[bcf653] | 1 | /*
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| 2 | * Project: MoleCuilder
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| 3 | * Description: creates and alters molecular systems
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| 4 | * Copyright (C) 2010 University of Bonn. All rights reserved.
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| 5 | * Please see the LICENSE file or "Copyright notice" in builder.cpp for details.
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| 6 | */
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| 7 |
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[97ebf8] | 8 | /*
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| 9 | * PrincipalAxisSystemAction.cpp
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| 10 | *
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| 11 | * Created on: May 12, 2010
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| 12 | * Author: heber
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| 13 | */
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| 14 |
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[bf3817] | 15 | // include config.h
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| 16 | #ifdef HAVE_CONFIG_H
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| 17 | #include <config.h>
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| 18 | #endif
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| 19 |
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[ad011c] | 20 | #include "CodePatterns/MemDebug.hpp"
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[112b09] | 21 |
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[ad011c] | 22 | #include "CodePatterns/Log.hpp"
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| 23 | #include "CodePatterns/Verbose.hpp"
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[cca9ef] | 24 | #include "LinearAlgebra/RealSpaceMatrix.hpp"
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[6e5084] | 25 | #include "LinearAlgebra/Vector.hpp"
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| 26 | #include "element.hpp"
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| 27 | #include "molecule.hpp"
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[97ebf8] | 28 |
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| 29 | #include <iostream>
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| 30 | #include <string>
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| 31 |
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| 32 | using namespace std;
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| 33 |
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[9ee38b] | 34 | #include "Actions/AnalysisAction/PrincipalAxisSystemAction.hpp"
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[ca1ba5] | 35 |
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[9ee38b] | 36 | // and construct the stuff
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| 37 | #include "PrincipalAxisSystemAction.def"
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| 38 | #include "Action_impl_pre.hpp"
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[ca1ba5] | 39 |
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[9ee38b] | 40 | /** =========== define the function ====================== */
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[ca1ba5] | 41 | Action::state_ptr AnalysisPrincipalAxisSystemAction::performCall() {
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[cca9ef] | 42 | RealSpaceMatrix InertiaTensor;
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[97ebf8] | 43 |
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[ca1ba5] | 44 | DoLog(0) && (Log() << Verbose(0) << "Evaluating prinicipal axis." << endl);
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[b76394] | 45 | for (World::MoleculeSelectionIterator iter = World::getInstance().beginMoleculeSelection(); iter != World::getInstance().endMoleculeSelection(); ++iter) {
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| 46 | molecule *mol = iter->second;
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[6e5084] | 47 | Vector *CenterOfGravity = mol->DetermineCenterOfGravity();
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| 48 |
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| 49 | // reset inertia tensor
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[9eb7580] | 50 | InertiaTensor.setZero();
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[6e5084] | 51 |
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| 52 | // sum up inertia tensor
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| 53 | for (molecule::const_iterator iter = mol->begin(); iter != mol->end(); ++iter) {
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[8f4df1] | 54 | Vector x = (*iter)->getPosition();
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[6e5084] | 55 | x -= *CenterOfGravity;
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[83f176] | 56 | const double mass = (*iter)->getType()->getMass();
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[8f4df1] | 57 | InertiaTensor.at(0,0) += mass*(x[1]*x[1] + x[2]*x[2]);
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| 58 | InertiaTensor.at(0,1) += mass*(-x[0]*x[1]);
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| 59 | InertiaTensor.at(0,2) += mass*(-x[0]*x[2]);
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| 60 | InertiaTensor.at(1,0) += mass*(-x[1]*x[0]);
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| 61 | InertiaTensor.at(1,1) += mass*(x[0]*x[0] + x[2]*x[2]);
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| 62 | InertiaTensor.at(1,2) += mass*(-x[1]*x[2]);
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| 63 | InertiaTensor.at(2,0) += mass*(-x[2]*x[0]);
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| 64 | InertiaTensor.at(2,1) += mass*(-x[2]*x[1]);
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| 65 | InertiaTensor.at(2,2) += mass*(x[0]*x[0] + x[1]*x[1]);
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[6e5084] | 66 | }
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| 67 | // print InertiaTensor for debugging
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| 68 | DoLog(0) && (Log() << Verbose(0) << "The inertia tensor is:" << InertiaTensor << endl);
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[b76394] | 69 | }
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[ca1ba5] | 70 | return Action::success;
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[97ebf8] | 71 | }
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| 72 |
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| 73 | Action::state_ptr AnalysisPrincipalAxisSystemAction::performUndo(Action::state_ptr _state) {
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[ca1ba5] | 74 | return Action::success;
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[97ebf8] | 75 | }
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| 76 |
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| 77 | Action::state_ptr AnalysisPrincipalAxisSystemAction::performRedo(Action::state_ptr _state){
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[ca1ba5] | 78 | return Action::success;
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[97ebf8] | 79 | }
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| 80 |
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| 81 | bool AnalysisPrincipalAxisSystemAction::canUndo() {
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[ca1ba5] | 82 | return true;
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[97ebf8] | 83 | }
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| 84 |
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| 85 | bool AnalysisPrincipalAxisSystemAction::shouldUndo() {
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[ca1ba5] | 86 | return true;
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[97ebf8] | 87 | }
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[9ee38b] | 88 | /** =========== end of function ====================== */
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