Action_Thermostats
Add_AtomRandomPerturbation
Add_FitFragmentPartialChargesAction
Add_RotateAroundBondAction
Add_SelectAtomByNameAction
Added_ParseSaveFragmentResults
AddingActions_SaveParseParticleParameters
Adding_Graph_to_ChangeBondActions
Adding_MD_integration_tests
Adding_ParticleName_to_Atom
Adding_StructOpt_integration_tests
AtomFragments
Automaking_mpqc_open
AutomationFragmentation_failures
Candidate_v1.5.4
Candidate_v1.6.0
Candidate_v1.6.1
ChangeBugEmailaddress
ChangingTestPorts
ChemicalSpaceEvaluator
CombiningParticlePotentialParsing
Combining_Subpackages
Debian_Package_split
Debian_package_split_molecuildergui_only
Disabling_MemDebug
Docu_Python_wait
EmpiricalPotential_contain_HomologyGraph
EmpiricalPotential_contain_HomologyGraph_documentation
Enable_parallel_make_install
Enhance_userguide
Enhanced_StructuralOptimization
Enhanced_StructuralOptimization_continued
Example_ManyWaysToTranslateAtom
Exclude_Hydrogens_annealWithBondGraph
FitPartialCharges_GlobalError
Fix_BoundInBox_CenterInBox_MoleculeActions
Fix_ChargeSampling_PBC
Fix_ChronosMutex
Fix_FitPartialCharges
Fix_FitPotential_needs_atomicnumbers
Fix_ForceAnnealing
Fix_IndependentFragmentGrids
Fix_ParseParticles
Fix_ParseParticles_split_forward_backward_Actions
Fix_PopActions
Fix_QtFragmentList_sorted_selection
Fix_Restrictedkeyset_FragmentMolecule
Fix_StatusMsg
Fix_StepWorldTime_single_argument
Fix_Verbose_Codepatterns
Fix_fitting_potentials
Fixes
ForceAnnealing_goodresults
ForceAnnealing_oldresults
ForceAnnealing_tocheck
ForceAnnealing_with_BondGraph
ForceAnnealing_with_BondGraph_continued
ForceAnnealing_with_BondGraph_continued_betteresults
ForceAnnealing_with_BondGraph_contraction-expansion
FragmentAction_writes_AtomFragments
FragmentMolecule_checks_bonddegrees
GeometryObjects
Gui_Fixes
Gui_displays_atomic_force_velocity
ImplicitCharges
IndependentFragmentGrids
IndependentFragmentGrids_IndividualZeroInstances
IndependentFragmentGrids_IntegrationTest
IndependentFragmentGrids_Sole_NN_Calculation
JobMarket_RobustOnKillsSegFaults
JobMarket_StableWorkerPool
JobMarket_unresolvable_hostname_fix
MoreRobust_FragmentAutomation
ODR_violation_mpqc_open
PartialCharges_OrthogonalSummation
PdbParser_setsAtomName
PythonUI_with_named_parameters
QtGui_reactivate_TimeChanged_changes
Recreated_GuiChecks
Rewrite_FitPartialCharges
RotateToPrincipalAxisSystem_UndoRedo
SaturateAtoms_findBestMatching
SaturateAtoms_singleDegree
StoppableMakroAction
Subpackage_CodePatterns
Subpackage_JobMarket
Subpackage_LinearAlgebra
Subpackage_levmar
Subpackage_mpqc_open
Subpackage_vmg
Switchable_LogView
ThirdParty_MPQC_rebuilt_buildsystem
TrajectoryDependenant_MaxOrder
TremoloParser_IncreasedPrecision
TremoloParser_MultipleTimesteps
TremoloParser_setsAtomName
Ubuntu_1604_changes
stable
Last change
on this file since a61dbb was af5384, checked in by Frederik Heber <heber@…>, 11 years ago |
Actions can now clone() and split off prepare() from call().
- ActionQueue now separates call phase into clone(), prepare(), and call().
- ActionQueue's dstor releases Actions in deque.
- CurrentAction is an index as push_back always invalidates iterator.
- ActionQueue_t is now a simple vector of ptrs.
- call() is now non-interactive, (maybe) interactive part is placed in
prepare() where dialogs are used to fill parameters.
- only fully prepared Actions are placed in ActionQueue.
- ActionQueue obtains action instances from Registry, copies, prepares them,
and places them in the queue.
- Action::clone() gets QueryOptions as param. This lets us either clone without
params or really copy the instance.
- If action is called as COMMAND, params have been filled already.
- Reactions require a ActionQueue::getLastAction() to actually obtain result
of (cloned) Action.
- FIX: Calculation now has const has...() and getResult().
|
-
Property mode
set to
100644
|
File size:
795 bytes
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1 | /*
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2 | * AtomsCalculation.hpp
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3 | *
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4 | * Created on: Feb 19, 2010
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5 | * Author: crueger
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6 | */
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7 |
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8 | #ifndef ATOMSCALCULATION_HPP_
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9 | #define ATOMSCALCULATION_HPP_
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10 |
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11 | // include config.h
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12 | #ifdef HAVE_CONFIG_H
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13 | #include <config.h>
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14 | #endif
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15 |
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16 |
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17 | #include "Actions/Calculation.hpp"
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18 |
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19 | class Dialog;
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20 |
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21 | namespace MoleCuilder {
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22 |
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23 | template<typename T>
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24 | class AtomsCalculation : public Calculation<std::vector<T> >
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25 | {
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26 | public:
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27 | AtomsCalculation(boost::function<T(atom*)> op,const ActionTrait &_trait,AtomDescriptor descr);
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28 | virtual ~AtomsCalculation();
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29 |
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30 | Action* clone(enum Action::QueryOptions flag = Action::Interactive) const;
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31 |
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32 | protected:
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33 | virtual std::vector<T>* doCalc();
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34 | virtual Dialog *fillDialog(Dialog *dialog);
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35 |
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36 | private:
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37 | AtomDescriptor descr;
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38 | boost::function<T(atom*)> op;
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39 | };
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40 |
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41 | }
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42 |
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43 | #endif /* ATOMSCALCULATION_HPP_ */
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