1 | /*
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2 | * DataConverter.hpp
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3 | *
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4 | * Created on: Aug 27, 2012
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5 | * Author: heber
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6 | */
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7 |
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8 | #ifndef DATACONVERTER_HPP_
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9 | #define DATACONVERTER_HPP_
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10 |
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11 |
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12 | // include config.h
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13 | #ifdef HAVE_CONFIG_H
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14 | #include <config.h>
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15 | #endif
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16 |
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17 | #include <map>
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18 | #include <boost/fusion/sequence.hpp>
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19 |
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20 | #include "CodePatterns/Assert.hpp"
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21 |
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22 | #ifdef HAVE_JOBMARKET
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23 | #include "JobMarket/types.hpp"
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24 | #else
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25 | typedef size_t JobId_t;
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26 | #endif
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27 |
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28 | #include "Fragmentation/KeySetsContainer.hpp"
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29 | #include "Fragmentation/Summation/SetValues/Eigenvalues.hpp"
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30 | #include "Fragmentation/Summation/SetValues/Histogram.hpp"
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31 | #include "Fragmentation/Summation/SetValues/Fragment.hpp"
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32 | #include "Fragmentation/Summation/SetValues/IndexedVectors.hpp"
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33 |
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34 | #include "Fragmentation/Summation/Containers/MPQCData.hpp"
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35 | #include "Fragmentation/Summation/Containers/MPQCDataFused.hpp"
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36 | #include "Fragmentation/Summation/Containers/MPQCDataMap.hpp"
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37 | #ifdef HAVE_VMG
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38 | #include "Fragmentation/Summation/Containers/VMGData.hpp"
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39 | #include "Fragmentation/Summation/Containers/VMGDataFused.hpp"
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40 | #include "Fragmentation/Summation/Containers/VMGDataMap.hpp"
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41 | #endif
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42 |
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43 | template <typename source, typename dest>
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44 | inline void convertDataTo(
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45 | const std::map<JobId_t, source> &fragmentData,
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46 | std::map<JobId_t, dest> &MPQCData_fused)
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47 | {
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48 | MPQCData_fused.clear();
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49 | }
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50 |
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51 | template <>
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52 | inline void convertDataTo<MPQCData, MPQCDataEnergyMap_t>(
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53 | const std::map<JobId_t, MPQCData> &fragmentData,
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54 | std::map<JobId_t, MPQCDataEnergyMap_t> &MPQCData_Energy_fused)
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55 | {
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56 | // energy_t
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57 | MPQCData_Energy_fused.clear();
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58 | for(std::map<JobId_t, MPQCData>::const_iterator dataiter = fragmentData.begin();
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59 | dataiter != fragmentData.end(); ++dataiter) {
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60 | const MPQCData &extractedData = dataiter->second;
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61 | LOG(4, "DEBUG: Current extracted Data is " << extractedData << ".");
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62 | MPQCDataEnergyMap_t instance;
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63 | boost::fusion::at_key<MPQCDataFused::energy_total>(instance) = extractedData.energies.total;
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64 | boost::fusion::at_key<MPQCDataFused::energy_nuclear_repulsion>(instance) = extractedData.energies.nuclear_repulsion;
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65 | boost::fusion::at_key<MPQCDataFused::energy_electron_coulomb>(instance) = extractedData.energies.electron_coulomb;
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66 | boost::fusion::at_key<MPQCDataFused::energy_electron_exchange>(instance) = extractedData.energies.electron_exchange;
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67 | boost::fusion::at_key<MPQCDataFused::energy_correlation>(instance) = extractedData.energies.correlation;
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68 | boost::fusion::at_key<MPQCDataFused::energy_overlap>(instance) = extractedData.energies.overlap;
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69 | boost::fusion::at_key<MPQCDataFused::energy_kinetic>(instance) = extractedData.energies.kinetic;
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70 | boost::fusion::at_key<MPQCDataFused::energy_hcore>(instance) = extractedData.energies.hcore;
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71 | boost::fusion::at_key<MPQCDataFused::energy_eigenvalues>(instance) = extractedData.energies.eigenvalues;
