| [bcf653] | 1 | /*
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| 2 | * Project: MoleCuilder
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| 3 | * Description: creates and alters molecular systems
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| [0aa122] | 4 | * Copyright (C) 2010-2012 University of Bonn. All rights reserved.
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| [94d5ac6] | 5 | *
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| 6 | *
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| 7 | * This file is part of MoleCuilder.
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| 8 | *
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| 9 | * MoleCuilder is free software: you can redistribute it and/or modify
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| 10 | * it under the terms of the GNU General Public License as published by
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| 11 | * the Free Software Foundation, either version 2 of the License, or
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| 12 | * (at your option) any later version.
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| 13 | *
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| 14 | * MoleCuilder is distributed in the hope that it will be useful,
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| 15 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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| 16 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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| 17 | * GNU General Public License for more details.
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| 18 | *
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| 19 | * You should have received a copy of the GNU General Public License
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| 20 | * along with MoleCuilder. If not, see <http://www.gnu.org/licenses/>.
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| [bcf653] | 21 | */
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| 22 |
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| [fc1b24] | 23 | /*
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| 24 | * AtomDescriptor.cpp
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| 25 | *
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| 26 | * Created on: Feb 5, 2010
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| 27 | * Author: crueger
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| 28 | */
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| 29 |
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| [bf3817] | 30 | // include config.h
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| 31 | #ifdef HAVE_CONFIG_H
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| 32 | #include <config.h>
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| 33 | #endif
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| 34 |
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| [ad011c] | 35 | #include "CodePatterns/MemDebug.hpp"
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| [112b09] | 36 |
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| [7a1ce5] | 37 | #include "Descriptors/AtomDescriptor.hpp"
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| 38 | #include "Descriptors/AtomDescriptor_impl.hpp"
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| [fc1b24] | 39 |
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| 40 | #include "World.hpp"
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| [6f0841] | 41 | #include "Atom/atom.hpp"
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| [02ce36] | 42 | #include "CodePatterns/Observer/ObservedContainer_impl.hpp"
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| [7a1ce5] | 43 |
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| [fc1b24] | 44 | #include <boost/bind.hpp>
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| [6d574a] | 45 |
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| [7a1ce5] | 46 | #include <iostream>
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| [fc1b24] | 47 |
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| 48 | using namespace std;
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| 49 |
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| [4d7462] | 50 | typedef World::AtomSet::internal_iterator atoms_iter_t;
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| [fc1b24] | 51 |
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| [7a1ce5] | 52 | /************************ Forwarding object **************************************/
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| 53 |
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| 54 |
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| 55 | AtomDescriptor::AtomDescriptor(impl_ptr _impl) :
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| 56 | impl(_impl)
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| 57 | {}
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| 58 |
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| 59 | AtomDescriptor::AtomDescriptor(const AtomDescriptor& src) :
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| 60 | impl(src.get_impl())
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| 61 | {}
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| 62 |
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| 63 | AtomDescriptor::~AtomDescriptor()
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| 64 | {}
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| 65 |
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| 66 | AtomDescriptor& AtomDescriptor::operator=(AtomDescriptor &src){
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| 67 | if(&src!=this) {
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| 68 | impl=src.get_impl();
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| 69 | }
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| 70 | return *this;
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| [fc1b24] | 71 | }
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| 72 |
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| [7a1ce5] | 73 | atom* AtomDescriptor::find(){
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| 74 | return impl->find();
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| [d1c5e2] | 75 | }
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| 76 |
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| [7a1ce5] | 77 | std::vector<atom*> AtomDescriptor::findAll(){
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| 78 | return impl->findAll();
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| 79 | }
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| 80 |
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| 81 | AtomDescriptor::impl_ptr AtomDescriptor::get_impl() const{
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| 82 | return impl;
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| 83 | }
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| 84 |
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| 85 |
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| 86 |
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| 87 |
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| 88 | /**************************** implementation ********************/
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| 89 |
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| 90 | AtomDescriptor_impl::AtomDescriptor_impl()
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| [fc1b24] | 91 | {
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| 92 | }
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| 93 |
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| [7a1ce5] | 94 | AtomDescriptor_impl::~AtomDescriptor_impl()
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| 95 | {
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| 96 | }
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| [fc1b24] | 97 |
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| [7042f45] | 98 | World::AtomSet& AtomDescriptor_impl::getAtoms(){
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| [23b547] | 99 | return World::getInstance().atoms;
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| [fc1b24] | 100 | }
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| 101 |
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| [7a1ce5] | 102 | atom* AtomDescriptor_impl::find() {
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| [4d7462] | 103 | World::AtomSet &atoms = getAtoms();
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| 104 | atoms_iter_t res = find_if(atoms.begin_internal(),atoms.end_internal(),boost::bind(&AtomDescriptor_impl::predicate,this,_1));
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| 105 | return (res!=atoms.end_internal())?((*res).second):0;
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| [fc1b24] | 106 | }
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| 107 |
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| [7a1ce5] | 108 | vector<atom*> AtomDescriptor_impl::findAll() {
