source: src/Descriptors/MoleculeOrderDescriptor.cpp@ 50e4e5

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Last change on this file since 50e4e5 was 170ba6, checked in by Frederik Heber <heber@…>, 14 years ago

BUGFIX: MoleculeOrderDescription was not working in reverse because of bug in ObservedContainer.

  • we now require v1.0.9 of Codepatterns where bug in ObservedContainer is fixed.
  • TEST: added regression test Selection/Molecules/MoleculeByOrder with separate forward and backward test.
  • TEST: split up Selection/testsuite file into one on atoms, the other on molecules.
  • Property mode set to 100644
File size: 1.8 KB
Line 
1/*
2 * Project: MoleCuilder
3 * Description: creates and alters molecular systems
4 * Copyright (C) 2010 University of Bonn. All rights reserved.
5 * Please see the LICENSE file or "Copyright notice" in builder.cpp for details.
6 */
7
8/*
9 * MoleculeOrderDescriptor.cpp
10 *
11 * Created on: Dec 7, 2010
12 * Author: heber
13 */
14
15// include config.h
16#ifdef HAVE_CONFIG_H
17#include <config.h>
18#endif
19
20#include "CodePatterns/MemDebug.hpp"
21
22#include "MoleculeOrderDescriptor.hpp"
23#include "MoleculeOrderDescriptor_impl.hpp"
24
25#include "molecule.hpp"
26
27using namespace std;
28
29
30MoleculeOrderDescriptor_impl::MoleculeOrderDescriptor_impl(int _id) :
31 id(_id)
32{}
33
34MoleculeOrderDescriptor_impl::~MoleculeOrderDescriptor_impl()
35{}
36
37bool MoleculeOrderDescriptor_impl::predicate(std::pair<moleculeId_t,molecule*> _molecule)
38{
39 molecule *mol = find();
40 return (mol == _molecule.second);
41}
42
43MoleculeDescriptor MoleculeByOrder(int id){
44 return MoleculeDescriptor(MoleculeDescriptor::impl_ptr(new MoleculeOrderDescriptor_impl(id)));
45}
46
47molecule *MoleculeOrderDescriptor_impl::find(){
48 World::MoleculeSet &molecules = getMolecules();
49
50 int i=0;
51 molecule *mol = NULL;
52 if (id == 0) {
53 return NULL;
54 } else if (id > 0) {
55 World::MoleculeSet::const_iterator res = molecules.begin();
56 for (; res != molecules.end(); ++res) { // when iterator is normal, ++ goes forward!
57 ++i;
58 if (id == i)
59 break;
60 }
61 mol = res->second;
62 } else {
63 World::MoleculeSet::const_reverse_iterator res = molecules.rbegin();
64 for (; res != molecules.rend(); --res) { // when iterator is reverse, ++ goes backward!
65 --i;
66 if (id == i)
67 break;
68 }
69 mol = res->second;
70 }
71
72 return mol;
73}
74
75vector<molecule*> MoleculeOrderDescriptor_impl::findAll(){
76 molecule *res = find();
77 return (res)?(vector<molecule*>(1,res)):(vector<molecule*>());
78}
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