source: src/Actions/WorldAction/CenterInBoxAction.cpp@ 7d9416

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Last change on this file since 7d9416 was 7d9416, checked in by Frederik Heber <heber@…>, 13 years ago

Turned query<Box> into query<RealSpaceMatrix>

  • Property mode set to 100644
File size: 4.5 KB
Line 
1/*
2 * Project: MoleCuilder
3 * Description: creates and alters molecular systems
4 * Copyright (C) 2010-2012 University of Bonn. All rights reserved.
5 * Please see the LICENSE file or "Copyright notice" in builder.cpp for details.
6 */
7
8/*
9 * CenterInBoxAction.cpp
10 *
11 * Created on: May 8, 2010
12 * Author: heber
13 */
14
15// include config.h
16#ifdef HAVE_CONFIG_H
17#include <config.h>
18#endif
19
20// include headers that implement a archive in simple text format
21#include <boost/archive/text_oarchive.hpp>
22#include <boost/archive/text_iarchive.hpp>
23#include "boost/serialization/vector.hpp"
24
25#include "CodePatterns/MemDebug.hpp"
26
27#include <boost/shared_ptr.hpp>
28
29#include "Box.hpp"
30#include "CodePatterns/Log.hpp"
31#include "LinearAlgebra/MatrixContent.hpp"
32#include "LinearAlgebra/RealSpaceMatrix.hpp"
33#include "molecule.hpp"
34#include "World.hpp"
35
36#include <iostream>
37#include <string>
38#include <vector>
39
40#include "Actions/WorldAction/CenterInBoxAction.hpp"
41
42using namespace MoleCuilder;
43
44// and construct the stuff
45#include "CenterInBoxAction.def"
46#include "Action_impl_pre.hpp"
47/** =========== define the function ====================== */
48Action::state_ptr WorldCenterInBoxAction::performCall() {
49 // create undo state
50 std::stringstream undostream;
51 boost::archive::text_oarchive oa(undostream);
52 const RealSpaceMatrix &matrix = World::getInstance().getDomain().getM();
53 oa << matrix;
54 std::vector< boost::shared_ptr<Vector> > OldPositions;
55 std::vector<molecule*> AllMolecules = World::getInstance().getAllMolecules();
56 for (std::vector<molecule*>::iterator MolRunner = AllMolecules.begin();
57 MolRunner != AllMolecules.end();
58 ++MolRunner) {
59 for(molecule::const_iterator AtomRunner = (*MolRunner)->begin();
60 AtomRunner != (*MolRunner)->end();
61 ++AtomRunner) {
62 OldPositions.push_back(
63 boost::shared_ptr<Vector>(new Vector(
64 (*AtomRunner)->getPosition()
65 ))
66 );
67 }
68 }
69
70 // set new domain
71 World::getInstance().setDomain(params.cell_size.get());
72
73 // center atoms
74 for (std::vector<molecule*>::iterator MolRunner = AllMolecules.begin(); MolRunner != AllMolecules.end(); ++MolRunner) {
75 (*MolRunner)->CenterInBox();
76 }
77
78 // give final box size
79 LOG(0, "Box domain is now " << World::getInstance().getDomain().getM());
80
81 // create undo state
82 WorldCenterInBoxState *UndoState =
83 new WorldCenterInBoxState(
84 undostream.str(),
85 OldPositions,
86 params
87 );
88
89 return Action::state_ptr(UndoState);
90}
91
92Action::state_ptr WorldCenterInBoxAction::performUndo(Action::state_ptr _state) {
93 WorldCenterInBoxState *state = assert_cast<WorldCenterInBoxState*>(_state.get());
94
95 // restore domain
96 RealSpaceMatrix matrix;
97 std::stringstream undostream(state->undostring);
98 boost::archive::text_iarchive ia(undostream);
99 ia >> matrix;
100 World::getInstance().setDomain(matrix);
101
102 // place atoms on old positions
103 std::vector< boost::shared_ptr<Vector> >::const_iterator OldPositionsIter = state->OldPositions.begin();
104 std::vector<molecule*> AllMolecules = World::getInstance().getAllMolecules();
105 for (std::vector<molecule*>::iterator MolRunner = AllMolecules.begin();
106 MolRunner != AllMolecules.end();
107 ++MolRunner) {
108 for(molecule::iterator AtomRunner = (*MolRunner)->begin();
109 AtomRunner != (*MolRunner)->end();
110 ++AtomRunner) {
111 ASSERT(OldPositionsIter != state->OldPositions.end(),
112 "WorldBoundInBoxAction::performUndo() - too few positions stored in UndoState.");
113 (*AtomRunner)->setPosition(**(OldPositionsIter++));
114 }
115 }
116
117 // give final box size
118 LOG(0, "Box domain restored to " << World::getInstance().getDomain().getM());
119
120 return Action::state_ptr(_state);
121}
122
123Action::state_ptr WorldCenterInBoxAction::performRedo(Action::state_ptr _state){
124 WorldCenterInBoxState *state = assert_cast<WorldCenterInBoxState*>(_state.get());
125
126 // set new domain
127 World::getInstance().setDomain(state->params.cell_size.get());
128
129 // center atoms
130 std::vector<molecule *> AllMolecules = World::getInstance().getAllMolecules();
131 for (std::vector<molecule*>::iterator MolRunner = AllMolecules.begin(); MolRunner != AllMolecules.end(); ++MolRunner) {
132 (*MolRunner)->CenterInBox();
133 }
134
135 // give final box size
136 LOG(0, "Box domain is again " << World::getInstance().getDomain().getM());
137
138 return Action::state_ptr(_state);
139}
140
141bool WorldCenterInBoxAction::canUndo() {
142 return true;
143}
144
145bool WorldCenterInBoxAction::shouldUndo() {
146 return true;
147}
148/** =========== end of function ====================== */
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