| 1 | /* | 
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| 2 | * Project: MoleCuilder | 
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| 3 | * Description: creates and alters molecular systems | 
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| 4 | * Copyright (C)  2012 University of Bonn. All rights reserved. | 
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| 5 | * | 
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| 6 | * | 
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| 7 | *   This file is part of MoleCuilder. | 
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| 8 | * | 
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| 9 | *    MoleCuilder is free software: you can redistribute it and/or modify | 
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| 10 | *    it under the terms of the GNU General Public License as published by | 
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| 11 | *    the Free Software Foundation, either version 2 of the License, or | 
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| 12 | *    (at your option) any later version. | 
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| 13 | * | 
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| 14 | *    MoleCuilder is distributed in the hope that it will be useful, | 
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| 15 | *    but WITHOUT ANY WARRANTY; without even the implied warranty of | 
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| 16 | *    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | 
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| 17 | *    GNU General Public License for more details. | 
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| 18 | * | 
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| 19 | *    You should have received a copy of the GNU General Public License | 
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| 20 | *    along with MoleCuilder.  If not, see <http://www.gnu.org/licenses/>. | 
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| 21 | */ | 
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| 22 |  | 
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| 23 | /* | 
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| 24 | * StretchBondAction.cpp | 
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| 25 | * | 
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| 26 | *  Created on: Sep 26, 2012 | 
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| 27 | *      Author: heber | 
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| 28 | */ | 
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| 29 |  | 
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| 30 | // include config.h | 
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| 31 | #ifdef HAVE_CONFIG_H | 
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| 32 | #include <config.h> | 
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| 33 | #endif | 
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| 34 |  | 
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| 35 | //#include "CodePatterns/MemDebug.hpp" | 
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| 36 |  | 
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| 37 | #include "Actions/MoleculeAction/StretchBondAction.hpp" | 
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| 38 |  | 
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| 39 | #include <boost/bind.hpp> | 
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| 40 |  | 
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| 41 | #include "CodePatterns/Log.hpp" | 
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| 42 | #include "CodePatterns/Verbose.hpp" | 
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| 43 |  | 
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| 44 | #include "LinearAlgebra/Plane.hpp" | 
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| 45 |  | 
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| 46 | #include "Atom/atom.hpp" | 
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| 47 | #include "Bond/bond.hpp" | 
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| 48 | #include "Bond/StretchBond.hpp" | 
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| 49 | #include "Graph/BoostGraphHelpers.hpp" | 
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| 50 | #include "World.hpp" | 
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| 51 |  | 
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| 52 | using namespace MoleCuilder; | 
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| 53 |  | 
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| 54 | // and construct the stuff | 
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| 55 | #include "StretchBondAction.def" | 
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| 56 | #include "Action_impl_pre.hpp" | 
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| 57 |  | 
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| 58 |  | 
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| 59 | /** =========== define the function ====================== */ | 
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| 60 | ActionState::ptr MoleculeStretchBondAction::performCall() | 
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| 61 | { | 
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| 62 | const std::vector< atom *> atoms = World::getInstance().getSelectedAtoms(); | 
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| 63 | StretchBondUtil stretcher(atoms); | 
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| 64 |  | 
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| 65 | const double bonddistance = params.bonddistance.get(); | 
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| 66 | bool status = stretcher(bonddistance); | 
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| 67 |  | 
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| 68 | if (status) { | 
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| 69 | MoleculeStretchBondState *UndoState = | 
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| 70 | new MoleculeStretchBondState( | 
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| 71 | stretcher.getShift(), | 
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| 72 | stretcher.getBondSides(), | 
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| 73 | &stretcher.getMolecule(), | 
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| 74 | params); | 
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| 75 | return ActionState::ptr(UndoState); | 
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| 76 | } else { | 
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| 77 | STATUS("Failed, exactly two atoms must be selected."); | 
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| 78 | return Action::failure; | 
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| 79 | } | 
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| 80 | } | 
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| 81 |  | 
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| 82 | ActionState::ptr MoleculeStretchBondAction::performUndo(ActionState::ptr _state) { | 
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| 83 | MoleculeStretchBondState *state = assert_cast<MoleculeStretchBondState*>(_state.get()); | 
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| 84 |  | 
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| 85 | // use given plane to undo | 
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| 86 | Box &domain = World::getInstance().getDomain(); | 
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| 87 | for (size_t i=0;i<2;++i) { | 
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| 88 | for (BoostGraphHelpers::Nodeset_t::const_iterator iter = state->bondside_sets[i].begin(); | 
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| 89 | iter != state->bondside_sets[i].end(); ++iter) { | 
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| 90 | atom &walker = *World::getInstance().getAtom(AtomById(*iter)); | 
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| 91 | const Vector &position = walker.getPosition(); | 
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| 92 | walker.setPosition( domain.enforceBoundaryConditions(position-state->Shift[i]) ); | 
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| 93 | } | 
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| 94 | } | 
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| 95 |  | 
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| 96 | return ActionState::ptr(_state); | 
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| 97 | } | 
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| 98 |  | 
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| 99 | ActionState::ptr MoleculeStretchBondAction::performRedo(ActionState::ptr _state){ | 
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| 100 | MoleculeStretchBondState *state = assert_cast<MoleculeStretchBondState*>(_state.get()); | 
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| 101 |  | 
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| 102 | Box &domain = World::getInstance().getDomain(); | 
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| 103 | for (size_t i=0;i<2;++i) { | 
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| 104 | for (BoostGraphHelpers::Nodeset_t::const_iterator iter = state->bondside_sets[i].begin(); | 
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| 105 | iter != state->bondside_sets[i].end(); ++iter) { | 
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| 106 | atom &walker = *World::getInstance().getAtom(AtomById(*iter)); | 
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| 107 | const Vector &position = walker.getPosition(); | 
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| 108 | walker.setPosition( domain.enforceBoundaryConditions(position+state->Shift[i]) ); | 
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| 109 | } | 
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| 110 | } | 
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| 111 |  | 
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| 112 | return ActionState::ptr(_state); | 
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| 113 | } | 
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| 114 |  | 
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| 115 | bool MoleculeStretchBondAction::canUndo() { | 
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| 116 | return true; | 
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| 117 | } | 
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| 118 |  | 
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| 119 | bool MoleculeStretchBondAction::shouldUndo() { | 
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| 120 | return true; | 
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| 121 | } | 
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| 122 | /** =========== end of function ====================== */ | 
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