[a9b86d] | 1 | # PLEASE adhere to the alphabetical ordering in this Makefile!
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| 2 | # Also indentation by a single tab
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| 3 |
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| 4 | FRAGMENTATIONSOURCE = \
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[d9dbef] | 5 | Fragmentation/Exporters/ExportGraph_ToAtomFragments.cpp \
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[ca8bea] | 6 | Fragmentation/Exporters/ExportGraph_ToFiles.cpp \
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[786d28] | 7 | Fragmentation/Exporters/ExportGraph_ToJobs.cpp \
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[ca8bea] | 8 | Fragmentation/Exporters/ExportGraph.cpp \
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[c3df23] | 9 | Fragmentation/Exporters/HydrogenPool.cpp \
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[bac32f] | 10 | Fragmentation/Exporters/SaturatedBond.cpp \
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[7d5fcd] | 11 | Fragmentation/Exporters/SaturatedFragment.cpp \
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[a1d1dd] | 12 | Fragmentation/Exporters/SaturationDistanceMaximizer.cpp \
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[f54930] | 13 | Fragmentation/Exporters/SphericalPointDistribution.cpp \
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[6393ff] | 14 | Fragmentation/Exporters/SphericalPointDistribution_getConnections.cpp \
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[f54930] | 15 | Fragmentation/Exporters/SphericalPointDistribution_getPoints.cpp \
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[d713ce] | 16 | Fragmentation/Homology/AtomFragmentsMap.cpp \
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[8387e0] | 17 | Fragmentation/Homology/FragmentEdge.cpp \
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| 18 | Fragmentation/Homology/FragmentNode.cpp \
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[4694df] | 19 | Fragmentation/Homology/HomologyContainer.cpp \
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[7b6b21f] | 20 | Fragmentation/Homology/HomologyGraph.cpp \
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[730d7a] | 21 | Fragmentation/AdaptivityMap.cpp \
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[212c179] | 22 | Fragmentation/BondsPerShortestPath.cpp \
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[a9b86d] | 23 | Fragmentation/EnergyMatrix.cpp \
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| 24 | Fragmentation/ForceMatrix.cpp \
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[246e13] | 25 | Fragmentation/Fragmentation.cpp \
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[d9a032] | 26 | Fragmentation/fragmentation_helpers.cpp \
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[dadc74] | 27 | Fragmentation/Graph.cpp \
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[a9b86d] | 28 | Fragmentation/helpers.cpp \
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| 29 | Fragmentation/HessianMatrix.cpp \
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[0331ee] | 30 | Fragmentation/Interfragmenter.cpp \
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[f0674a] | 31 | Fragmentation/KeySet.cpp \
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[a03d25] | 32 | Fragmentation/MatrixContainer.cpp \
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[f67817f] | 33 | Fragmentation/PowerSetGenerator.cpp \
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[dcbb5d] | 34 | Fragmentation/SortIndex.cpp \
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[a03d25] | 35 | Fragmentation/UniqueFragments.cpp
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[a9b86d] | 36 |
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| 37 | FRAGMENTATIONHEADER = \
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[d9dbef] | 38 | Fragmentation/Exporters/ExportGraph_ToAtomFragments.hpp \
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[ca8bea] | 39 | Fragmentation/Exporters/ExportGraph_ToFiles.hpp \
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[786d28] | 40 | Fragmentation/Exporters/ExportGraph_ToJobs.hpp \
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[ca8bea] | 41 | Fragmentation/Exporters/ExportGraph.hpp \
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[c3df23] | 42 | Fragmentation/Exporters/HydrogenPool.hpp \
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[bac32f] | 43 | Fragmentation/Exporters/SaturatedBond.hpp \
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[7d5fcd] | 44 | Fragmentation/Exporters/SaturatedFragment.hpp \
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[a1d1dd] | 45 | Fragmentation/Exporters/SaturationDistanceMaximizer.hpp \
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[e895f7] | 46 | Fragmentation/Exporters/SphericalPointDistribution.hpp \
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[d713ce] | 47 | Fragmentation/Homology/AtomFragmentsMap.hpp \
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[8387e0] | 48 | Fragmentation/Homology/FragmentEdge.hpp \
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| 49 | Fragmentation/Homology/FragmentNode.hpp \
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[4694df] | 50 | Fragmentation/Homology/HomologyContainer.hpp \
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[7b6b21f] | 51 | Fragmentation/Homology/HomologyGraph.hpp \
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[730d7a] | 52 | Fragmentation/AdaptivityMap.hpp \
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[f96874] | 53 | Fragmentation/AtomMask.hpp \
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[212c179] | 54 | Fragmentation/BondsPerShortestPath.hpp \
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[a9b86d] | 55 | Fragmentation/defs.hpp \
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[041a79] | 56 | Fragmentation/EdgesPerFragment.hpp \
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[a9b86d] | 57 | Fragmentation/EnergyMatrix.hpp \
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| 58 | Fragmentation/ForceMatrix.hpp \
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[246e13] | 59 | Fragmentation/Fragmentation.hpp \
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[f67817f] | 60 | Fragmentation/fragmentation_helpers.hpp \
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[dadc74] | 61 | Fragmentation/Graph.hpp \
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| 62 | Fragmentation/helpers.cpp \
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[a9b86d] | 63 | Fragmentation/helpers.hpp \
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| 64 | Fragmentation/HessianMatrix.hpp \
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[262ecc] | 65 | Fragmentation/HydrogenSaturation_enum.hpp \
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[0331ee] | 66 | Fragmentation/Interfragmenter.hpp \
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[f0674a] | 67 | Fragmentation/KeySet.hpp \
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[a03d25] | 68 | Fragmentation/MatrixContainer.hpp \
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[f96874] | 69 | Fragmentation/Mask.hpp \
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| 70 | Fragmentation/MoleculeMask.hpp \
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[f67817f] | 71 | Fragmentation/PowerSetGenerator.hpp \
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[dcbb5d] | 72 | Fragmentation/SortIndex.hpp \
