| 1 | /* | 
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| 2 | * Box.hpp | 
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| 3 | * | 
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| 4 | *  Created on: Jun 30, 2010 | 
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| 5 | *      Author: crueger | 
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| 6 | */ | 
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| 7 |  | 
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| 8 | #ifndef BOX_HPP_ | 
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| 9 | #define BOX_HPP_ | 
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| 10 |  | 
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| 11 | class Matrix; | 
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| 12 | class Vector; | 
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| 13 |  | 
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| 14 | #include <list> | 
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| 15 | #include "VectorSet.hpp" | 
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| 16 |  | 
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| 17 | /** | 
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| 18 | * A simple class that can be used to store periodic Boxes | 
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| 19 | * in the form of a parallelepiped. | 
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| 20 | * | 
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| 21 | * Stores a matrix that can be used to translate from periodic | 
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| 22 | * [0,1) space as well as the inverse that is needed to | 
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| 23 | * translate back to that space. | 
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| 24 | */ | 
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| 25 | class Box | 
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| 26 | { | 
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| 27 | public: | 
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| 28 | Box(); | 
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| 29 | Box(const Box&); | 
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| 30 | virtual ~Box(); | 
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| 31 |  | 
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| 32 | /** | 
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| 33 | * Get the matrix describing the form of the parallelepiped | 
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| 34 | */ | 
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| 35 | const Matrix &getM() const; | 
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| 36 |  | 
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| 37 | /** | 
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| 38 | * Get the inverse of the matrix M (see above). | 
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| 39 | */ | 
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| 40 | const Matrix &getMinv() const; | 
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| 41 |  | 
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| 42 | /** | 
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| 43 | * Set the form of the parallelepiped. | 
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| 44 | */ | 
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| 45 | void setM(Matrix); | 
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| 46 |  | 
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| 47 | Box &operator=(const Box&); | 
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| 48 | Box &operator=(const Matrix&); | 
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| 49 |  | 
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| 50 | /** | 
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| 51 | * Translate a point from [0,1) to the boxed space. | 
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| 52 | */ | 
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| 53 | Vector translateIn(const Vector &point) const; | 
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| 54 |  | 
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| 55 | /** | 
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| 56 | * Translate a point from the boxed space to the [0,1) space. | 
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| 57 | */ | 
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| 58 | Vector translateOut(const Vector &point) const; | 
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| 59 |  | 
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| 60 | /** | 
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| 61 | * Wrap a point so that it will lie within the space defined by the box. | 
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| 62 | */ | 
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| 63 | Vector WrapPeriodically(const Vector &point) const; | 
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| 64 |  | 
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| 65 | /** | 
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| 66 | * Produce corresponding points in several adjacent boxes. | 
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| 67 | * | 
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| 68 | * n specifies the number of times the point is expanded. | 
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| 69 | * Carefull, needs O(n^3) time and produces as many vectors. | 
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| 70 | */ | 
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| 71 | VECTORSET(std::list) explode(const Vector &point,int n) const; | 
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| 72 | VECTORSET(std::list) explode(const Vector &point) const; | 
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| 73 |  | 
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| 74 | /** | 
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| 75 | * Calculate the distance of two points in the periodic space | 
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| 76 | * defined by this box | 
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| 77 | */ | 
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| 78 | double periodicDistanceSquared(const Vector &point1,const Vector &point2) const; | 
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| 79 |  | 
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| 80 | /** | 
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| 81 | * Calculate the distance of two points in the periodic space | 
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| 82 | * defined by this box | 
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| 83 | */ | 
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| 84 | double periodicDistance(const Vector &point1,const Vector &point2) const; | 
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| 85 |  | 
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| 86 | private: | 
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| 87 | Matrix *M;    //!< Defines the layout of the box | 
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| 88 | Matrix *Minv; //!< Inverse of M to avoid recomputation | 
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| 89 | }; | 
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| 90 |  | 
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| 91 | #endif /* BOX_HPP_ */ | 
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