[bcf653] | 1 | /*
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| 2 | * Project: MoleCuilder
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| 3 | * Description: creates and alters molecular systems
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| 4 | * Copyright (C) 2010 University of Bonn. All rights reserved.
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| 5 | * Please see the LICENSE file or "Copyright notice" in builder.cpp for details.
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| 6 | */
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| 7 |
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[97ebf8] | 8 | /*
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| 9 | * ConvexEnvelopeAction.cpp
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| 10 | *
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| 11 | * Created on: May 12, 2010
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| 12 | * Author: heber
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| 13 | */
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| 14 |
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[bf3817] | 15 | // include config.h
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| 16 | #ifdef HAVE_CONFIG_H
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| 17 | #include <config.h>
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| 18 | #endif
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| 19 |
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[ad011c] | 20 | #include "CodePatterns/MemDebug.hpp"
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[112b09] | 21 |
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[628b52] | 22 | #include "boundary.hpp"
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| 23 | #include "config.hpp"
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| 24 | #include "linkedcell.hpp"
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[ad011c] | 25 | #include "CodePatterns/Log.hpp"
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[628b52] | 26 | #include "molecule.hpp"
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[88b400] | 27 | #include "tesselation.hpp"
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[ad011c] | 28 | #include "CodePatterns/Verbose.hpp"
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[628b52] | 29 | #include "World.hpp"
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[97ebf8] | 30 |
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| 31 | #include <iostream>
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| 32 | #include <string>
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| 33 |
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| 34 | using namespace std;
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| 35 |
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[1fd675] | 36 | #include "Actions/TesselationAction/ConvexEnvelopeAction.hpp"
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[8ae5d5] | 37 |
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[1fd675] | 38 | // and construct the stuff
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| 39 | #include "ConvexEnvelopeAction.def"
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| 40 | #include "Action_impl_pre.hpp"
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| 41 | /** =========== define the function ====================== */
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[97ebf8] | 42 | Action::state_ptr TesselationConvexEnvelopeAction::performCall() {
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| 43 | molecule * mol = NULL;
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[8ae5d5] | 44 | bool Success = true;
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[f6bd32] | 45 | config *configuration = World::getInstance().getConfig();
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[97ebf8] | 46 |
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[1fd675] | 47 | // obtain information
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| 48 | getParametersfromValueStorage();
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[97ebf8] | 49 |
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[8ae5d5] | 50 | for (World::MoleculeSelectionIterator iter = World::getInstance().beginMoleculeSelection(); iter != World::getInstance().endMoleculeSelection(); ++iter) {
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| 51 | mol = iter->second;
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[97ebf8] | 52 | class Tesselation *TesselStruct = NULL;
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| 53 | const LinkedCell *LCList = NULL;
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| 54 | DoLog(0) && (Log() << Verbose(0) << "Evaluating volume of the convex envelope.");
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[1fd675] | 55 | DoLog(1) && (Log() << Verbose(1) << "Storing tecplot convex data in " << params.filenameConvex << "." << endl);
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| 56 | DoLog(1) && (Log() << Verbose(1) << "Storing tecplot non-convex data in " << params.filenameNonConvex << "." << endl);
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[af2c424] | 57 | LCList = new LinkedCell(*mol, 100.);
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[25b9d2] | 58 | //Boundaries *BoundaryPoints = NULL;
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[bdc91e] | 59 | //FindConvexBorder(mol, BoundaryPoints, TesselStruct, LCList, argv[argptr]);
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[97ebf8] | 60 | // TODO: Beide Funktionen sollten streams anstelle des Filenamen benutzen, besser fuer unit tests
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[e4afb4] | 61 | FindNonConvexBorder(mol, TesselStruct, LCList, 50., params.filenameNonConvex.string().c_str());
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[97ebf8] | 62 | //RemoveAllBoundaryPoints(TesselStruct, mol, argv[argptr]);
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[e4afb4] | 63 | const double volumedifference = ConvexizeNonconvexEnvelope(TesselStruct, mol, params.filenameConvex.string().c_str());
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[f6bd32] | 64 | const double clustervolume = VolumeOfConvexEnvelope(TesselStruct, configuration);
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| 65 | DoLog(0) && (Log() << Verbose(0) << "The tesselated volume area is " << clustervolume << " " << (configuration->GetIsAngstroem() ? "angstrom" : "atomiclength") << "^3." << endl);
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| 66 | DoLog(0) && (Log() << Verbose(0) << "The non-convex tesselated volume area is " << clustervolume-volumedifference << " " << (configuration->GetIsAngstroem() ? "angstrom" : "atomiclength") << "^3." << endl);
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[97ebf8] | 67 | delete(TesselStruct);
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| 68 | delete(LCList);
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| 69 | }
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[8ae5d5] | 70 | if (Success)
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| 71 | return Action::success;
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| 72 | else
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| 73 | return Action::failure;
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[97ebf8] | 74 | }
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| 75 |
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| 76 | Action::state_ptr TesselationConvexEnvelopeAction::performUndo(Action::state_ptr _state) {
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| 77 | // TesselationConvexEnvelopeState *state = assert_cast<TesselationConvexEnvelopeState*>(_state.get());
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| 78 |
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| 79 | // string newName = state->mol->getName();
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| 80 | // state->mol->setName(state->lastName);
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| 81 |
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| 82 | return Action::failure;
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| 83 | }
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| 84 |
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| 85 | Action::state_ptr TesselationConvexEnvelopeAction::performRedo(Action::state_ptr _state){
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| 86 | // Undo and redo have to do the same for this action
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| 87 | return performUndo(_state);
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| 88 | }
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| 89 |
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| 90 | bool TesselationConvexEnvelopeAction::canUndo() {
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| 91 | return false;
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| 92 | }
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| 93 |
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| 94 | bool TesselationConvexEnvelopeAction::shouldUndo() {
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| 95 | return false;
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| 96 | }
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[1fd675] | 97 | /** =========== end of function ====================== */
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