatterns/Log.hpp"
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| 43 |
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| 44 | #include "Fragmentation/Summation/IndexSet.hpp"
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| 45 | #include "Fragmentation/KeySetsContainer.hpp"
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| 46 |
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| 47 | IndexSet::ptr IndexSetContainer::createSuperSet(const KeySetsContainer &_keysets) const
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| 48 | {
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| 49 | // create superset
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| 50 | IndexSet::ptr _AllIndices(new IndexSet);
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| 51 | for (KeySetsContainer::ArrayOfIntVectors::const_iterator iter = _keysets.KeySets.begin();
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| 52 | iter != _keysets.KeySets.end(); ++iter)
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| 53 | for(KeySetsContainer::IntVector::const_iterator keyiter = (*iter).begin();
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| 54 | keyiter != (*iter).end(); ++keyiter) {
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| 55 | if (*keyiter != -1)
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| 56 | _AllIndices->insert((Index_t)*keyiter);
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| 57 | }
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| 58 | LOG(1, "INFO: AllIndices is " << *_AllIndices << ".");
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| 59 |
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| 60 | return _AllIndices;
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| 61 | }
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| 62 |
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| 63 | IndexSetContainer::IndexSetContainer(const KeySetsContainer &_keysets) :
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| 64 | AllIndices(createSuperSet(_keysets))
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| 65 | {
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| 66 | const size_t SupersetSize = AllIndices->size();
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| 67 | // create container with all keysets
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| 68 | for (KeySetsContainer::ArrayOfIntVectors::const_iterator iter = _keysets.KeySets.begin();
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| 69 | iter != _keysets.KeySets.end(); ++iter) {
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| 70 | // create the IndexSets ...
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| 71 | IndexSet tempset;
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| 72 | for(KeySetsContainer::IntVector::const_iterator keyiter = (*iter).begin();
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| 73 | keyiter != (*iter).end(); ++keyiter)
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| 74 | if (*keyiter != -1)
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| 75 | tempset.insert((Index_t)*keyiter);
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| 76 | // ... and insert, making sure that super set is AllIndices when present
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| 77 | if (tempset.size() < SupersetSize)
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| 78 | insert(tempset);
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| 79 | else
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| 80 | insert(AllIndices);
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| 81 | }
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| 82 | }
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| 83 |
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| 84 | size_t IndexSetContainer::countSetsTillLevel(const size_t level) const
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| 85 | {
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| 86 | // check if any sets are present
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| 87 | if (getContainer().empty())
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| 88 | return 0;
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| 89 | // define ends of interval
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| 90 | SortedVector<IndexSet>::Container_t::const_iterator start = getContainer().begin();
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| 91 | SortedVector<IndexSet>::Container_t::const_iterator end = --getContainer().end();
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| 92 | // check whether all are smaller
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| 93 | if ((*end)->size() <= level)
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| 94 | return getContainer().size();
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| 95 | // check whether all are larger
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| 96 | if ((*start)->size() > level)
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| 97 | return 0;
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| 98 | // continue as long as interval has more than one element
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| 99 | while (std::distance(start, end) > 1) {
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| 100 | // create iterator in between
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| 101 | SortedVector<IndexSet>::Container_t::const_iterator midpoint = start;
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| 102 | std::advance( midpoint, std::distance(start, end)/2 );
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| 103 | // check iter and half the interval
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| 104 | if ((*midpoint)->size() <= level)
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| 105 | start = midpoint;
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| 106 | else
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| 107 | end = midpoint;
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| 108 | }
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| 109 | return std::distance(getContainer().begin(), end);
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| 110 | }
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