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              ../
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    AnalysisAction
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    99db9b
     
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    10 years
   | 
  FrederikHeber | 
  
    Replaced all World::getSelected...() to const version where possible.
 …
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    AtomAction
   | 
  
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    3dadd5
     
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    9 years
   | 
  FrederikHeber | 
  
    Revert "Removing SphericalPointDistribution::getSimplePolygon() to …
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    BondAction
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    1745b7
     
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    9 years
   | 
  FrederikHeber | 
  
    AddBondAction also sets a desired bond degree.
   | 
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    CommandAction
   | 
  
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    10aee4
     
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    10 years
   | 
  FrederikHeber | 
  
    Cleaned up ActionQueue's interface: Actions are always cloned.
- …
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    FillAction
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    42715d
     
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    9 years
   | 
  FrederikHeber | 
  
    WARNINGFIX: Removed AtomVector typedef in some Fill..Actions.
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    FragmentationAction
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    72b467
     
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    9 years
   | 
  FrederikHeber | 
  
    ParseFragmentResultsAction warns when parsing container with grids and …
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    GraphAction
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    2affd1
     
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    10 years
   | 
  FrederikHeber | 
  
    Removed molecules_deprecated from World and unnecessary includes of …
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    MoleculeAction
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    2affd1
     
   | 
  
    10 years
   | 
  FrederikHeber | 
  
    Removed molecules_deprecated from World and unnecessary includes of …
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    ParserAction
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    30e5dc
     
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    9 years
   | 
  FrederikHeber | 
  
    Removed ParseTremoloPotentialsAction.
- TESTFIX: removed regression …
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    PotentialAction
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    27e6a7
     
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    9 years
   | 
  FrederikHeber | 
  
    Enhanced verbosity of printed homologous graphs.
   | 
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    RandomNumbersAction
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    043598
     
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    10 years
   | 
  FrederikHeber | 
  
    Replaced all std::string by ParameterPair where used as ("key = …
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    SelectionAction
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    99db9b
     
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    10 years
   | 
  FrederikHeber | 
  
    Replaced all World::getSelected...() to const version where possible.
 …
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    ShapeAction
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    26b4d62
     
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    11 years
   | 
  FrederikHeber | 
  
    All Actions now give correct failure status via STATUS() macro.
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    TesselationAction
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    f01769
     
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    10 years
   | 
  FrederikHeber | 
  
    Replaced World::getAtom() wherever possible by const version.
- some …
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    unittests
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    10aee4
     
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    10 years
   | 
  FrederikHeber | 
  
    Cleaned up ActionQueue's interface: Actions are always cloned.
- …
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    WorldAction
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    2affd1
     
   | 
  
    10 years
   | 
  FrederikHeber | 
  
    Removed molecules_deprecated from World and unnecessary includes of …
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    Action.cpp
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    4.9 KB
    
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    94232b
     
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    10 years
   | 
  FrederikHeber | 
  
    Action::isActive() is now const member function.
- also changed …
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    Action.hpp
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    11.3 KB
    
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    10aee4
     
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    10 years
   | 
  FrederikHeber | 
  
    Cleaned up ActionQueue's interface: Actions are always cloned.
- …
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    Action_impl_header.hpp
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    9.2 KB
    
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    a82f61
     
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    10 years
   | 
  FrederikHeber | 
  
    Added Action::setOptionValue() which allows setting the option via a …
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    Action_impl_pre.hpp
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    14.8 KB
    
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    10aee4
     
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    10 years
   | 
  FrederikHeber | 
  
    Cleaned up ActionQueue's interface: Actions are always cloned.
- …
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    Action_impl_python.hpp
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    5.0 KB
    
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    0c74aa
     
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    11 years
   | 
  FrederikHeber | 
  
    FIX: Fixes to Action_impl_python, lacked boost preprocessor includes.
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    Action_impl_undef.hpp
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    463 bytes
    
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    649aaa
     
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    13 years
   | 
  FrederikHeber | 
  
    All Actions' .def files now have a paramvalids that is used to for …
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    ActionExceptions.hpp
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    864 bytes
    
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    e5c233
     
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    14 years
   | 
  FrederikHeber | 
  
    FIX: replaced boost/exception.hpp by boost/exception/all.hpp.
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    ActionHistory.cpp
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    2.8 KB
    
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    6367dd
     
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    12 years
   | 
  FrederikHeber | 
  
    ActionHistory now is part of ActionQueue.
- TESTFIX: changes to …
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    ActionHistory.hpp
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    1.2 KB
    
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    6367dd
     
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    12 years
   | 
  FrederikHeber | 
  
    ActionHistory now is part of ActionQueue.
- TESTFIX: changes to …
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    ActionParameters.hpp
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    622 bytes
    
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    b5b01e
     
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    12 years
   | 
  FrederikHeber | 
  
    ActionState extracted into own header file, rename Action::state_ptr …
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    ActionQueue.cpp
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    11.2 KB
    
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    574d377
     
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    10 years
   | 
  FrederikHeber | 
  
    Using static Observable::..NotificationsChannel() functions.
- …
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    ActionQueue.hpp
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    8.8 KB
    
