1 | /*
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2 | * Box.hpp
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3 | *
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4 | * Created on: Jun 30, 2010
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5 | * Author: crueger
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6 | */
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7 |
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8 | #ifndef BOX_HPP_
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9 | #define BOX_HPP_
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10 |
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11 | // include config.h
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12 | #ifdef HAVE_CONFIG_H
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13 | #include <config.h>
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14 | #endif
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15 |
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16 |
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17 | class RealSpaceMatrix;
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18 | class Vector;
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19 | class Shape;
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20 | class Plane;
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21 |
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22 | #include <list>
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23 | #include <vector>
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24 | #include "LinearAlgebra/VectorSet.hpp"
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25 |
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26 | /**
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27 | * A simple class that can be used to store periodic Boxes
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28 | * in the form of a parallelepiped.
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29 | *
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30 | * Stores a matrix that can be used to translate from periodic
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31 | * [0,1) space as well as the inverse that is needed to
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32 | * translate back to that space.
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33 | */
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34 | class Box
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35 | {
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36 | public:
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37 | typedef enum{
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38 | Wrap,
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39 | Bounce,
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40 | Ignore
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41 | } BoundaryCondition_t;
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42 |
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43 | typedef std::vector<BoundaryCondition_t> Conditions_t;
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44 |
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45 | Box();
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46 | Box(const Box&);
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47 | Box(RealSpaceMatrix _M);
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48 | virtual ~Box();
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49 |
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50 | /**
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51 | * Get the matrix describing the form of the parallelepiped
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52 | */
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53 | const RealSpaceMatrix &getM() const;
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54 |
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55 | /**
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56 | * Get the inverse of the matrix M (see above).
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57 | */
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58 | const RealSpaceMatrix &getMinv() const;
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59 |
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60 | /**
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61 | * Set the form of the parallelepiped.
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62 | */
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63 | void setM(RealSpaceMatrix);
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64 |
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65 | Box &operator=(const Box&);
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66 | Box &operator=(const RealSpaceMatrix&);
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67 |
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68 | /**
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69 | * Translate a point from [0,1) to the boxed space.
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70 | */
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71 | Vector translateIn(const Vector &point) const;
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72 |
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73 | /**
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74 | * Translate a point from the boxed space to the [0,1) space.
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75 | */
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76 | Vector translateOut(const Vector &point) const;
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77 |
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78 | /**
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79 | * Wrap a point so that it will lie within the space defined by the box.
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80 | */
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81 | Vector WrapPeriodically(const Vector &point) const;
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82 |
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83 | /**
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84 | * Checks whether a given vector is inside the box.
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85 | */
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86 | bool isInside(const Vector &point) const;
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87 |
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88 | /**
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89 | * Produce corresponding points in several adjacent boxes.
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90 | *
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91 | * n specifies the number of times the point is expanded.
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92 | * Carefull, needs O(n^3) time and produces as many vectors.
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93 | */
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94 | VECTORSET(std::vector) explode(const Vector &point,int n) const;
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95 | VECTORSET(std::vector) explode(const Vector &point) const;
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96 |
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97 | /**
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98 | * Calculate the distance of two points in the periodic space
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99 | * defined by this box
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100 | */
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101 | double periodicDistanceSquared(const Vector &point1,const Vector &point2) const;
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102 |
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103 | /**
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104 | * Calculate the distance of two points in the periodic space
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105 | * defined by this box
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106 | */
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107 | double periodicDistance(const Vector &point1,const Vector &point2) const;
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108 |
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109 | /**
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110 | * Calculates the minimum distance to the boundary of the periodic
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111 | * space defined by this box.
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112 | */
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113 | double DistanceToBoundary(const Vector &point) const;
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114 |
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115 | Shape getShape() const;
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116 | const Conditions_t getConditions() const;
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117 | void setCondition(int,BoundaryCondition_t);
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118 |
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119 | const std::vector<std::pair<Plane,Plane> > getBoundingPlanes() const;
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120 |
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121 | void setCuboid(const Vector&);
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122 |
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123 | private:
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124 | /** Internal explode function that works on the staticly present internal_list
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125 | *
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126 | * \todo Note that is not thread-safe!
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127 | *
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128 | * Most of the time of explode is consumed by memory allocation if it is called
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129 | * repeatedly.
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130 | *
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131 | * @param point point to explode
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132 | * @param n neighbour shells to explode
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133 | */
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134 | void internal_explode(const Vector &point,int n) const;
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135 |
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136 | //!> Internal vector list for exploding vectors used in Box::internal_explode().
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137 | mutable VECTORSET(std::vector) internal_list;
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138 |
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139 | //!> Internal vector for coordinates used in Box::internal_explode()
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140 | mutable std::vector<int> coords;
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141 | //!> Internal vector for indices used in Box::internal_explode()
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142 | mutable std::vector<int> index;
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143 |
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144 | Conditions_t conditions;
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145 | RealSpaceMatrix *M; //!< Defines the layout of the box
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146 | RealSpaceMatrix *Minv; //!< Inverse of M to avoid recomputation
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147 | };
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148 |
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149 | std::ostream & operator << (std::ostream& ost, const Box &m);
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150 |
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151 | #endif /* BOX_HPP_ */
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