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72 | boost::fusion::at_key<MPQCDataFused::energy_eigenhistogram>(instance) = extractedData.energies.eigenvalues;
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73 | MPQCData_Energy_fused.insert( std::make_pair(dataiter->first, instance) );
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74 | }
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75 | }
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76 |
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77 | #ifdef HAVE_VMG
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78 | template <>
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79 | inline void convertDataTo<VMGData, VMGDataMap_t>(
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80 | const std::map<JobId_t, VMGData> &longrangeData,
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81 | std::map<JobId_t, VMGDataMap_t> &VMGData_fused)
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82 | {
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83 | // energy_t
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84 | VMGData_fused.clear();
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85 | for(std::map<JobId_t, VMGData>::const_iterator dataiter = longrangeData.begin();
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86 | dataiter != longrangeData.end(); ++dataiter) {
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87 | const VMGData &extractedData = dataiter->second;
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88 | LOG(4, "DEBUG: Current extracted Data is " << extractedData << ".");
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89 | VMGDataMap_t instance;
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90 | boost::fusion::at_key<VMGDataFused::nuclei_long>(instance) = extractedData.nuclei_long;
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91 | boost::fusion::at_key<VMGDataFused::electron_long>(instance) = extractedData.electron_long;
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92 | VMGData_fused.insert( std::make_pair(dataiter->first, instance) );
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93 | }
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94 | }
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95 |
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96 | template <>
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97 | inline void convertDataTo<VMGData, VMGDataGridMap_t>(
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98 | const std::map<JobId_t, VMGData> &longrangeData,
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99 | std::map<JobId_t, VMGDataGridMap_t> &VMGData_fused)
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100 | {
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101 | // energy_t
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102 | VMGData_fused.clear();
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103 | for(std::map<JobId_t, VMGData>::const_iterator dataiter = longrangeData.begin();
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104 | dataiter != longrangeData.end(); ++dataiter) {
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105 | const VMGData &extractedData = dataiter->second;
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106 | LOG(4, "DEBUG: Current extracted Data is " << extractedData << ".");
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107 | VMGDataGridMap_t instance;
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108 | boost::fusion::at_key<VMGDataFused::sampled_potential>(instance) = extractedData.sampled_potential;
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109 | boost::fusion::at_key<VMGDataFused::both_sampled_potential>(instance) = extractedData.both_sampled_potential;
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110 | VMGData_fused.insert( std::make_pair(dataiter->first, instance) );
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111 | }
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112 | }
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113 | #endif
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114 |
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115 | template <class datatype, class dataforcemap, class dataforcefused>
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116 | inline void convertDatatoForceMap(
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117 | const std::map<JobId_t, datatype> &fragmentData,
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118 | const KeySetsContainer &ForceKeySet,
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119 | std::map<JobId_t, dataforcemap> &Data_Force_fused)
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120 | {
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121 | // forces
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122 | ASSERT( ForceKeySet.KeySets.size() == fragmentData.size(),
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123 | "FragmentationAutomationAction::performCall() - indices and fragmentData differ in size.");
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124 | Data_Force_fused.clear();
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125 | typename std::map<JobId_t, datatype>::const_iterator dataiter = fragmentData.begin();
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126 | KeySetsContainer::ArrayOfIntVectors::const_iterator arrayiter = ForceKeySet.KeySets.begin();
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127 | for(;dataiter != fragmentData.end(); ++dataiter, ++arrayiter) {
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128 | const datatype &extractedData = dataiter->second;
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129 | LOG(4, "DEBUG: Current extracted Data is " << extractedData << ".");
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130 | dataforcemap instance;
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131 | // must convert int to index_t
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132 | if (DoLog(5)) {
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133 | std::stringstream output;
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134 | for (KeySetsContainer::IntVector::const_iterator outiter = arrayiter->begin();
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135 | outiter != arrayiter->end(); ++outiter) {
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136 | output << *outiter << "\t";
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137 | }
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138 | LOG(5, "DEBUG: indices are " << output.str());
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139 | }
