| 1 | /* | 
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| 2 | * Project: MoleCuilder | 
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| 3 | * Description: creates and alters molecular systems | 
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| 4 | * Copyright (C)  2010 University of Bonn. All rights reserved. | 
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| 5 | * Please see the LICENSE file or "Copyright notice" in builder.cpp for details. | 
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| 6 | */ | 
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| 7 |  | 
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| 8 | /* | 
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| 9 | * LinearInterpolationofTrajectoriesAction.cpp | 
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| 10 | * | 
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| 11 | *  Created on: May 10, 2010 | 
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| 12 | *      Author: heber | 
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| 13 | */ | 
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| 14 |  | 
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| 15 | // include config.h | 
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| 16 | #ifdef HAVE_CONFIG_H | 
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| 17 | #include <config.h> | 
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| 18 | #endif | 
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| 19 |  | 
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| 20 | #include "Helpers/MemDebug.hpp" | 
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| 21 |  | 
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| 22 | #include "Actions/MoleculeAction/LinearInterpolationofTrajectoriesAction.hpp" | 
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| 23 | #include "Actions/ActionRegistry.hpp" | 
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| 24 | #include "atom.hpp" | 
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| 25 | #include "defs.hpp" | 
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| 26 | #include "Helpers/Log.hpp" | 
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| 27 | #include "molecule.hpp" | 
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| 28 | #include "Helpers/Verbose.hpp" | 
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| 29 | #include "World.hpp" | 
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| 30 |  | 
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| 31 | #include <iostream> | 
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| 32 | #include <fstream> | 
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| 33 | #include <string> | 
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| 34 |  | 
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| 35 | using namespace std; | 
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| 36 |  | 
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| 37 | #include "UIElements/UIFactory.hpp" | 
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| 38 | #include "UIElements/Dialog.hpp" | 
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| 39 | #include "Actions/ValueStorage.hpp" | 
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| 40 |  | 
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| 41 |  | 
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| 42 | /****** MoleculeLinearInterpolationofTrajectoriesAction *****/ | 
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| 43 |  | 
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| 44 | // memento to remember the state when undoing | 
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| 45 |  | 
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| 46 | //class MoleculeLinearInterpolationofTrajectoriesState : public ActionState { | 
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| 47 | //public: | 
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| 48 | //  MoleculeLinearInterpolationofTrajectoriesState(molecule* _mol,std::string _lastName) : | 
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| 49 | //    mol(_mol), | 
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| 50 | //    lastName(_lastName) | 
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| 51 | //  {} | 
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| 52 | //  molecule* mol; | 
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| 53 | //  std::string lastName; | 
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| 54 | //}; | 
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| 55 |  | 
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| 56 | const char MoleculeLinearInterpolationofTrajectoriesAction::NAME[] = "linear-interpolate"; | 
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| 57 |  | 
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| 58 | MoleculeLinearInterpolationofTrajectoriesAction::MoleculeLinearInterpolationofTrajectoriesAction() : | 
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| 59 | Action(NAME) | 
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| 60 | {} | 
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| 61 |  | 
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| 62 | MoleculeLinearInterpolationofTrajectoriesAction::~MoleculeLinearInterpolationofTrajectoriesAction() | 
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| 63 | {} | 
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| 64 |  | 
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| 65 | void MoleculeLinearInterpolationofTrajectories(std::string &filename, int start, int end, bool IdMapping) { | 
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| 66 | ValueStorage::getInstance().setCurrentValue(MoleculeLinearInterpolationofTrajectoriesAction::NAME, filename); | 
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| 67 | ValueStorage::getInstance().setCurrentValue("start-step", start); | 
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| 68 | ValueStorage::getInstance().setCurrentValue("end-step", end); | 
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| 69 | ValueStorage::getInstance().setCurrentValue("id-mapping", IdMapping); | 
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| 70 | ActionRegistry::getInstance().getActionByName(MoleculeLinearInterpolationofTrajectoriesAction::NAME)->call(Action::NonInteractive); | 
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| 71 | }; | 
