1 | /*
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2 | * Project: MoleCuilder
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3 | * Description: creates and alters molecular systems
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4 | * Copyright (C) 2010 University of Bonn. All rights reserved.
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5 | * Please see the LICENSE file or "Copyright notice" in builder.cpp for details.
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6 | */
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7 |
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8 | /*
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9 | * pyMoleCuilder.cpp
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10 | *
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11 | * Created on: Sep 21, 2011
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12 | * Author: heber
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13 | */
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14 |
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15 | // include config.h
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16 | #ifdef HAVE_CONFIG_H
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17 | #include <config.h>
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18 | #endif
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19 |
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20 | #include <boost/python.hpp>
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21 | #include <boost/python/module.hpp>
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22 | #include <boost/python/args.hpp>
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23 |
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24 | #include "CodePatterns/MemDebug.hpp"
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25 |
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26 | //!> define all present actions
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27 | #include "GlobalListOfActions.hpp"
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28 |
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29 | //!> python wrapping for all of these actions
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30 | #include "AllActionPython.hpp"
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31 |
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32 | #include "cleanUp.hpp"
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33 | #include "Actions/ActionHistory.hpp"
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34 | #include "cleanUp.hpp"
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35 |
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36 | namespace MoleCuilder {
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37 |
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38 | namespace detail {
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39 |
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40 | void module_exit()
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41 | {
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42 | // save everything
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43 | std::cout << "Saving." << std::endl;
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44 | saveAll();
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45 | // purge everything
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46 | std::cout << "Cleaning memory." << std::endl;
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47 | cleanUp();
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48 | }
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49 |
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50 | void module_reinit()
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51 | {
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52 | // save everything
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53 | std::cout << "Saving." << std::endl;
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54 | saveAll();
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55 | // purge everything
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56 | std::cout << "Cleaning static instances from memory." << std::endl;
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57 | purgeStaticInstances();
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58 | // need to init the history before any action is created
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59 | std::cout << "Reinitializing." << std::endl;
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60 | MoleCuilder::ActionHistory::init();
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61 | }
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62 |
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63 | } /* namespace MoleCuilder */
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64 | } /* namespace detail */
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65 |
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66 | BOOST_PYTHON_MODULE(pyMoleCuilder)
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67 | {
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68 | // need to init the history before any action is created
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69 | MoleCuilder::ActionHistory::init();
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70 |
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71 | // from this moment on, we need to be sure to deeinitialize in the correct order
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72 | // this is handled by the cleanup function
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73 | atexit(MoleCuilder::detail::module_exit);
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74 |
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75 | // set the docstring of the current module scope
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76 | boost::python::scope().attr("__doc__") = "pyMolecuilder are the python bindings to all Actions of the program suite MoleCuilder.\n\nMoleCuilder is a program to build molecular (dynamics) worlds, allowing you indefinite manipulation, control and analysis over the atoms and molecules within a simulation domain.";
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77 |
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78 | boost::python::def("reinit", MoleCuilder::detail::module_reinit, "Reinitializes the internal state of the python module as if it had been freshly imported, saves all input files beforehand.");
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79 | #define export_print(z,n,list) \
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80 | BOOST_PP_CAT(export_, BOOST_PP_SEQ_ELEM(n, list))();
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81 | #define BOOST_PP_LOCAL_MACRO(n) export_print(~, n, GLOBALLISTOFACTIONS)
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82 | #define BOOST_PP_LOCAL_LIMITS (0, BOOST_PP_DEC(BOOST_PP_SEQ_SIZE(GLOBALLISTOFACTIONS)))
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83 | #include BOOST_PP_LOCAL_ITERATE()
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84 | #undef instance_print
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85 | }
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