| 1 | # PLEASE adhere to the alphabetical ordering in this Makefile!
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| 2 | # Also indentation by a single tab
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| 3 |
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| 4 | FRAGMENTATIONSOURCE = \
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| 5 | Fragmentation/Evaluation/StabilityEvaluator.cpp \
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| 6 | Fragmentation/Exporters/ExportGraph_ToAtomFragments.cpp \
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| 7 | Fragmentation/Exporters/ExportGraph_ToFiles.cpp \
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| 8 | Fragmentation/Exporters/ExportGraph_ToJobs.cpp \
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| 9 | Fragmentation/Exporters/ExportGraph.cpp \
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| 10 | Fragmentation/Exporters/HydrogenPool.cpp \
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| 11 | Fragmentation/Exporters/SaturatedBond.cpp \
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| 12 | Fragmentation/Exporters/SaturatedFragment.cpp \
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| 13 | Fragmentation/Exporters/SaturationDistanceMaximizer.cpp \
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| 14 | Fragmentation/Exporters/SphericalPointDistribution.cpp \
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| 15 | Fragmentation/Exporters/SphericalPointDistribution_getConnections.cpp \
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| 16 | Fragmentation/Exporters/SphericalPointDistribution_getPoints.cpp \
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| 17 | Fragmentation/Homology/AtomFragmentsMap.cpp \
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| 18 | Fragmentation/Homology/FragmentEdge.cpp \
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| 19 | Fragmentation/Homology/FragmentNode.cpp \
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| 20 | Fragmentation/Homology/HomologyContainer.cpp \
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| 21 | Fragmentation/Homology/HomologyGraph.cpp \
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| 22 | Fragmentation/AdaptivityMap.cpp \
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| 23 | Fragmentation/BondsPerShortestPath.cpp \
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| 24 | Fragmentation/EnergyMatrix.cpp \
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| 25 | Fragmentation/ForceMatrix.cpp \
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| 26 | Fragmentation/Fragmentation.cpp \
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| 27 | Fragmentation/fragmentation_helpers.cpp \
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| 28 | Fragmentation/Graph.cpp \
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| 29 | Fragmentation/helpers.cpp \
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| 30 | Fragmentation/HessianMatrix.cpp \
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| 31 | Fragmentation/Interfragmenter.cpp \
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| 32 | Fragmentation/KeySet.cpp \
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| 33 | Fragmentation/MatrixContainer.cpp \
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| 34 | Fragmentation/PowerSetGenerator.cpp \
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| 35 | Fragmentation/SortIndex.cpp \
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| 36 | Fragmentation/UniqueFragments.cpp
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| 37 |
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| 38 | FRAGMENTATIONHEADER = \
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| 39 | Fragmentation/Evaluation/StabilityEvaluator.hpp \
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| 40 | Fragmentation/Exporters/ExportGraph_ToAtomFragments.hpp \
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| 41 | Fragmentation/Exporters/ExportGraph_ToFiles.hpp \
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| 42 | Fragmentation/Exporters/ExportGraph_ToJobs.hpp \
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| 43 | Fragmentation/Exporters/ExportGraph.hpp \
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| 44 | Fragmentation/Exporters/HydrogenPool.hpp \
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| 45 | Fragmentation/Exporters/SaturatedBond.hpp \
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| 46 | Fragmentation/Exporters/SaturatedFragment.hpp \
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| 47 | Fragmentation/Exporters/SaturationDistanceMaximizer.hpp \
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| 48 | Fragmentation/Exporters/SphericalPointDistribution.hpp \
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| 49 | Fragmentation/Homology/AtomFragmentsMap.hpp \
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| 50 | Fragmentation/Homology/FragmentEdge.hpp \
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| 51 | Fragmentation/Homology/FragmentNode.hpp \
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| 52 | Fragmentation/Homology/HomologyContainer.hpp \
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| 53 | Fragmentation/Homology/HomologyGraph.hpp \
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| 54 | Fragmentation/AdaptivityMap.hpp \
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| 55 | Fragmentation/AtomMask.hpp \
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| 56 | Fragmentation/BondsPerShortestPath.hpp \
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| 57 | Fragmentation/defs.hpp \
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| 58 | Fragmentation/EdgesPerFragment.hpp \
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| 59 | Fragmentation/EnergyMatrix.hpp \
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| 60 | Fragmentation/ForceMatrix.hpp \
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| 61 | Fragmentation/Fragmentation.hpp \
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| 62 | Fragmentation/fragmentation_helpers.hpp \
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| 63 | Fragmentation/Graph.hpp \
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| 64 | Fragmentation/helpers.cpp \
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| 65 | Fragmentation/helpers.hpp \
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| 66 | Fragmentation/HessianMatrix.hpp \
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| 67 | Fragmentation/HydrogenSaturation_enum.hpp \
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| 68 | Fragmentation/Interfragmenter.hpp \
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| 69 | Fragmentation/KeySet.hpp \
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| 70 | Fragmentation/MatrixContainer.hpp \
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| 71 | Fragmentation/Mask.hpp \
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| 72 | Fragmentation/MoleculeMask.hpp \
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| 73 | Fragmentation/PowerSetGenerator.hpp \
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| 74 | Fragmentation/SortIndex.hpp \
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| 75 | Fragmentation/UniqueFragments.hpp
