[1c51c8] | 1 | /*
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| 2 | * MoleculeDescriptor.cpp
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| 3 | *
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| 4 | * Created on: Feb 5, 2010
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| 5 | * Author: crueger
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| 6 | */
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| 7 |
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[bf3817] | 8 | // include config.h
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| 9 | #ifdef HAVE_CONFIG_H
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| 10 | #include <config.h>
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| 11 | #endif
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| 12 |
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[112b09] | 13 | #include "Helpers/MemDebug.hpp"
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| 14 |
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[1c51c8] | 15 | #include "Descriptors/MoleculeDescriptor.hpp"
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| 16 | #include "Descriptors/MoleculeDescriptor_impl.hpp"
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| 17 |
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| 18 | #include "World.hpp"
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[51be2a] | 19 | #include "Patterns/ObservedContainer_impl.hpp"
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[1c51c8] | 20 |
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| 21 | #include "molecule.hpp"
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| 22 |
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| 23 | #include <boost/bind.hpp>
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| 24 | #include <iostream>
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| 25 |
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| 26 | using namespace std;
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| 27 |
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[51be2a] | 28 | typedef World::MoleculeSet::internal_iterator molecules_iter_t;
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[1c51c8] | 29 |
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| 30 | /************************ Forwarding object **************************************/
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| 31 |
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| 32 |
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| 33 | MoleculeDescriptor::MoleculeDescriptor(impl_ptr _impl) :
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| 34 | impl(_impl)
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| 35 | {}
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| 36 |
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| 37 | MoleculeDescriptor::MoleculeDescriptor(const MoleculeDescriptor& src) :
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| 38 | impl(src.get_impl())
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| 39 | {}
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| 40 |
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| 41 | MoleculeDescriptor::~MoleculeDescriptor()
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| 42 | {}
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| 43 |
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| 44 | MoleculeDescriptor& MoleculeDescriptor::operator=(MoleculeDescriptor &src){
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| 45 | if(&src!=this) {
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| 46 | impl=src.get_impl();
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| 47 | }
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| 48 | return *this;
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| 49 | }
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| 50 |
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| 51 | molecule* MoleculeDescriptor::find(){
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| 52 | return impl->find();
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| 53 | }
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| 54 |
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| 55 | std::vector<molecule*> MoleculeDescriptor::findAll(){
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| 56 | return impl->findAll();
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| 57 | }
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| 58 |
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| 59 | MoleculeDescriptor::impl_ptr MoleculeDescriptor::get_impl() const{
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| 60 | return impl;
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| 61 | }
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| 62 |
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| 63 |
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| 64 |
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| 65 |
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| 66 | /**************************** implementation ********************/
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| 67 |
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| 68 | MoleculeDescriptor_impl::MoleculeDescriptor_impl()
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| 69 | {
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| 70 | }
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| 71 |
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| 72 | MoleculeDescriptor_impl::~MoleculeDescriptor_impl()
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| 73 | {
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| 74 | }
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| 75 |
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| 76 | World::MoleculeSet& MoleculeDescriptor_impl::getMolecules(){
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[23b547] | 77 | return World::getInstance().molecules;
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[1c51c8] | 78 | }
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| 79 |
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| 80 | molecule* MoleculeDescriptor_impl::find() {
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[a1e0b6] | 81 | World::MoleculeSet &molecules = getMolecules();
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[51be2a] | 82 | molecules_iter_t res = find_if(molecules.begin_internal(),molecules.end_internal(),boost::bind(&MoleculeDescriptor_impl::predicate,this,_1));
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| 83 | return (res!=molecules.end_internal())?((*res).second):0;
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[1c51c8] | 84 | }
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| 85 |
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| 86 | vector<molecule*> MoleculeDescriptor_impl::findAll() {
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| 87 | vector<molecule*> res;
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[a1e0b6] | 88 | World::MoleculeSet &molecules = getMolecules();
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[8cce2b] | 89 | for_each(molecules.begin_internal(),
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| 90 | molecules.end_internal(),
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| 91 | boost::bind(&MoleculeDescriptor_impl::checkAndAdd,
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| 92 | this,&res,_1));
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[1c51c8] | 93 | return res;
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| 94 | }
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| 95 |
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[8cce2b] | 96 | void MoleculeDescriptor_impl::checkAndAdd(std::vector<molecule*> *v,std::pair<moleculeId_t,molecule*> p){
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| 97 | if(predicate(p)){
