[fb69e9] | 1 | /*
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| 2 | * Project: MoleCuilder
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| 3 | * Description: creates and alters molecular systems
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| 4 | * Copyright (C) 2012 University of Bonn. All rights reserved.
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[5aaa43] | 5 | * Copyright (C) 2013 Frederik Heber. All rights reserved.
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[fb69e9] | 6 | *
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| 7 | *
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| 8 | * This file is part of MoleCuilder.
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| 9 | *
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| 10 | * MoleCuilder is free software: you can redistribute it and/or modify
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| 11 | * it under the terms of the GNU General Public License as published by
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| 12 | * the Free Software Foundation, either version 2 of the License, or
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| 13 | * (at your option) any later version.
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| 14 | *
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| 15 | * MoleCuilder is distributed in the hope that it will be useful,
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| 16 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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| 17 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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| 18 | * GNU General Public License for more details.
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| 19 | *
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| 20 | * You should have received a copy of the GNU General Public License
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| 21 | * along with MoleCuilder. If not, see <http://www.gnu.org/licenses/>.
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| 22 | */
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| 23 |
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| 24 | /*
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| 25 | * IndexSetContainer.cpp
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| 26 | *
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| 27 | * Created on: Aug 2, 2012
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| 28 | * Author: heber
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| 29 | */
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| 30 |
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| 31 |
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| 32 | // include config.h
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| 33 | #ifdef HAVE_CONFIG_H
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| 34 | #include <config.h>
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| 35 | #endif
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| 36 |
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| 37 | #include "CodePatterns/MemDebug.hpp"
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| 38 |
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| 39 | #include "IndexSetContainer.hpp"
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| 40 |
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[8a0e78] | 41 | #include <iterator>
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| 42 |
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[fb69e9] | 43 | #include "CodePatterns/Log.hpp"
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| 44 |
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| 45 | #include "Fragmentation/Summation/IndexSet.hpp"
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| 46 | #include "Fragmentation/KeySetsContainer.hpp"
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| 47 |
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[19c50e] | 48 | IndexSet::ptr IndexSetContainer::createSuperSet(const KeySetsContainer &_keysets) const
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[fb69e9] | 49 | {
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| 50 | // create superset
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[19c50e] | 51 | IndexSet::ptr _AllIndices(new IndexSet);
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[fb69e9] | 52 | for (KeySetsContainer::ArrayOfIntVectors::const_iterator iter = _keysets.KeySets.begin();
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| 53 | iter != _keysets.KeySets.end(); ++iter)
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| 54 | for(KeySetsContainer::IntVector::const_iterator keyiter = (*iter).begin();
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| 55 | keyiter != (*iter).end(); ++keyiter) {
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| 56 | if (*keyiter != -1)
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[19c50e] | 57 | _AllIndices->insert((Index_t)*keyiter);
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[fb69e9] | 58 | }
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[1b5a40] | 59 | LOG(2, "DEBUG: AllIndices is " << *_AllIndices << ".");
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[fb69e9] | 60 |
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[19c50e] | 61 | return _AllIndices;
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[fb69e9] | 62 | }
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| 63 |
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[781408] | 64 | IndexSet::ptr IndexSetContainer::createSuperSet(const std::vector<IndexSet> &_container) const
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| 65 | {
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| 66 | // create superset
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| 67 | IndexSet::ptr _AllIndices(new IndexSet);
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| 68 | for (std::vector<IndexSet>::const_iterator iter = _container.begin();
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| 69 | iter != _container.end(); ++iter)
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| 70 | for(IndexSet::const_iterator keyiter = (*iter).begin();
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| 71 | keyiter != (*iter).end(); ++keyiter) {
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| 72 | if (*keyiter != -1)
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| 73 | _AllIndices->insert((Index_t)*keyiter);
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| 74 | }
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| 75 | LOG(2, "DEBUG: AllIndices is " << *_AllIndices << ".");
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| 76 |
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| 77 | return _AllIndices;
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| 78 | }
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| 79 |
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| 80 | IndexSet::ptr IndexSetContainer::createSuperSet(const std::vector<IndexSet::ptr> &_container) const
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| 81 | {
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| 82 | // create superset
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| 83 | IndexSet::ptr _AllIndices(new IndexSet);
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| 84 | for (std::vector<IndexSet::ptr>::const_iterator iter = _container.begin();
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| 85 | iter != _container.end(); ++iter)
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| 86 | for(IndexSet::const_iterator keyiter = (*iter)->begin();
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| 87 | keyiter != (*iter)->end(); ++keyiter) {
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| 88 | if (*keyiter != -1)
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| 89 | _AllIndices->insert((Index_t)*keyiter);
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| 90 | }
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| 91 | LOG(2, "DEBUG: AllIndices is " << *_AllIndices << ".");
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| 92 |
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| 93 | return _AllIndices;
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| 94 | }
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| 95 |
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[fb69e9] | 96 | IndexSetContainer::IndexSetContainer(const KeySetsContainer &_keysets) :
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[19c50e] | 97 | AllIndices(createSuperSet(_keysets))
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[fb69e9] | 98 | {
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[19c50e] | 99 | const size_t SupersetSize = AllIndices->size();
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[fb69e9] | 100 | // create container with all keysets
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| 101 | for (KeySetsContainer::ArrayOfIntVectors::const_iterator iter = _keysets.KeySets.begin();
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| 102 | iter != _keysets.KeySets.end(); ++iter) {
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[19c50e] | 103 | // create the IndexSets ...
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[fb69e9] | 104 | IndexSet tempset;
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| 105 | for(KeySetsContainer::IntVector::const_iterator keyiter = (*iter).begin();
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| 106 | keyiter != (*iter).end(); ++keyiter)
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| 107 | if (*keyiter != -1)
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| 108 | tempset.insert((Index_t)*keyiter);
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[19c50e] | 109 | // ... and insert, making sure that super set is AllIndices when present
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| 110 | if (tempset.size() < SupersetSize)
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[fb69e9] | 111 | insert(tempset);
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[19c50e] | 112 | else
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| 113 | insert(AllIndices);
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[fb69e9] | 114 | }
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| 115 | }
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[8a0e78] | 116 |
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| 117 | size_t IndexSetContainer::countSetsTillLevel(const size_t level) const
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| 118 | {
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| 119 | // check if any sets are present
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| 120 | if (getContainer().empty())
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| 121 | return 0;
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| 122 | // define ends of interval
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| 123 | SortedVector<IndexSet>::Container_t::const_iterator start = getContainer().begin();
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| 124 | SortedVector<IndexSet>::Container_t::const_iterator end = --getContainer().end();
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| 125 | // check whether all are smaller
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| 126 | if ((*end)->size() <= level)
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| 127 | return getContainer().size();
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| 128 | // check whether all are larger
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| 129 | if ((*start)->size() > level)
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| 130 | return 0;
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| 131 | // continue as long as interval has more than one element
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| 132 | while (std::distance(start, end) > 1) {
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| 133 | // create iterator in between
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| 134 | SortedVector<IndexSet>::Container_t::const_iterator midpoint = start;
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| 135 | std::advance( midpoint, std::distance(start, end)/2 );
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| 136 | // check iter and half the interval
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| 137 | if ((*midpoint)->size() <= level)
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| 138 | start = midpoint;
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| 139 | else
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| 140 | end = midpoint;
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| 141 | }
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| 142 | return std::distance(getContainer().begin(), end);
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| 143 | }
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