Action_Thermostats
Add_AtomRandomPerturbation
Add_FitFragmentPartialChargesAction
Add_RotateAroundBondAction
Add_SelectAtomByNameAction
Added_ParseSaveFragmentResults
AddingActions_SaveParseParticleParameters
Adding_Graph_to_ChangeBondActions
Adding_MD_integration_tests
Adding_ParticleName_to_Atom
Adding_StructOpt_integration_tests
AtomFragments
Automaking_mpqc_open
AutomationFragmentation_failures
Candidate_v1.5.4
Candidate_v1.6.0
Candidate_v1.6.1
Candidate_v1.7.0
ChangeBugEmailaddress
ChangingTestPorts
ChemicalSpaceEvaluator
CombiningParticlePotentialParsing
Combining_Subpackages
Debian_Package_split
Debian_package_split_molecuildergui_only
Disabling_MemDebug
Docu_Python_wait
EmpiricalPotential_contain_HomologyGraph
EmpiricalPotential_contain_HomologyGraph_documentation
Enable_parallel_make_install
Enhance_userguide
Enhanced_StructuralOptimization
Enhanced_StructuralOptimization_continued
Example_ManyWaysToTranslateAtom
Exclude_Hydrogens_annealWithBondGraph
FitPartialCharges_GlobalError
Fix_BoundInBox_CenterInBox_MoleculeActions
Fix_ChargeSampling_PBC
Fix_ChronosMutex
Fix_FitPartialCharges
Fix_FitPotential_needs_atomicnumbers
Fix_ForceAnnealing
Fix_IndependentFragmentGrids
Fix_ParseParticles
Fix_ParseParticles_split_forward_backward_Actions
Fix_PopActions
Fix_QtFragmentList_sorted_selection
Fix_Restrictedkeyset_FragmentMolecule
Fix_StatusMsg
Fix_StepWorldTime_single_argument
Fix_Verbose_Codepatterns
Fix_fitting_potentials
Fixes
ForceAnnealing_goodresults
ForceAnnealing_oldresults
ForceAnnealing_tocheck
ForceAnnealing_with_BondGraph
ForceAnnealing_with_BondGraph_continued
ForceAnnealing_with_BondGraph_continued_betteresults
ForceAnnealing_with_BondGraph_contraction-expansion
FragmentAction_writes_AtomFragments
FragmentMolecule_checks_bonddegrees
GeometryObjects
Gui_Fixes
Gui_displays_atomic_force_velocity
ImplicitCharges
IndependentFragmentGrids
IndependentFragmentGrids_IndividualZeroInstances
IndependentFragmentGrids_IntegrationTest
IndependentFragmentGrids_Sole_NN_Calculation
JobMarket_RobustOnKillsSegFaults
JobMarket_StableWorkerPool
JobMarket_unresolvable_hostname_fix
MoreRobust_FragmentAutomation
ODR_violation_mpqc_open
PartialCharges_OrthogonalSummation
PdbParser_setsAtomName
PythonUI_with_named_parameters
QtGui_reactivate_TimeChanged_changes
Recreated_GuiChecks
Rewrite_FitPartialCharges
RotateToPrincipalAxisSystem_UndoRedo
SaturateAtoms_findBestMatching
SaturateAtoms_singleDegree
StoppableMakroAction
Subpackage_CodePatterns
Subpackage_JobMarket
Subpackage_LinearAlgebra
Subpackage_levmar
Subpackage_mpqc_open
Subpackage_vmg
Switchable_LogView
ThirdParty_MPQC_rebuilt_buildsystem
TrajectoryDependenant_MaxOrder
TremoloParser_IncreasedPrecision
TremoloParser_MultipleTimesteps
TremoloParser_setsAtomName
Ubuntu_1604_changes
stable
|
Last change
on this file since 50d095 was d920b9, checked in by Frederik Heber <heber@…>, 13 years ago |
|
Abstracted FragmentJob and introduced SystemCommandJob which has its former functionality.
- FragmentJob now has just virtual function Work(), not implemented.
- former command and outputfile is taken over by SystemCommandJob.
- a FragmentJob or derived class is default cstor'ed always with
JobId::IllegalJob.
- so far SystemCommandJob captures command's stdout and parses it back from
file. We use mkstemps() for creating a random file and popen() to pipe stdout
directly. For this we require boost::iostreams and ::filesystem.
- SystemCommandJob has virtual method extractString() to be adaptable to the
output of various system commands.
- changes almost everywhere due to SystemCommandJob taking place of
FragmentJob and FragmentJob::ptr and FragmentResult::ptr requirements.
- added FragmentWorker::dummyInit() to enforce binding of the executable to
all possible derived FragmentJob's.
- added unit test for SystemCommandJob.
- added FragmentJobStub that implements a no-brainer job for testing.
- NOTE: boost::iostreams is incompatible with MemDebug due to placement new.
|
-
Property mode
set to
100644
|
|
File size:
971 bytes
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| Rev | Line | |
|---|
| [d920b9] | 1 | /*
|
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| 2 | * SystemCommandJobUnitTest.hpp
|
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| 3 | *
|
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| 4 | * Created on: Oct 23, 2011
|
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| 5 | * Author: heber
|
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| 6 | */
|
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| 7 |
|
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| 8 | #ifndef SYSTEMCOMMANDJOBUNITTEST_HPP_
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| 9 | #define SYSTEMCOMMANDJOBUNITTEST_HPP_
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| 10 |
|
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| 11 | // include config.h
|
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| 12 | #ifdef HAVE_CONFIG_H
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| 13 | #include <config.h>
|
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| 14 | #endif
|
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| 15 |
|
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| 16 | #include <string>
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| 17 |
|
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| 18 | #include <cppunit/extensions/HelperMacros.h>
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| 19 |
|
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| 20 | /********************************************** Test classes **************************************/
|
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| 21 |
|
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| 22 | class SystemCommandJobTest : public CppUnit::TestFixture
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| 23 | {
|
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| 24 | CPPUNIT_TEST_SUITE( SystemCommandJobTest) ;
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| 25 | CPPUNIT_TEST ( equalityTest );
|
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| 26 | CPPUNIT_TEST ( serializationTest );
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| 27 | CPPUNIT_TEST ( WorkTest );
|
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| 28 | CPPUNIT_TEST ( extractStringTest );
|
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| 29 | CPPUNIT_TEST_SUITE_END();
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| 30 |
|
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| 31 | public:
|
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| 32 | void setUp();
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| 33 | void tearDown();
|
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| 34 | void equalityTest();
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| 35 | void serializationTest();
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| 36 | void WorkTest();
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| 37 | void extractStringTest();
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| 38 |
|
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| 39 | private:
|
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| 40 | std::string command;
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| 41 | std::string outputfile;
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| 42 |
|
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| 43 | };
|
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| 44 |
|
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| 45 | #endif /* SYSTEMCOMMANDJOBUNITTEST_HPP_ */
|
|---|
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