1 | /*
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2 | * Project: MoleCuilder
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3 | * Description: creates and alters molecular systems
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4 | * Copyright (C) 2012 University of Bonn. All rights reserved.
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5 | *
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6 | *
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7 | * This file is part of MoleCuilder.
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8 | *
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9 | * MoleCuilder is free software: you can redistribute it and/or modify
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10 | * it under the terms of the GNU General Public License as published by
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11 | * the Free Software Foundation, either version 2 of the License, or
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12 | * (at your option) any later version.
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13 | *
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14 | * MoleCuilder is distributed in the hope that it will be useful,
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15 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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16 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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17 | * GNU General Public License for more details.
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18 | *
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19 | * You should have received a copy of the GNU General Public License
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20 | * along with MoleCuilder. If not, see <http://www.gnu.org/licenses/>.
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21 | */
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22 |
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23 | /*
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24 | * BondRemoveAction.cpp
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25 | *
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26 | * Created on: Nov 14, 2012
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27 | * Author: heber
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28 | */
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29 |
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30 | // include config.h
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31 | #ifdef HAVE_CONFIG_H
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32 | #include <config.h>
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33 | #endif
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34 |
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35 | #include "CodePatterns/MemDebug.hpp"
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36 |
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37 | #include "Atom/atom.hpp"
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38 | #include "Bond/bond.hpp"
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39 | #include "CodePatterns/Assert.hpp"
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40 | #include "CodePatterns/Log.hpp"
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41 | #include "CodePatterns/Verbose.hpp"
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42 | #include "Descriptors/AtomIdDescriptor.hpp"
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43 | #include "World.hpp"
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44 | #include "WorldTime.hpp"
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45 |
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46 | #include <iostream>
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47 | #include <string>
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48 |
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49 | #include "Actions/BondAction/BondRemoveAction.hpp"
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50 |
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51 | using namespace MoleCuilder;
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52 |
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53 | // and construct the stuff
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54 | #include "BondRemoveAction.def"
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55 | #include "Action_impl_pre.hpp"
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56 | /** =========== define the function ====================== */
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57 | ActionState::ptr BondRemoveAction::performCall() {
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58 | // check preconditions
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59 | World& world = World::getInstance();
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60 | if (world.countSelectedAtoms() <= 1) {
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61 | STATUS("At least two atoms must be selected for BondAction Remove.");
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62 | return Action::failure;
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63 | }
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64 |
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65 | bondPairIds_t bondPairIds;
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66 | for (World::AtomSelectionConstIterator firstiter = world.beginAtomSelection();
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67 | firstiter != world.endAtomSelection(); ++firstiter) {
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68 | for (World::AtomSelectionConstIterator seconditer = firstiter;
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69 | seconditer != world.endAtomSelection(); ++seconditer) {
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70 | if (firstiter == seconditer)
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71 | continue;
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72 | if ((firstiter->second)->IsBondedTo(WorldTime::getTime(), seconditer->second))
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73 | bondPairIds.push_back(
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74 | std::make_pair((firstiter->second)->getId(), (seconditer->second)->getId()));
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75 | }
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76 | }
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77 | if (bondPairIds.empty()) {
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78 | STATUS("No bonds are present.");
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79 | return Action::failure;
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80 | }
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81 |
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82 | // create undo
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83 | BondRemoveState *UndoState = new BondRemoveState(bondPairIds, params);
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84 |
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85 | // execute action
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86 | for (bondPairIds_t::const_iterator iter = bondPairIds.begin();
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87 | iter != bondPairIds.end(); ++iter) {
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88 | atom *firstatom = world.getAtom(AtomById(iter->first));
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89 | atom *secondatom = world.getAtom(AtomById(iter->second));
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90 | ASSERT((firstatom != NULL) && (secondatom != NULL),
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91 | "BondAddAction::performCall() - at least one of the ids "
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92 | +toString(iter->first)+" or "+toString(iter->second)+" is not present.");
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93 | firstatom->removeBond(WorldTime::getTime(), secondatom);
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94 | ASSERT( !firstatom->IsBondedTo(WorldTime::getTime(), secondatom),
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95 | "BondAddAction::performCall() - adding bond in between "
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96 | +toString(*firstatom)+" and "+toString(*secondatom)+" failed.");
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97 | }
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98 |
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99 | return ActionState::ptr(UndoState);
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100 | }
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101 |
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102 | ActionState::ptr BondRemoveAction::performUndo(ActionState::ptr _state) {
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103 | BondRemoveState *state = assert_cast<BondRemoveState*>(_state.get());
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104 |
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105 | World& world = World::getInstance();
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106 | for (bondPairIds_t::const_iterator iter = state->bondPairIds.begin();
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107 | iter != state->bondPairIds.end(); ++iter) {
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108 | atom * const firstatom = world.getAtom(AtomById(iter->first));
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109 | atom * const secondatom = world.getAtom(AtomById(iter->second));
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110 | ASSERT((firstatom != NULL) && (secondatom != NULL),
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111 | "BondAddAction::performCall() - at least one of the ids "
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112 | +toString(iter->first)+" or "+toString(iter->second)+" is not present.");
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113 | if (!firstatom->IsBondedTo(WorldTime::getTime(), secondatom)) {
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114 | firstatom->addBond(WorldTime::getTime(), secondatom);
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115 | } else {
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116 | ELOG(2, "There is already a bond in between "+toString(iter->first)
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117 | +" and "+toString(iter->second)+".");
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118 | }
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119 | }
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120 |
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121 | return ActionState::ptr(_state);
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122 | }
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123 |
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124 | ActionState::ptr BondRemoveAction::performRedo(ActionState::ptr _state){
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125 | BondRemoveState *state = assert_cast<BondRemoveState*>(_state.get());
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126 |
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127 | World& world = World::getInstance();
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128 | for (bondPairIds_t::const_iterator iter = state->bondPairIds.begin();
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129 | iter != state->bondPairIds.end(); ++iter) {
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130 | atom *firstatom = world.getAtom(AtomById(iter->first));
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131 | atom *secondatom = world.getAtom(AtomById(iter->second));
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132 | ASSERT((firstatom != NULL) && (secondatom != NULL),
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133 | "BondAddAction::performCall() - at least one of the ids "
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134 | +toString(iter->first)+" or "+toString(iter->second)+" is not present.");
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135 | if (firstatom->IsBondedTo(WorldTime::getTime(), secondatom)) {
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136 | firstatom->removeBond(WorldTime::getTime(), secondatom);
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137 | } else {
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138 | ELOG(2, "There is no bond in between "+toString(iter->first)
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139 | +" and "+toString(iter->second)+".");
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140 | }
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141 | }
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142 |
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143 | return ActionState::ptr(_state);
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144 | }
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145 |
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146 | bool BondRemoveAction::canUndo() {
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147 | return true;
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148 | }
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149 |
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150 | bool BondRemoveAction::shouldUndo() {
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151 | return true;
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152 | }
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153 | /** =========== end of function ====================== */
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