| [bcf653] | 1 | /*
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 | 2 |  * Project: MoleCuilder
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 | 3 |  * Description: creates and alters molecular systems
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| [0aa122] | 4 |  * Copyright (C)  2010-2012 University of Bonn. All rights reserved.
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| [94d5ac6] | 5 |  * 
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 | 6 |  *
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 | 7 |  *   This file is part of MoleCuilder.
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 | 8 |  *
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 | 9 |  *    MoleCuilder is free software: you can redistribute it and/or modify
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 | 10 |  *    it under the terms of the GNU General Public License as published by
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 | 11 |  *    the Free Software Foundation, either version 2 of the License, or
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 | 12 |  *    (at your option) any later version.
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 | 13 |  *
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 | 14 |  *    MoleCuilder is distributed in the hope that it will be useful,
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 | 15 |  *    but WITHOUT ANY WARRANTY; without even the implied warranty of
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 | 16 |  *    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
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 | 17 |  *    GNU General Public License for more details.
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 | 18 |  *
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 | 19 |  *    You should have received a copy of the GNU General Public License
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 | 20 |  *    along with MoleCuilder.  If not, see <http://www.gnu.org/licenses/>.
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| [bcf653] | 21 |  */
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 | 22 | 
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| [97ebf8] | 23 | /*
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 | 24 |  * AddAction.cpp
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 | 25 |  *
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 | 26 |  *  Created on: May 9, 2010
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 | 27 |  *      Author: heber
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 | 28 |  */
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 | 29 | 
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| [bf3817] | 30 | // include config.h
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 | 31 | #ifdef HAVE_CONFIG_H
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 | 32 | #include <config.h>
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 | 33 | #endif
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 | 34 | 
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| [ad011c] | 35 | #include "CodePatterns/MemDebug.hpp"
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| [112b09] | 36 | 
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| [ea2830] | 37 | #include "Descriptors/AtomIdDescriptor.hpp"
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| [6f0841] | 38 | #include "Atom/atom.hpp"
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| [3bdb6d] | 39 | #include "Element/element.hpp"
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| [ad011c] | 40 | #include "CodePatterns/Log.hpp"
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| [f0a3ec] | 41 | #include "molecule.hpp"
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| [57f243] | 42 | #include "LinearAlgebra/Vector.hpp"
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| [ad011c] | 43 | #include "CodePatterns/Verbose.hpp"
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| [97ebf8] | 44 | #include "World.hpp"
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 | 45 | 
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 | 46 | #include <iostream>
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 | 47 | #include <string>
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 | 48 | 
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| [8bb05e] | 49 | #include "Actions/AtomAction/AddAction.hpp"
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| [9d33ba] | 50 | 
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| [ce7fdc] | 51 | using namespace MoleCuilder;
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 | 52 | 
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| [8bb05e] | 53 | // and construct the stuff
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 | 54 | #include "AddAction.def"
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 | 55 | #include "Action_impl_pre.hpp"
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 | 56 | /** =========== define the function ====================== */
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| [ceaab1] | 57 | 
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 | 58 | atom * getNewAtom(const AtomAddAction::AtomAddParameters &_params)
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 | 59 | {
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| [85537a] | 60 |   atom * first = World::getInstance().createAtom();
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| [ceaab1] | 61 |   first->setType(_params.elemental.get());
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 | 62 |   first->setPosition(_params.position.get());
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 | 63 | 
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 | 64 |   return first;
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 | 65 | }
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 | 66 | 
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| [8ad68b] | 67 | atom * regetNewAtom(const AtomAddAction::AtomAddParameters &_params, const atomId_t _id)
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 | 68 | {
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 | 69 |   atom * first = World::getInstance().recreateAtom(_id);
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 | 70 |   first->setType(_params.elemental.get());
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 | 71 |   first->setPosition(_params.position.get());
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 | 72 | 
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 | 73 |   return first;
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 | 74 | }
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 | 75 | 
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| [ceaab1] | 76 | std::vector<atomId_t> createAtoms(
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 | 77 |     const AtomAddAction::AtomAddParameters &_params,
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 | 78 |     std::vector<molecule *> &_molecules)
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 | 79 | {
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 | 80 |   std::vector<atomId_t> ids;
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 | 81 |   if (!_molecules.empty()) {
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 | 82 |     if (_molecules.size() == 1) {
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 | 83 |         atom *first = getNewAtom(_params);
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 | 84 |         molecule *mol = *_molecules.begin();
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 | 85 |         LOG(1, "Adding new atom with element " << first->getType()->getName()
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 | 86 |             << " at " << (first->getPosition()) << " to selected molecule "
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 | 87 |             << mol->getName()+".");
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 | 88 |         mol->AddAtom(first);
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 | 89 |       ids.push_back(first->getId());
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 | 90 |     }
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 | 91 |   } else {
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 | 92 |     atom *first = getNewAtom(_params);
