source: configure.ac@ 54a746

Action_Thermostats Add_AtomRandomPerturbation Add_FitFragmentPartialChargesAction Add_RotateAroundBondAction Add_SelectAtomByNameAction Added_ParseSaveFragmentResults AddingActions_SaveParseParticleParameters Adding_Graph_to_ChangeBondActions Adding_MD_integration_tests Adding_ParticleName_to_Atom Adding_StructOpt_integration_tests AtomFragments Automaking_mpqc_open AutomationFragmentation_failures Candidate_v1.5.4 Candidate_v1.6.0 Candidate_v1.6.1 ChangeBugEmailaddress ChangingTestPorts ChemicalSpaceEvaluator CombiningParticlePotentialParsing Combining_Subpackages Debian_Package_split Debian_package_split_molecuildergui_only Disabling_MemDebug Docu_Python_wait EmpiricalPotential_contain_HomologyGraph EmpiricalPotential_contain_HomologyGraph_documentation Enable_parallel_make_install Enhance_userguide Enhanced_StructuralOptimization Enhanced_StructuralOptimization_continued Example_ManyWaysToTranslateAtom Exclude_Hydrogens_annealWithBondGraph FitPartialCharges_GlobalError Fix_BoundInBox_CenterInBox_MoleculeActions Fix_ChargeSampling_PBC Fix_ChronosMutex Fix_FitPartialCharges Fix_FitPotential_needs_atomicnumbers Fix_ForceAnnealing Fix_IndependentFragmentGrids Fix_ParseParticles Fix_ParseParticles_split_forward_backward_Actions Fix_PopActions Fix_QtFragmentList_sorted_selection Fix_Restrictedkeyset_FragmentMolecule Fix_StatusMsg Fix_StepWorldTime_single_argument Fix_Verbose_Codepatterns Fix_fitting_potentials Fixes ForceAnnealing_goodresults ForceAnnealing_oldresults ForceAnnealing_tocheck ForceAnnealing_with_BondGraph ForceAnnealing_with_BondGraph_continued ForceAnnealing_with_BondGraph_continued_betteresults ForceAnnealing_with_BondGraph_contraction-expansion FragmentAction_writes_AtomFragments FragmentMolecule_checks_bonddegrees GeometryObjects Gui_Fixes Gui_displays_atomic_force_velocity ImplicitCharges IndependentFragmentGrids IndependentFragmentGrids_IndividualZeroInstances IndependentFragmentGrids_IntegrationTest IndependentFragmentGrids_Sole_NN_Calculation JobMarket_RobustOnKillsSegFaults JobMarket_StableWorkerPool JobMarket_unresolvable_hostname_fix MoreRobust_FragmentAutomation ODR_violation_mpqc_open PartialCharges_OrthogonalSummation PdbParser_setsAtomName PythonUI_with_named_parameters QtGui_reactivate_TimeChanged_changes Recreated_GuiChecks Rewrite_FitPartialCharges RotateToPrincipalAxisSystem_UndoRedo SaturateAtoms_findBestMatching SaturateAtoms_singleDegree StoppableMakroAction Subpackage_CodePatterns Subpackage_JobMarket Subpackage_LinearAlgebra Subpackage_levmar Subpackage_mpqc_open Subpackage_vmg Switchable_LogView ThirdParty_MPQC_rebuilt_buildsystem TrajectoryDependenant_MaxOrder TremoloParser_IncreasedPrecision TremoloParser_MultipleTimesteps TremoloParser_setsAtomName Ubuntu_1604_changes stable
Last change on this file since 54a746 was 54a746, checked in by Frederik Heber <heber@…>, 15 years ago

Incorporation of Unit test on class Vector.