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| [fc1b24] | 109 | vector<atom*> res;
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| [7042f45] | 110 | World::AtomSet atoms = getAtoms();
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| [8cce2b] | 111 | for_each(atoms.begin_internal(),
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| 112 | atoms.end_internal(),
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| 113 | boost::bind(&AtomDescriptor_impl::checkAndAdd,
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| 114 | this,&res,_1));
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| [7a1ce5] | 115 | return res;
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| [fc1b24] | 116 | }
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| [d1c5e2] | 117 |
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| [8cce2b] | 118 | void AtomDescriptor_impl::checkAndAdd(std::vector<atom*> *v,std::pair<atomId_t,atom*> p){
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| 119 | if(predicate(p)){
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| 120 | v->push_back(p.second);
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| 121 | }
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| 122 | }
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| 123 |
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| [7a1ce5] | 124 | /************************** Universe and Emptyset *****************/
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| [d1c5e2] | 125 |
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| [7a1ce5] | 126 | AtomAllDescriptor_impl::AtomAllDescriptor_impl()
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| 127 | {}
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| [d1c5e2] | 128 |
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| [7a1ce5] | 129 | AtomAllDescriptor_impl::~AtomAllDescriptor_impl()
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| 130 | {}
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| [d1c5e2] | 131 |
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| [24a5e0] | 132 | bool AtomAllDescriptor_impl::predicate(std::pair<atomId_t,atom*>){
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| [7a1ce5] | 133 | return true;
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| [d1c5e2] | 134 | }
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| 135 |
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| [7a1ce5] | 136 | AtomDescriptor AllAtoms(){
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| 137 | return AtomDescriptor(AtomDescriptor::impl_ptr(new AtomAllDescriptor_impl));
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| [d1c5e2] | 138 | }
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| 139 |
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| [7a1ce5] | 140 | AtomNoneDescriptor_impl::AtomNoneDescriptor_impl()
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| 141 | {}
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| 142 |
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| 143 | AtomNoneDescriptor_impl::~AtomNoneDescriptor_impl()
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| 144 | {}
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| 145 |
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| [24a5e0] | 146 | bool AtomNoneDescriptor_impl::predicate(std::pair<atomId_t,atom*>){
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| [7a1ce5] | 147 | return false;
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| [d1c5e2] | 148 | }
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| 149 |
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| [7a1ce5] | 150 | AtomDescriptor NoAtoms(){
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| 151 | return AtomDescriptor(AtomDescriptor::impl_ptr(new AtomNoneDescriptor_impl));
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| [d1c5e2] | 152 | }
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| 153 |
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| [7a1ce5] | 154 | /************************** Operator stuff ************************/
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| [d1c5e2] | 155 |
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| [7a1ce5] | 156 | // AND
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| 157 | AtomAndDescriptor_impl::AtomAndDescriptor_impl(AtomDescriptor::impl_ptr _lhs, AtomDescriptor::impl_ptr _rhs) :
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| 158 | lhs(_lhs), rhs(_rhs)
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| 159 | {}
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| [d1c5e2] | 160 |
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| [7a1ce5] | 161 | AtomAndDescriptor_impl::~AtomAndDescriptor_impl()
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| 162 | {}
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| [d1c5e2] | 163 |
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| [24a5e0] | 164 | bool AtomAndDescriptor_impl::predicate(std::pair<atomId_t,atom*> atom){
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| [7a1ce5] | 165 | return lhs->predicate(atom) && rhs->predicate(atom);
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| 166 | }
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| 167 | AtomDescriptor operator&&(const AtomDescriptor &lhs, const AtomDescriptor &rhs){
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| 168 | AtomDescriptor::impl_ptr newImpl = AtomDescriptor::impl_ptr(new AtomAndDescriptor_impl(lhs.get_impl(),rhs.get_impl()));
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| 169 | return AtomDescriptor(newImpl);
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| [d1c5e2] | 170 | }
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| 171 |
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| [7a1ce5] | 172 | // OR
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| 173 | AtomOrDescriptor_impl::AtomOrDescriptor_impl(AtomDescriptor::impl_ptr _lhs ,AtomDescriptor::impl_ptr _rhs) :
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| 174 | lhs(_lhs), rhs(_rhs)
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| 175 | {}
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| 176 |
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| 177 | AtomOrDescriptor_impl::~AtomOrDescriptor_impl(){
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| [d1c5e2] | 178 | }
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| 179 |
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| [24a5e0] | 180 | bool AtomOrDescriptor_impl::predicate(std::pair<atomId_t,atom*> atom){
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| [7a1ce5] | 181 | return lhs->predicate(atom) || rhs->predicate(atom);
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| [d1c5e2] | 182 | }
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| 183 |
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| [7a1ce5] | 184 | AtomDescriptor operator||(const AtomDescriptor &lhs, const AtomDescriptor &rhs){
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| 185 | AtomDescriptor::impl_ptr newImpl = AtomDescriptor::impl_ptr(new AtomOrDescriptor_impl(lhs.get_impl(),rhs.get_impl()));
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| 186 | return AtomDescriptor(newImpl);
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| [d1c5e2] | 187 | }
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| 188 |
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| 189 | // NOT
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| 190 |
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| [7a1ce5] | 191 | AtomNotDescriptor_impl::AtomNotDescriptor_impl(AtomDescriptor::impl_ptr _arg) :
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| 192 | arg(_arg)
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| 193 | {}
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| [d1c5e2] | 194 |
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| 195 |
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| [7a1ce5] | 196 | AtomNotDescriptor_impl::~AtomNotDescriptor_impl()
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| [d1c5e2] | 197 | {
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| 198 | }
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| 199 |
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| [24a5e0] | 200 | bool AtomNotDescriptor_impl::predicate(std::pair<atomId_t,atom*> atom){
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| [d1c5e2] | 201 | return !(arg->predicate(atom));
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| 202 | }
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| 203 |
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| [7a1ce5] | 204 | AtomDescriptor operator!(const AtomDescriptor &arg){
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| 205 | AtomDescriptor::impl_ptr newImpl = AtomDescriptor::impl_ptr(new AtomNotDescriptor_impl(arg.get_impl()));
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| 206 | return AtomDescriptor(newImpl);
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| [d1c5e2] | 207 | }
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