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    10aee4
     
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    10 years
   | 
  FrederikHeber | 
  
    Cleaned up ActionQueue's interface: Actions are always cloned.
- …
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    ActionRegistry.cpp
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    7.9 KB
    
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    10aee4
     
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    10 years
   | 
  FrederikHeber | 
  
    Cleaned up ActionQueue's interface: Actions are always cloned.
- …
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    ActionRegistry.hpp
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    1.7 KB
    
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    10aee4
     
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    10 years
   | 
  FrederikHeber | 
  
    Cleaned up ActionQueue's interface: Actions are always cloned.
- …
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    ActionSequence.cpp
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    6.0 KB
    
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    10aee4
     
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    10 years
   | 
  FrederikHeber | 
  
    Cleaned up ActionQueue's interface: Actions are always cloned.
- …
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    ActionSequence.hpp
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    1.6 KB
    
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    10aee4
     
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    10 years
   | 
  FrederikHeber | 
  
    Cleaned up ActionQueue's interface: Actions are always cloned.
- …
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    ActionState.hpp
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    787 bytes
    
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    b5b01e
     
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    12 years
   | 
  FrederikHeber | 
  
    ActionState extracted into own header file, rename Action::state_ptr …
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    ActionStatusList.cpp
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    2.1 KB
    
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    574d377
     
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    10 years
   | 
  FrederikHeber | 
  
    Using static Observable::..NotificationsChannel() functions.
- …
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    ActionStatusList.hpp
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    1.9 KB
    
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    26b4eb4
     
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    11 years
   | 
  FrederikHeber | 
  
    Added observable ActionStatusList to ActionQueue.
- this allows to …
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    ActionTrait.cpp
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    5.8 KB
    
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    94d5ac6
     
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    13 years
   | 
  FrederikHeber | 
  
    FIX: As we use GSL internally, we are as of now required to use GPL v2 …
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    ActionTrait.hpp
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    1.8 KB
    
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    3139b2
     
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    14 years
   | 
  FrederikHeber | 
  
    Renamed ActionTrait and ActionTraits.
- the specialized Trait …
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    ActionTraits.hpp
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    798 bytes
    
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    3139b2
     
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    14 years
   | 
  FrederikHeber | 
  
    Renamed ActionTrait and ActionTraits.
- the specialized Trait …
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    AtomsCalculation.hpp
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    795 bytes
    
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    af5384
     
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    12 years
   | 
  FrederikHeber | 
  
    Actions can now clone() and split off prepare() from call().
- …
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    AtomsCalculation_impl.hpp
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    1.5 KB
    
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    af5384
     
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    12 years
   | 
  FrederikHeber | 
  
    Actions can now clone() and split off prepare() from call().
- …
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    Calculation.hpp
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    2.1 KB
    
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    a82f61
     
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    10 years
   | 
  FrederikHeber | 
  
    Added Action::setOptionValue() which allows setting the option via a …
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    Calculation_impl.hpp
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    2.0 KB
    
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    a82f61
     
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    10 years
   | 
  FrederikHeber | 
  
    Added Action::setOptionValue() which allows setting the option via a …
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    DryRunAdvocate.hpp
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    701 bytes
    
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    f3db60
     
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    10 years
   | 
  FrederikHeber | 
  
    Added DryRun and NoDryRun actions.
- actions (un)set a flag inside …
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    ErrorAction.cpp
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    2.0 KB
    
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    477012
     
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    12 years
   | 
  FrederikHeber | 
  
    Added Action::outputAsPython() and ActionQueue::outputAsPython().
- …
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    ErrorAction.hpp
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    854 bytes
    
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    477012
     
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    12 years
   | 
  FrederikHeber | 
  
    Added Action::outputAsPython() and ActionQueue::outputAsPython().
- …
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    GlobalListOfActions.hpp
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    5.4 KB
    
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    73a5f7
     
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    9 years
   | 
  FrederikHeber | 
  
    Added parsing and saving of fragment results container state.
- TEST: …
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    Makefile.am
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    31.9 KB
    
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    73a5f7
     
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    9 years
   | 
  FrederikHeber | 
  
    Added parsing and saving of fragment results container state.
- TEST: …
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    MakroAction.cpp
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    4.3 KB
    
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    10aee4
     
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    10 years
   | 
  FrederikHeber | 
  
    Cleaned up ActionQueue's interface: Actions are always cloned.
- …
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    MakroAction.hpp
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    2.5 KB
    
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    10aee4
     
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    10 years
   | 
  FrederikHeber | 
  
    Cleaned up ActionQueue's interface: Actions are always cloned.
- …
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    MakroAction_impl_header.hpp
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    9.5 KB
    
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    329cf3
     
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    11 years
   | 
  FrederikHeber | 
  
    FIX: All MakroActions now have prototype_actions and copy from that.
 …
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    MakroAction_impl_pre.hpp
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    13.8 KB
    
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    10aee4
     
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    10 years
   | 
  FrederikHeber | 
  
    Cleaned up ActionQueue's interface: Actions are always cloned.
- …
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    ManipulateAtomsProcess.cpp
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    2.9 KB
    