  • new file leastsquaremin.[ch]pp has least square minimisation which is otherwise unclean between classes molecules and Vector

Unit test (later tests rely on good results of earlier ones)

changes to class Vector:

  • Vector::IsNull() -> IsZero()
  • new function Vector::IsOne() similar to IsZero()
  • BUGFIX: Vector::IsNULL() (thx to unit test :)
  • Tesselation::getAngle() changed due to above rename
  • Property mode set to 100755
File size: 2.6 KB
Line 
1# -*- Autoconf -*-
2# Process this file with autoconf to produce a configure script.
3
4AC_PREREQ(2.59)
5AC_INIT(Molecuilder, 1.0, heber@ins.uni-bonn.de, molecuilder)
6AC_CONFIG_AUX_DIR(config)
7AC_CONFIG_SRCDIR([src/builder.cpp])
8AC_CONFIG_HEADER([config.h])
9
10AM_INIT_AUTOMAKE(dist-bzip2)
11
12# Checks for programs.
13AM_PATH_CPPUNIT(1.9.6)
14AC_PROG_CXX
15AC_PROG_CC
16AC_PROG_INSTALL
17AC_CHECK_PROG([LATEX],[latex],[latex],[:])
18AC_CHECK_PROG([BIBTEX],[bibtex],[bibtex],[:])
19AC_CHECK_PROG([DVIPS],[dvips],[dvips],[:])
20AC_CHECK_PROG([PDFLATEX],[pdflatex],[pdflatex],[:])
21AC_CHECK_PROG([XMLTO],[xmlto],[xmlto],[:])
22AM_MISSING_PROG([DOXYGEN], [doxygen])
23
24# Checks for libraries.
25AC_CHECK_LIB(m, sqrt, ,AC_MSG_ERROR([compatible libc math library not found]))
26
27# Checks for header files.
28AC_HEADER_STDC
29AC_CHECK_HEADERS([sys/time.h])
30AC_HEADER_STDBOOL
31
32AC_FUNC_MALLOC
33AC_FUNC_REALLOC
34AC_CHECK_FUNCS([floor pow sqrt strchr])
35
36# Checks for typedefs, structures, and compiler characteristics.
37AC_C_CONST
38AC_C_INLINE
39AC_C_RESTRICT
40AC_TYPE_SIZE_T
41
42# Checks for library functions.
43# check for GNU Scientific Library
44AC_CHECK_HEADERS([gsl/gsl_blas.h])
45AC_SEARCH_LIBS(dnrm2, goto blas cblas gslblas gslcblas)
46AC_CHECK_LIB(gsl, main, [],
47 [AC_SEARCH_LIBS(cblas_dnrm2, blas cblas gslblas gslcblas)])
48AC_CHECK_LIB(gsl, gsl_blas_dnrm2, , [AC_MSG_ERROR(["No working BLAS found for GSL, stopping."])])
49
50# add replacement/saturation hydrogen or not
51AC_ARG_ENABLE([hydrogen],AS_HELP_STRING([--enable-hydrogen],[Adding saturation hydrogen (default is yes)]),
52 [enable_hydrogen=$enableval], [enable_hydrogen=yes])
53if test x"$enable_hydrogen" = xyes; then
54 AC_DEFINE(ADDHYDROGEN,1, ["Adding saturation hydrogen"])
55 AC_SUBST(ADDHYDROGEN)
56fi
57
58# Check for "extern inline", using a modified version
59# of the test for AC_C_INLINE from acspecific.mt
60AC_CACHE_CHECK([for extern inline], ac_cv_c_extern_inline,
61[ac_cv_c_extern_inline=no
62AC_TRY_COMPILE([extern $ac_cv_c_inline double foo(double x);
63extern $ac_cv_c_inline double foo(double x) { return x+1.0; };
64double foo (double x) { return x + 1.0; };],
65[ foo(1.0) ],
66[ac_cv_c_extern_inline="yes"])
67])
68
69if test "$ac_cv_c_inline" != no ; then
70 AC_DEFINE(HAVE_INLINE,1, ["May use inline routines"])
71 AC_SUBST(HAVE_INLINE)
72fi
73
74#AC_MSG_NOTICE(["CFLAGS: $CFLAGS, CXXFLAGS: $CXXFLAGS, LDFLAGS: $LDFLAGS, CC: $CC, CXX:, $CXX, MPICC: $MPICC, MPILIBS: $MPILIBS, LIBS: $LIBS"])
75
76# test suite
77AC_CONFIG_TESTDIR(tests)
78AC_CONFIG_FILES([tests/atlocal tests/Makefile])
79AC_CONFIG_FILES([tests/molecuilder], [chmod +x tests/molecuilder])
80AC_CONFIG_FILES([doc/molecuilder.xml])
81AC_CONFIG_FILES([Makefile src/Makefile doc/Makefile])
82AC_OUTPUT
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