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[a03d25] | 73 | Fragmentation/UniqueFragments.hpp
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[a9b86d] | 74 |
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[fbf143] | 75 | lib_LTLIBRARIES += \
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| 76 | libMolecuilderFragmentation_KeysetsContainer.la
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[fe0355] | 77 | noinst_LTLIBRARIES += \
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| 78 | libMolecuilderFragmentation.la \
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| 79 | libMolecuilderFragmentation_getFromKeyset.la \
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| 80 | libMolecuilderFragmentation_getFromKeysetStub.la
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[214240] | 81 | libMolecuilderFragmentation_la_includedir = $(includedir)/MoleCuilder/
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| 82 | libMolecuilderFragmentation_KeysetsContainer_la_includedir = $(includedir)/MoleCuilder/
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| 83 | libMolecuilderFragmentation_getFromKeyset_la_includedir = $(includedir)/MoleCuilder/
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| 84 | libMolecuilderFragmentation_getFromKeysetStub_la_includedir = $(includedir)/MoleCuilder/
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[ac9ca4] | 85 | libMolecuilderFragmentation_la_CPPFLAGS = $(AM_CPPFLAGS)
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| 86 | libMolecuilderFragmentation_la_LDFLAGS = $(AM_LDFLAGS)
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[fbf143] | 87 | libMolecuilderFragmentation_KeysetsContainer_la_LIBADD = \
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| 88 | $(CodePatterns_LIBS)
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[ac9ca4] | 89 | libMolecuilderFragmentation_la_LIBADD =
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| 90 | if CONDJOBMARKET
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| 91 | libMolecuilderFragmentation_la_CPPFLAGS += ${JobMarket_CFLAGS}
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| 92 | libMolecuilderFragmentation_la_LDFLAGS += $(JobMarket_LDFLAGS)
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| 93 | libMolecuilderFragmentation_la_LIBADD += $(JobMarket_LIBS)
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| 94 | endif
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[a9b86d] | 95 |
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| 96 | nobase_libMolecuilderFragmentation_la_include_HEADERS = ${FRAGMENTATIONHEADER}
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[fbf143] | 97 | nobase_libMolecuilderFragmentation_KeysetsContainer_la_include_HEADERS = \
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| 98 | Fragmentation/KeySetsContainer.hpp \
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| 99 | Fragmentation/parseKeySetFile.hpp
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[a9b86d] | 100 |
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| 101 | ## Define the source file list for the "libexample-@MOLECUILDER_API_VERSION@.la"
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| 102 | ## target. Note that @MOLECUILDER_API_VERSION@ is not interpreted by Automake and
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| 103 | ## will therefore be treated as if it were literally part of the target name,
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| 104 | ## and the variable name derived from that.
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| 105 | ## The file extension .cc is recognized by Automake, and makes it produce
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| 106 | ## rules which invoke the C++ compiler to produce a libtool object file (.lo)
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| 107 | ## from each source file. Note that it is not necessary to list header files
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| 108 | ## which are already listed elsewhere in a _HEADERS variable assignment.
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| 109 | libMolecuilderFragmentation_la_SOURCES = ${FRAGMENTATIONSOURCE}
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[fbf143] | 110 | libMolecuilderFragmentation_KeysetsContainer_la_SOURCES = \
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| 111 | Fragmentation/KeySetsContainer.cpp \
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| 112 | Fragmentation/parseKeySetFile.cpp
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[fe0355] | 113 | libMolecuilderFragmentation_getFromKeyset_la_SOURCES = \
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| 114 | Fragmentation/Homology/HomologyGraph_getFromKeyset.cpp
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| 115 | libMolecuilderFragmentation_getFromKeysetStub_la_SOURCES = \
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| 116 | Fragmentation/Homology/HomologyGraph_getFromKeysetStub.cpp
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[a9b86d] | 117 |
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| 118 | ## Instruct libtool to include ABI version information in the generated shared
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| 119 | ## library file (.so). The library ABI version is defined in configure.ac, so
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| 120 | ## that all version information is kept in one place.
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[53ef0d4] | 121 | libMolecuilderFragmentation_KeysetsContainer_la_LDFLAGS = $(AM_LDFLAGS) -version-info $(MOLECUILDER_SO_VERSION)
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[a9b86d] | 122 |
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| 123 | ## The generated configuration header is installed in its own subdirectory of
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| 124 | ## $(libdir). The reason for this is that the configuration information put
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| 125 | ## into this header file describes the target platform the installed library
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| 126 | ## has been built for. Thus the file must not be installed into a location
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| 127 | ## intended for architecture-independent files, as defined by the Filesystem
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| 128 | ## Hierarchy Standard (FHS).
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| 129 | ## The nodist_ prefix instructs Automake to not generate rules for including
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| 130 | ## the listed files in the distribution on 'make dist'. Files that are listed
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| 131 | ## in _HEADERS variables are normally included in the distribution, but the
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| 132 | ## configuration header file is generated at configure time and should not be
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| 133 | ## shipped with the source tarball.
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[fbf143] | 134 | libMolecuilderFragmentation_KeysetsContainer_libincludedir = $(libdir)/MoleCuilder/include
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| 135 | nodist_libMolecuilderFragmentation_KeysetsContainer_libinclude_HEADERS = $(top_builddir)/libmolecuilder_config.h
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