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140 | IndexedVectors::indices_t indices(arrayiter->begin(), arrayiter->end());
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141 | boost::fusion::at_key<typename dataforcefused::forces>(instance) =
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142 | IndexedVectors(indices, extractedData.forces);
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143 | Data_Force_fused.insert( std::make_pair(dataiter->first, instance) );
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144 | }
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145 | }
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146 |
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147 | template <>
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148 | inline void convertDataTo<MPQCData, MPQCDataGridMap_t>(
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149 | const std::map<JobId_t, MPQCData> &fragmentData,
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150 | std::map<JobId_t, MPQCDataGridMap_t> &MPQCData_Grid_fused)
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151 | {
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152 | // sampled_grid
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153 | MPQCData_Grid_fused.clear();
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154 | for(std::map<JobId_t, MPQCData>::const_iterator dataiter = fragmentData.begin();
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155 | dataiter != fragmentData.end(); ++dataiter) {
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156 | const MPQCData &extractedData = dataiter->second;
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157 | LOG(4, "DEBUG: Current extracted Data is " << extractedData << ".");
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158 | MPQCDataGridMap_t instance;
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159 | boost::fusion::at_key<MPQCDataFused::sampled_grid>(instance) = extractedData.sampled_grid;
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160 | MPQCData_Grid_fused.insert( std::make_pair(dataiter->first, instance) );
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161 | }
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162 | }
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163 |
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164 | template <>
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165 | inline void convertDataTo<MPQCData, MPQCDataFragmentMap_t>(
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166 | const std::map<JobId_t, MPQCData> &fragmentData,
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167 | std::map<JobId_t, MPQCDataFragmentMap_t> &MPQCData_Fragment_fused)
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168 | {
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169 | // fragment
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170 | MPQCData_Fragment_fused.clear();
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171 | for(std::map<JobId_t, MPQCData>::const_iterator dataiter = fragmentData.begin();
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172 | dataiter != fragmentData.end(); ++dataiter) {
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173 | const MPQCData &extractedData = dataiter->second;
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174 | LOG(4, "DEBUG: Current extracted Data is " << extractedData << ".");
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175 | MPQCDataFragmentMap_t instance;
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176 | boost::fusion::at_key<MPQCDataFused::fragment>(instance) =
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177 | Fragment(extractedData.positions, extractedData.charges);
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178 | MPQCData_Fragment_fused.insert( std::make_pair(dataiter->first, instance) );
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179 | }
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180 | }
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181 |
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182 | template <>
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183 | inline void convertDataTo<MPQCData, MPQCDataTimeMap_t>(
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184 | const std::map<JobId_t, MPQCData> &fragmentData,
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185 | std::map<JobId_t, MPQCDataTimeMap_t> &MPQCData_Time_fused)
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186 | {
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187 | // times
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188 | MPQCData_Time_fused.clear();
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189 | for(std::map<JobId_t, MPQCData>::const_iterator dataiter = fragmentData.begin();
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190 | dataiter != fragmentData.end(); ++dataiter) {
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191 | const MPQCData &extractedData = dataiter->second;
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192 | LOG(4, "DEBUG: Current extracted Data is " << extractedData << ".");
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193 | MPQCDataTimeMap_t instance;
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194 | boost::fusion::at_key<MPQCDataFused::times_total_walltime>(instance) = extractedData.times.total_walltime;
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195 | boost::fusion::at_key<MPQCDataFused::times_total_cputime>(instance) = extractedData.times.total_cputime;
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196 | boost::fusion::at_key<MPQCDataFused::times_total_flops>(instance) = extractedData.times.total_flops;
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197 | boost::fusion::at_key<MPQCDataFused::times_gather_walltime>(instance) = extractedData.times.gather_walltime;
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198 | boost::fusion::at_key<MPQCDataFused::times_gather_cputime>(instance) = extractedData.times.gather_cputime;
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199 | boost::fusion::at_key<MPQCDataFused::times_gather_flops>(instance) = extractedData.times.gather_flops;
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200 | MPQCData_Time_fused.insert( std::make_pair(dataiter->first, instance) );
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201 | }
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202 | }
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203 |
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204 |
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205 | #endif /* DATACONVERTER_HPP_ */
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