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| 76 |
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| 77 | lib_LTLIBRARIES += \
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| 78 | libMolecuilderFragmentation_KeysetsContainer.la
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| 79 | noinst_LTLIBRARIES += \
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| 80 | libMolecuilderFragmentation.la \
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| 81 | libMolecuilderFragmentation_getFromKeyset.la \
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| 82 | libMolecuilderFragmentation_getFromKeysetStub.la
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| 83 | libMolecuilderFragmentation_la_includedir = $(includedir)/MoleCuilder/
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| 84 | libMolecuilderFragmentation_KeysetsContainer_la_includedir = $(includedir)/MoleCuilder/
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| 85 | libMolecuilderFragmentation_getFromKeyset_la_includedir = $(includedir)/MoleCuilder/
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| 86 | libMolecuilderFragmentation_getFromKeysetStub_la_includedir = $(includedir)/MoleCuilder/
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| 87 | libMolecuilderFragmentation_la_CPPFLAGS = $(AM_CPPFLAGS)
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| 88 | libMolecuilderFragmentation_la_LDFLAGS = $(AM_LDFLAGS)
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| 89 | libMolecuilderFragmentation_KeysetsContainer_la_LIBADD = \
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| 90 | $(CodePatterns_LIBS)
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| 91 | libMolecuilderFragmentation_la_LIBADD =
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| 92 | if CONDJOBMARKET
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| 93 | libMolecuilderFragmentation_la_CPPFLAGS += ${JobMarket_CFLAGS}
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| 94 | libMolecuilderFragmentation_la_LDFLAGS += $(JobMarket_LDFLAGS)
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| 95 | libMolecuilderFragmentation_la_LIBADD += $(JobMarket_LIBS)
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| 96 | endif
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| 97 |
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| 98 | nobase_libMolecuilderFragmentation_la_include_HEADERS = ${FRAGMENTATIONHEADER}
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| 99 | nobase_libMolecuilderFragmentation_KeysetsContainer_la_include_HEADERS = \
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| 100 | Fragmentation/KeySetsContainer.hpp \
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| 101 | Fragmentation/parseKeySetFile.hpp
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| 102 |
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| 103 | ## Define the source file list for the "libexample-@MOLECUILDER_API_VERSION@.la"
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| 104 | ## target. Note that @MOLECUILDER_API_VERSION@ is not interpreted by Automake and
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| 105 | ## will therefore be treated as if it were literally part of the target name,
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| 106 | ## and the variable name derived from that.
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| 107 | ## The file extension .cc is recognized by Automake, and makes it produce
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| 108 | ## rules which invoke the C++ compiler to produce a libtool object file (.lo)
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| 109 | ## from each source file. Note that it is not necessary to list header files
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| 110 | ## which are already listed elsewhere in a _HEADERS variable assignment.
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| 111 | libMolecuilderFragmentation_la_SOURCES = ${FRAGMENTATIONSOURCE}
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| 112 | libMolecuilderFragmentation_KeysetsContainer_la_SOURCES = \
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| 113 | Fragmentation/KeySetsContainer.cpp \
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| 114 | Fragmentation/parseKeySetFile.cpp
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| 115 | libMolecuilderFragmentation_getFromKeyset_la_SOURCES = \
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| 116 | Fragmentation/Homology/HomologyGraph_getFromKeyset.cpp
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| 117 | libMolecuilderFragmentation_getFromKeysetStub_la_SOURCES = \
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| 118 | Fragmentation/Homology/HomologyGraph_getFromKeysetStub.cpp
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| 119 |
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| 120 | ## Instruct libtool to include ABI version information in the generated shared
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| 121 | ## library file (.so). The library ABI version is defined in configure.ac, so
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| 122 | ## that all version information is kept in one place.
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| 123 | libMolecuilderFragmentation_KeysetsContainer_la_LDFLAGS = $(AM_LDFLAGS) -version-info $(MOLECUILDER_SO_VERSION)
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| 124 |
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| 125 | ## The generated configuration header is installed in its own subdirectory of
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| 126 | ## $(libdir). The reason for this is that the configuration information put
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| 127 | ## into this header file describes the target platform the installed library
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| 128 | ## has been built for. Thus the file must not be installed into a location
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| 129 | ## intended for architecture-independent files, as defined by the Filesystem
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| 130 | ## Hierarchy Standard (FHS).
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| 131 | ## The nodist_ prefix instructs Automake to not generate rules for including
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| 132 | ## the listed files in the distribution on 'make dist'. Files that are listed
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| 133 | ## in _HEADERS variables are normally included in the distribution, but the
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| 134 | ## configuration header file is generated at configure time and should not be
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| 135 | ## shipped with the source tarball.
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| 136 | libMolecuilderFragmentation_KeysetsContainer_libincludedir = $(libdir)/MoleCuilder/include
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| 137 | #nodist_libMolecuilderFragmentation_KeysetsContainer_libinclude_HEADERS = $(top_builddir)/libmolecuilder_config.h
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