| 1 | /* | 
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| 2 | * Project: MoleCuilder | 
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| 3 | * Description: creates and alters molecular systems | 
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| 4 | * Copyright (C)  2010-2012 University of Bonn. All rights reserved. | 
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| 5 | * | 
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| 6 | * | 
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| 7 | *   This file is part of MoleCuilder. | 
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| 8 | * | 
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| 9 | *    MoleCuilder is free software: you can redistribute it and/or modify | 
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| 10 | *    it under the terms of the GNU General Public License as published by | 
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| 11 | *    the Free Software Foundation, either version 2 of the License, or | 
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| 12 | *    (at your option) any later version. | 
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| 13 | * | 
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| 14 | *    MoleCuilder is distributed in the hope that it will be useful, | 
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| 15 | *    but WITHOUT ANY WARRANTY; without even the implied warranty of | 
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| 16 | *    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | 
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| 17 | *    GNU General Public License for more details. | 
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| 18 | * | 
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| 19 | *    You should have received a copy of the GNU General Public License | 
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| 20 | *    along with MoleCuilder.  If not, see <http://www.gnu.org/licenses/>. | 
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| 21 | */ | 
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| 22 |  | 
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| 23 | /* | 
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| 24 | * CalculateMolarMassAction.cpp | 
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| 25 | * | 
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| 26 | *  Created on: Nov 02, 2011 | 
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| 27 | *      Author: heber | 
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| 28 | */ | 
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| 29 |  | 
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| 30 | // include config.h | 
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| 31 | #ifdef HAVE_CONFIG_H | 
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| 32 | #include <config.h> | 
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| 33 | #endif | 
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| 34 |  | 
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| 35 | #include "CodePatterns/MemDebug.hpp" | 
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| 36 |  | 
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| 37 | #include "CodePatterns/Log.hpp" | 
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| 38 |  | 
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| 39 | #include "Atom/atom.hpp" | 
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| 40 | #include "Element/element.hpp" | 
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| 41 | #include "World.hpp" | 
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| 42 |  | 
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| 43 | #include <iostream> | 
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| 44 | #include <string> | 
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| 45 |  | 
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| 46 | #include "CalculateMolarMassAction.hpp" | 
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| 47 |  | 
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| 48 | using namespace MoleCuilder; | 
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| 49 |  | 
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| 50 | // and construct the stuff | 
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| 51 | #include "CalculateMolarMassAction.def" | 
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| 52 | #include "Reaction_impl_pre.hpp" | 
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| 53 |  | 
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| 54 | #include "Reaction_impl.hpp" | 
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| 55 |  | 
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| 56 | /** =========== define the function ====================== */ | 
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| 57 | double * AnalysisCalculateMolarMassAction::doCalc() { | 
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| 58 | double mass = 0.; | 
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| 59 | size_t totalnumber = 0; | 
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| 60 | // calculate volume from Box | 
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| 61 | for(World::AtomSelectionConstIterator iter = World::getInstance().beginAtomSelection(); | 
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| 62 | iter != World::getInstance().endAtomSelection(); | 
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| 63 | ++iter) { | 
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| 64 | mass += iter->second->getType()->getMass(); | 
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| 65 | ++totalnumber; | 
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| 66 | } | 
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| 67 | LOG(0, "RESULT: The mass of " << totalnumber << " selected atoms is " << mass << " atomicmassunit."); | 
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| 68 |  | 
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| 69 | return (new double(mass)); | 
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| 70 | } | 
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| 71 | /** =========== end of function ====================== */ | 
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