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| 72 |  | 
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| 73 | Dialog* MoleculeLinearInterpolationofTrajectoriesAction::fillDialog(Dialog *dialog) { | 
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| 74 | ASSERT(dialog,"No Dialog given when filling action dialog"); | 
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| 75 |  | 
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| 76 | dialog->queryString(NAME, ValueStorage::getInstance().getDescription(NAME)); | 
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| 77 | dialog->queryInt("start-step", ValueStorage::getInstance().getDescription("start-step")); | 
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| 78 | dialog->queryInt("end-step", ValueStorage::getInstance().getDescription("end-step")); | 
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| 79 | dialog->queryBoolean("id-mapping", ValueStorage::getInstance().getDescription("id-mapping")); | 
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| 80 |  | 
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| 81 | return dialog; | 
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| 82 | } | 
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| 83 |  | 
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| 84 | Action::state_ptr MoleculeLinearInterpolationofTrajectoriesAction::performCall() { | 
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| 85 | string filename; | 
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| 86 | molecule *mol = NULL; | 
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| 87 | int start = -1; | 
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| 88 | int end = -1; | 
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| 89 | bool IdMapping = true; | 
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| 90 |  | 
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| 91 | ValueStorage::getInstance().queryCurrentValue(NAME, filename); | 
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| 92 | ValueStorage::getInstance().queryCurrentValue("start-step", start); | 
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| 93 | ValueStorage::getInstance().queryCurrentValue("end-step", end); | 
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| 94 | ValueStorage::getInstance().queryCurrentValue("id-mapping", IdMapping); | 
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| 95 |  | 
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| 96 | for (World::MoleculeSelectionIterator iter = World::getInstance().beginMoleculeSelection(); iter != World::getInstance().endMoleculeSelection(); ++iter) { | 
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| 97 | mol = iter->second; | 
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| 98 | DoLog(1) && (Log() << Verbose(1) << "Linear interpolation between configuration " << start << " and " << end << "." << endl); | 
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| 99 | if (IdMapping) | 
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| 100 | DoLog(1) && (Log() << Verbose(1) << "Using Identity for the permutation map." << endl); | 
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| 101 | if (!mol->LinearInterpolationBetweenConfiguration(start, end, filename, *(World::getInstance().getConfig()), IdMapping)) | 
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| 102 | DoLog(2) && (Log() << Verbose(2) << "Could not store " << filename << " files." << endl); | 
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| 103 | else | 
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| 104 | DoLog(2) && (Log() << Verbose(2) << "Steps created and " << filename << " files stored." << endl); | 
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| 105 | } | 
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| 106 | return Action::success; | 
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| 107 | } | 
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| 108 |  | 
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| 109 | Action::state_ptr MoleculeLinearInterpolationofTrajectoriesAction::performUndo(Action::state_ptr _state) { | 
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| 110 | //  MoleculeLinearInterpolationofTrajectoriesState *state = assert_cast<MoleculeLinearInterpolationofTrajectoriesState*>(_state.get()); | 
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| 111 |  | 
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| 112 | //  string newName = state->mol->getName(); | 
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| 113 | //  state->mol->setName(state->lastName); | 
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| 114 |  | 
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| 115 | return Action::failure; | 
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| 116 | } | 
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| 117 |  | 
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| 118 | Action::state_ptr MoleculeLinearInterpolationofTrajectoriesAction::performRedo(Action::state_ptr _state){ | 
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| 119 | // Undo and redo have to do the same for this action | 
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| 120 | return performUndo(_state); | 
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| 121 | } | 
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| 122 |  | 
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| 123 | bool MoleculeLinearInterpolationofTrajectoriesAction::canUndo() { | 
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| 124 | return false; | 
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| 125 | } | 
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| 126 |  | 
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| 127 | bool MoleculeLinearInterpolationofTrajectoriesAction::shouldUndo() { | 
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| 128 | return false; | 
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| 129 | } | 
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| 130 |  | 
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| 131 | const string MoleculeLinearInterpolationofTrajectoriesAction::getName() { | 
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| 132 | return NAME; | 
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| 133 | } | 
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