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 | 93 |     molecule *mol = World::getInstance().createMolecule();
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 | 94 |     mol->setName("none");
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 | 95 |     mol->AddAtom(first);
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 | 96 |     LOG(1, "Adding new atom with element " << first->getType()->getName()
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 | 97 |         << " at " << (first->getPosition()) << " to new molecule.");
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 | 98 |     ids.push_back(first->getId());
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| [97ebf8] | 99 |   }
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| [ceaab1] | 100 | 
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 | 101 |   return ids;
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 | 102 | }
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 | 103 | 
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| [8ad68b] | 104 | std::vector<atomId_t> recreateAtoms(
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 | 105 |     const AtomAddAction::AtomAddParameters &_params,
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 | 106 |     const std::vector<atomId_t> &_ids,
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 | 107 |     std::vector<molecule *> &_molecules)
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 | 108 | {
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 | 109 |   molecule *mol = NULL;
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 | 110 |   if (!_molecules.empty()) {
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 | 111 |     ASSERT (_molecules.size() == 1,
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 | 112 |         "recreateAtoms() - more than one molecules given.");
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 | 113 |     mol = *_molecules.begin();
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 | 114 |   } else {
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 | 115 |     mol = World::getInstance().createMolecule();
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 | 116 |     mol->setName("none");
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 | 117 |   }
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 | 118 |   std::vector<atomId_t> newids;
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 | 119 |   for (std::vector<atomId_t>::const_iterator iter = _ids.begin();
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 | 120 |       iter != _ids.end(); ++iter) {
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 | 121 |     atom *first = regetNewAtom(_params, *iter);
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 | 122 |     if (first != NULL) {
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 | 123 |       newids.push_back(first->getId());
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 | 124 |       mol->AddAtom(first);
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 | 125 |       LOG(1, "Adding new atom with element " << first->getType()->getName()
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 | 126 |           << " at " << (first->getPosition()) << " to new molecule.");
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 | 127 |     } else {
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 | 128 |       ELOG(1, "Could not recreate atom with id " << *iter);
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 | 129 |       break;
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 | 130 |     }
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 | 131 |   }
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 | 132 | 
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 | 133 |   return newids;
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 | 134 | }
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 | 135 | 
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| [ceaab1] | 136 | ActionState::ptr AtomAddAction::performCall() {
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 | 137 |   // execute action
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 | 138 |   std::vector<molecule *> molecules = World::getInstance().getSelectedMolecules();
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 | 139 |   std::vector<atomId_t> ids = createAtoms(params, molecules);
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 | 140 | 
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 | 141 |   if (molecules.size() > 1)
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 | 142 |      return Action::failure;
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 | 143 |   else
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 | 144 |     return ActionState::ptr(new AtomAddState(ids, params));
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| [97ebf8] | 145 | }
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 | 146 | 
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| [b5b01e] | 147 | ActionState::ptr AtomAddAction::performUndo(ActionState::ptr _state) {
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| [ea2830] | 148 |   AtomAddState *state = assert_cast<AtomAddState*>(_state.get());
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| [97ebf8] | 149 | 
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| [ceaab1] | 150 |   for (std::vector<atomId_t>::const_iterator iter = state->ids.begin();
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 | 151 |       iter != state->ids.end(); ++iter) {
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 | 152 |     LOG(1, "Removing atom with id " << *iter << ".");
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 | 153 |     World::getInstance().destroyAtom(*iter);
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 | 154 |   }
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| [ea2830] | 155 | 
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| [b5b01e] | 156 |   return ActionState::ptr(_state);
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| [97ebf8] | 157 | }
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 | 158 | 
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| [b5b01e] | 159 | ActionState::ptr AtomAddAction::performRedo(ActionState::ptr _state){
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| [ea2830] | 160 |   AtomAddState *state = assert_cast<AtomAddState*>(_state.get());
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 | 161 | 
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| [ceaab1] | 162 |   std::vector<molecule *> molecules = World::getInstance().getSelectedMolecules();
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| [8ad68b] | 163 |   std::vector<atomId_t> newids = recreateAtoms(state->params, state->ids, molecules);
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| [ceaab1] | 164 |   if (newids.size() != state->ids.size()) {
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 | 165 |     STATUS("Could not recreate all atoms after undo.");
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 | 166 |     for (std::vector<atomId_t>::const_iterator iter = newids.begin(); iter != newids.end();++iter)
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 | 167 |       World::getInstance().destroyAtom(*iter);
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 | 168 |     return Action::failure;
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| [ea2830] | 169 |   }
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| [8ad68b] | 170 |   return ActionState::ptr(_state);
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| [97ebf8] | 171 | }
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 | 172 | 
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 | 173 | bool AtomAddAction::canUndo() {
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| [ea2830] | 174 |   return true;
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| [97ebf8] | 175 | }
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 | 176 | 
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 | 177 | bool AtomAddAction::shouldUndo() {
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| [ea2830] | 178 |   return true;
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| [97ebf8] | 179 | }
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| [8bb05e] | 180 | /** =========== end of function ====================== */
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