| 1 | /* | 
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| 2 | * Project: MoleCuilder | 
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| 3 | * Description: creates and alters molecular systems | 
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| 4 | * Copyright (C)  2010-2012 University of Bonn. All rights reserved. | 
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| 5 | * | 
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| 6 | * | 
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| 7 | *   This file is part of MoleCuilder. | 
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| 8 | * | 
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| 9 | *    MoleCuilder is free software: you can redistribute it and/or modify | 
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| 10 | *    it under the terms of the GNU General Public License as published by | 
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| 11 | *    the Free Software Foundation, either version 2 of the License, or | 
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| 12 | *    (at your option) any later version. | 
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| 13 | * | 
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| 14 | *    MoleCuilder is distributed in the hope that it will be useful, | 
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| 15 | *    but WITHOUT ANY WARRANTY; without even the implied warranty of | 
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| 16 | *    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | 
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| 17 | *    GNU General Public License for more details. | 
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| 18 | * | 
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| 19 | *    You should have received a copy of the GNU General Public License | 
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| 20 | *    along with MoleCuilder.  If not, see <http://www.gnu.org/licenses/>. | 
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| 21 | */ | 
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| 22 |  | 
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| 23 | /* | 
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| 24 | * MoleculeOrderDescriptor.cpp | 
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| 25 | * | 
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| 26 | *  Created on: Dec 7, 2010 | 
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| 27 | *      Author: heber | 
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| 28 | */ | 
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| 29 |  | 
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| 30 | // include config.h | 
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| 31 | #ifdef HAVE_CONFIG_H | 
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| 32 | #include <config.h> | 
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| 33 | #endif | 
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| 34 |  | 
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| 35 | #include "CodePatterns/MemDebug.hpp" | 
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| 36 |  | 
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| 37 | #include "MoleculeOrderDescriptor.hpp" | 
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| 38 | #include "MoleculeOrderDescriptor_impl.hpp" | 
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| 39 |  | 
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| 40 | #include "molecule.hpp" | 
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| 41 |  | 
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| 42 | using namespace std; | 
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| 43 |  | 
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| 44 |  | 
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| 45 | MoleculeOrderDescriptor_impl::MoleculeOrderDescriptor_impl(int _id) : | 
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| 46 | id(_id) | 
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| 47 | {} | 
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| 48 |  | 
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| 49 | MoleculeOrderDescriptor_impl::~MoleculeOrderDescriptor_impl() | 
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| 50 | {} | 
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| 51 |  | 
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| 52 | bool MoleculeOrderDescriptor_impl::predicate(std::pair<moleculeId_t,molecule*> _molecule) | 
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| 53 | { | 
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| 54 | molecule *mol = find(); | 
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| 55 | return (mol == _molecule.second); | 
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| 56 | } | 
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| 57 |  | 
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| 58 | MoleculeDescriptor MoleculeByOrder(int id){ | 
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| 59 | return MoleculeDescriptor(MoleculeDescriptor::impl_ptr(new MoleculeOrderDescriptor_impl(id))); | 
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| 60 | } | 
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| 61 |  | 
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| 62 | World::MoleculeSet& MoleculeOrderDescriptor_impl::getMolecules() | 
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| 63 | { | 
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| 64 | return World::getInstance().molecules; | 
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| 65 | } | 
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| 66 |  | 
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| 67 | molecule* MoleculeOrderDescriptor_impl::find() { | 
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| 68 | World::MoleculeSet &molecules = getMolecules(); | 
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| 69 |  | 
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| 70 | int i=0; | 
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| 71 | molecule *mol = NULL; | 
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| 72 | if (id == 0) { | 
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| 73 | return NULL; | 
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| 74 | } else if (id > 0) { | 
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| 75 | World::MoleculeSet::internal_iterator res = molecules.begin_internal(); | 
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| 76 | for (; res != molecules.end_internal(); ++res) { // when iterator is normal, ++ goes forward! | 
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| 77 | ++i; | 
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| 78 | if (id == i) { | 
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| 79 | mol = res->second; | 
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| 80 | break; | 
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| 81 | } | 
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| 82 | } | 
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| 83 | } else { | 
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| 84 | World::MoleculeSet::reverse_internal_iterator res = molecules.rbegin_internal(); | 
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| 85 | for (; res != molecules.rend_internal(); ++res) {  // when iterator is reverse, ++ goes backward! | 
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| 86 | --i; | 
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| 87 | if (id == i) { | 
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| 88 | mol = res->second; | 
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| 89 | break; | 
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| 90 | } | 
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| 91 | } | 
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| 92 | } | 
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| 93 |  | 
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| 94 | return mol; | 
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| 95 | } | 
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| 96 |  | 
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| 97 | vector<molecule*> MoleculeOrderDescriptor_impl::findAll(){ | 
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| 98 | molecule *res = find(); | 
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| 99 | return (res)?(vector<molecule*>(1,res)):(vector<molecule*>()); | 
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| 100 | } | 
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