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    a82f61
     
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    10 years
   | 
  FrederikHeber | 
  
    Added Action::setOptionValue() which allows setting the option via a …
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    ManipulateAtomsProcess.hpp
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    1.5 KB
    
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    a82f61
     
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    10 years
   | 
  FrederikHeber | 
  
    Added Action::setOptionValue() which allows setting the option via a …
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    MethodAction.cpp
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    2.5 KB
    
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    a82f61
     
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    10 years
   | 
  FrederikHeber | 
  
    Added Action::setOptionValue() which allows setting the option via a …
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    MethodAction.hpp
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    1.2 KB
    
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    a82f61
     
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    10 years
   | 
  FrederikHeber | 
  
    Added Action::setOptionValue() which allows setting the option via a …
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    OptionRegistry.cpp
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    4.6 KB
    
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    690741
     
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    12 years
   | 
  FrederikHeber | 
  
    Added getListOfActions() and getActionsTrait() to completely wrap …
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    OptionRegistry.hpp
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    956 bytes
    
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    126867
     
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    12 years
   | 
  FrederikHeber | 
  
    Actions no longer register themselves, ActionQueue::addAction() …
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    OptionTrait.cpp
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    4.9 KB
    
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    94d5ac6
     
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    13 years
   | 
  FrederikHeber | 
  
    FIX: As we use GSL internally, we are as of now required to use GPL v2 …
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    OptionTrait.hpp
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    1.4 KB
    
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    d41313
     
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    14 years
   | 
  FrederikHeber | 
  
    Added output operators for both ActionTraits and OptionTrait.
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    Process.cpp
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    2.8 KB
    
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    8946a0
     
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    11 years
   | 
  FrederikHeber | 
  
    FIX: Process' dstor would always stop() even if not start()ed.
- this …
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    Process.hpp
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    2.3 KB
    
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    c09f94
     
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    12 years
   | 
  FrederikHeber | 
  
    Transformed FragmentationAutomationAction into a Process.
- Removed …
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    RedoAction.cpp
   | 
  
    1.9 KB
    
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    6367dd
     
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    12 years
   | 
  FrederikHeber | 
  
    ActionHistory now is part of ActionQueue.
- TESTFIX: changes to …
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    RedoAction.def
   | 
  
    865 bytes
    
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    6ba9ba
     
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    13 years
   | 
  FrederikHeber | 
  
    Default values are properly set by the Action into their …
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    RedoAction.hpp
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    327 bytes
    
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    e4afb4
     
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    15 years
   | 
  FrederikHeber | 
  
    Huge refactoring: Introduction of Traits to Actions.
This change is …
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    toCLIString.cpp
   | 
  
    2.3 KB
    
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    33e801
     
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    10 years
   | 
  FrederikHeber | 
  
    Added ParameterPair (i.e. "key = value;") to allow other string …
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    toCLIString.hpp
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    1.7 KB
    
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    33e801
     
   | 
  
    10 years
   | 
  FrederikHeber | 
  
    Added ParameterPair (i.e. "key = value;") to allow other string …
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    toPythonString.cpp
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    2.4 KB
    
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    33e801
     
   | 
  
    10 years
   | 
  FrederikHeber | 
  
    Added ParameterPair (i.e. "key = value;") to allow other string …
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    toPythonString.hpp
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    1.7 KB
    
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    33e801
     
   | 
  
    10 years
   | 
  FrederikHeber | 
  
    Added ParameterPair (i.e. "key = value;") to allow other string …
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    UndoAction.cpp
   | 
  
    1.9 KB
    
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    6367dd
     
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    12 years
   | 
  FrederikHeber | 
  
    ActionHistory now is part of ActionQueue.
- TESTFIX: changes to …
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    UndoAction.def
   | 
  
    861 bytes
    
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    6ba9ba
     
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    13 years
   | 
  FrederikHeber | 
  
    Default values are properly set by the Action into their …
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    UndoAction.hpp
   | 
  
    327 bytes
    
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    e4afb4
     
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    15 years
   | 
  FrederikHeber | 
  
    Huge refactoring: Introduction of Traits to Actions.
This change is …
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  | 
    UndoRedoHelpers.cpp
   | 
  
    8.2 KB
    
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    8ad68b
     
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    10 years
   | 
  FrederikHeber | 
  
    AddAction and UndoRedoHelpers' AddAtomsFromAtomicInfo use recreate..().
   | 
  | 
    UndoRedoHelpers.hpp
   | 
  
    4.9 KB
    
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    596cfa
     
   | 
  
    11 years
   | 
  FrederikHeber | 
  
    Extended UndoRedoHelpers by AddingMultipleMoleculesfromAtomicInfo.
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  | 
    Values.cpp
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    1.8 KB
    
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    33e801
     
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    10 years
   | 
  FrederikHeber | 
  
    Added ParameterPair (i.e. "key = value;") to allow other string …
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    Values.hpp
   | 
  
    1.1 KB
    
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    33e801
     
   | 
  
    10 years
   | 
  FrederikHeber | 
  
    Added ParameterPair (i.e. "key = value;") to allow other string …
   |