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| 98 | v->push_back(p.second);
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| 99 | }
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| 100 | }
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| 101 |
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[1c51c8] | 102 | /************************** Universe and Emptyset *****************/
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| 103 |
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| 104 | MoleculeAllDescriptor_impl::MoleculeAllDescriptor_impl()
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| 105 | {}
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| 106 |
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| 107 | MoleculeAllDescriptor_impl::~MoleculeAllDescriptor_impl()
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| 108 | {}
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| 109 |
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| 110 | bool MoleculeAllDescriptor_impl::predicate(std::pair<moleculeId_t,molecule*>){
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| 111 | return true;
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| 112 | }
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| 113 |
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| 114 | MoleculeDescriptor AllMolecules(){
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| 115 | return MoleculeDescriptor(MoleculeDescriptor::impl_ptr(new MoleculeAllDescriptor_impl));
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| 116 | }
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| 117 |
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| 118 | MoleculeNoneDescriptor_impl::MoleculeNoneDescriptor_impl()
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| 119 | {}
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| 120 |
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| 121 | MoleculeNoneDescriptor_impl::~MoleculeNoneDescriptor_impl()
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| 122 | {}
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| 123 |
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| 124 | bool MoleculeNoneDescriptor_impl::predicate(std::pair<moleculeId_t,molecule*>){
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| 125 | return false;
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| 126 | }
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| 127 |
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| 128 | MoleculeDescriptor NoMolecules(){
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| 129 | return MoleculeDescriptor(MoleculeDescriptor::impl_ptr(new MoleculeNoneDescriptor_impl));
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| 130 | }
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| 131 |
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| 132 | /************************** Operator stuff ************************/
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| 133 |
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| 134 | // AND
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| 135 | MoleculeAndDescriptor_impl::MoleculeAndDescriptor_impl(MoleculeDescriptor::impl_ptr _lhs, MoleculeDescriptor::impl_ptr _rhs) :
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| 136 | lhs(_lhs), rhs(_rhs)
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| 137 | {}
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| 138 |
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| 139 | MoleculeAndDescriptor_impl::~MoleculeAndDescriptor_impl()
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| 140 | {}
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| 141 |
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| 142 | bool MoleculeAndDescriptor_impl::predicate(std::pair<moleculeId_t,molecule*> molecule){
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| 143 | return lhs->predicate(molecule) && rhs->predicate(molecule);
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| 144 | }
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| 145 | MoleculeDescriptor operator&&(const MoleculeDescriptor &lhs, const MoleculeDescriptor &rhs){
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| 146 | MoleculeDescriptor::impl_ptr newImpl = MoleculeDescriptor::impl_ptr(new MoleculeAndDescriptor_impl(lhs.get_impl(),rhs.get_impl()));
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| 147 | return MoleculeDescriptor(newImpl);
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| 148 | }
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| 149 |
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| 150 | // OR
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| 151 | MoleculeOrDescriptor_impl::MoleculeOrDescriptor_impl(MoleculeDescriptor::impl_ptr _lhs ,MoleculeDescriptor::impl_ptr _rhs) :
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| 152 | lhs(_lhs), rhs(_rhs)
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| 153 | {}
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| 154 |
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| 155 | MoleculeOrDescriptor_impl::~MoleculeOrDescriptor_impl(){
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| 156 | }
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| 157 |
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| 158 | bool MoleculeOrDescriptor_impl::predicate(std::pair<moleculeId_t,molecule*> molecule){
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| 159 | return lhs->predicate(molecule) || rhs->predicate(molecule);
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| 160 | }
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| 161 |
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| 162 | MoleculeDescriptor operator||(const MoleculeDescriptor &lhs, const MoleculeDescriptor &rhs){
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| 163 | MoleculeDescriptor::impl_ptr newImpl = MoleculeDescriptor::impl_ptr(new MoleculeOrDescriptor_impl(lhs.get_impl(),rhs.get_impl()));
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| 164 | return MoleculeDescriptor(newImpl);
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| 165 | }
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| 166 |
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| 167 | // NOT
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| 168 |
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| 169 | MoleculeNotDescriptor_impl::MoleculeNotDescriptor_impl(MoleculeDescriptor::impl_ptr _arg) :
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| 170 | arg(_arg)
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| 171 | {}
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| 172 |
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| 173 |
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| 174 | MoleculeNotDescriptor_impl::~MoleculeNotDescriptor_impl()
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| 175 | {
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| 176 | }
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| 177 |
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| 178 | bool MoleculeNotDescriptor_impl::predicate(std::pair<moleculeId_t,molecule*> molecule){
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| 179 | return !(arg->predicate(molecule));
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| 180 | }
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| 181 |
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| 182 | MoleculeDescriptor operator!(const MoleculeDescriptor &arg){
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| 183 | MoleculeDescriptor::impl_ptr newImpl = MoleculeDescriptor::impl_ptr(new MoleculeNotDescriptor_impl(arg.get_impl()));
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| 184 | return MoleculeDescriptor(newImpl);
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| 185 | }
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